Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_B02
(876 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X59268-1|CAA41958.1| 316|Homo sapiens IIB protein protein. 346 6e-95
M76766-1|AAA61149.1| 316|Homo sapiens transcription factor prot... 346 6e-95
BC021000-1|AAH21000.1| 316|Homo sapiens general transcription f... 346 6e-95
BC020597-1|AAH20597.1| 316|Homo sapiens general transcription f... 346 6e-95
AL445991-4|CAI41341.1| 316|Homo sapiens general transcription f... 346 6e-95
AL445991-3|CAI41342.1| 224|Homo sapiens general transcription f... 346 6e-95
S44184-1|AAB23144.1| 311|Homo sapiens S300-II protein. 337 3e-92
AL445991-5|CAI41343.1| 231|Homo sapiens general transcription f... 329 9e-90
U75276-1|AAB38876.1| 677|Homo sapiens TFIIB related factor hBRF... 58 6e-08
U28838-1|AAC50170.1| 675|Homo sapiens TFIIIB 90 kDa subunit pro... 54 7e-07
BC016743-1|AAH16743.1| 208|Homo sapiens BRF1 protein protein. 50 8e-06
BC086856-1|AAH86856.1| 650|Homo sapiens BRF1 protein protein. 50 1e-05
AJ297408-1|CAC04514.1| 222|Homo sapiens transcription factor II... 50 1e-05
BC010648-1|AAH10648.1| 419|Homo sapiens BRF2, subunit of RNA po... 34 0.59
AF298153-1|AAG30222.1| 419|Homo sapiens RNA polymerase III tran... 34 0.59
AF206673-1|AAG35669.2| 419|Homo sapiens TFIIIB50 protein. 34 0.59
AK001914-1|BAA91975.1| 419|Homo sapiens protein ( Homo sapiens ... 33 1.0
AK223366-1|BAD97086.1| 191|Homo sapiens programmed cell death 6... 31 4.1
L14812-1|AAA02489.1| 1068|Homo sapiens p107 protein. 31 5.5
BC032247-1|AAH32247.1| 1014|Homo sapiens retinoblastoma-like 1 (... 31 5.5
BC026272-1|AAH26272.1| 176|Homo sapiens CCNC protein protein. 31 5.5
AL391114-2|CAI95152.1| 1014|Homo sapiens retinoblastoma-like 1 (... 31 5.5
AL391114-1|CAI95151.1| 1068|Homo sapiens retinoblastoma-like 1 (... 31 5.5
AL365505-2|CAI95178.1| 1014|Homo sapiens retinoblastoma-like 1 (... 31 5.5
AL365505-1|CAI95177.1| 1068|Homo sapiens retinoblastoma-like 1 (... 31 5.5
AL137784-5|CAI19762.1| 143|Homo sapiens cyclin C protein. 31 5.5
AL136172-4|CAI95717.1| 1014|Homo sapiens retinoblastoma-like 1 (... 31 5.5
AL136172-3|CAI95716.1| 1068|Homo sapiens retinoblastoma-like 1 (... 31 5.5
AB058717-1|BAB47443.1| 1285|Homo sapiens KIAA1814 protein protein. 31 5.5
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 31 7.2
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 31 7.2
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 31 7.2
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 31 7.2
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 31 7.2
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 31 7.2
AJ298319-1|CAC83676.1| 372|Homo sapiens mucin 5 protein. 31 7.2
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 7.2
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 31 7.2
U58773-1|AAF14336.1| 191|Homo sapiens calcium binding protein p... 30 9.6
BX664726-3|CAI17100.1| 1347|Homo sapiens family with sequence si... 30 9.6
BX005214-2|CAH72787.1| 1347|Homo sapiens family with sequence si... 30 9.6
BT020072-1|AAV38875.1| 191|Homo sapiens programmed cell death 6... 30 9.6
BC106706-1|AAI06707.1| 191|Homo sapiens programmed cell death 6... 30 9.6
BC066643-1|AAH66643.1| 1202|Homo sapiens CASK interacting protei... 30 9.6
BC012384-1|AAH12384.1| 191|Homo sapiens programmed cell death 6... 30 9.6
AY633626-1|AAT46480.1| 372|Homo sapiens mitogen-activated prote... 30 9.6
AY633625-1|AAT46479.1| 522|Homo sapiens mitogen-activated prote... 30 9.6
AY633624-1|AAT46478.1| 486|Homo sapiens mitogen-activated prote... 30 9.6
AL445584-1|CAH73043.1| 1343|Homo sapiens family with sequence si... 30 9.6
AF451976-1|AAL49757.1| 1202|Homo sapiens cask-interacting protei... 30 9.6
AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein. 30 9.6
AF035606-1|AAC27697.1| 191|Homo sapiens calcium binding protein... 30 9.6
AB065629-1|BAC05855.1| 276|Homo sapiens seven transmembrane hel... 30 9.6
AB032965-1|BAA86453.1| 1124|Homo sapiens KIAA1139 protein protein. 30 9.6
>X59268-1|CAA41958.1| 316|Homo sapiens IIB protein protein.
Length = 316
Score = 346 bits (851), Expect = 6e-95
Identities = 166/206 (80%), Positives = 184/206 (89%), Gaps = 1/206 (0%)
Frame = +2
Query: 71 MASTSRIEA-NKVVCYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKS 247
MASTSR++A +V C HPDA L+EDYRAGDMIC ECGLVVGDRVIDVGSEWRTFSN+K+
Sbjct: 1 MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA 60
Query: 248 GVDPSRVGGPENPLLSGGDLSTIIGPGRGDASFDSFGVSKYQNRRNISSTDRALINAFRE 427
DPSRVG +NPLLS GDLST+IG G G ASFD FG SKYQNRR +SS+DRA++NAF+E
Sbjct: 61 TKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE 120
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEI 607
I TMADRINLP+ IVDR NNLFKQV++ K+LKGRANDAIASACLYIACRQEGVPRTFKEI
Sbjct: 121 ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI 180
Query: 608 CAVSKISKKEIGRCFKLILKALETSV 685
CAVS+ISKKEIGRCFKLILKALETSV
Sbjct: 181 CAVSRISKKEIGRCFKLILKALETSV 206
Score = 51.2 bits (117), Expect = 5e-06
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +1
Query: 721 FCSNLGLPNSVQRAATHIARKAGELDIVSGKS 816
FCSNL LP VQ AATHIARKA ELD+V G+S
Sbjct: 218 FCSNLCLPKQVQMAATHIARKAVELDLVPGRS 249
Score = 33.9 bits (74), Expect = 0.78
Identities = 18/69 (26%), Positives = 39/69 (56%)
Frame = +2
Query: 455 LPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEICAVSKISKK 634
LPK + A ++ ++ + + GR+ ++A+A +Y+A + RT KEI ++ ++
Sbjct: 224 LPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADV 283
Query: 635 EIGRCFKLI 661
I + ++LI
Sbjct: 284 TIRQSYRLI 292
Score = 32.7 bits (71), Expect = 1.8
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = +3
Query: 687 DLITTADFMSRVLLEFGSAKFSATRSYTYRKESWRAGHSVWKKSISVAAAAIYMA 851
DLITT DFMSR K + +++ + ISVAAAAIYMA
Sbjct: 207 DLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMA 261
>M76766-1|AAA61149.1| 316|Homo sapiens transcription factor
protein.
Length = 316
Score = 346 bits (851), Expect = 6e-95
Identities = 166/206 (80%), Positives = 184/206 (89%), Gaps = 1/206 (0%)
Frame = +2
Query: 71 MASTSRIEA-NKVVCYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKS 247
MASTSR++A +V C HPDA L+EDYRAGDMIC ECGLVVGDRVIDVGSEWRTFSN+K+
Sbjct: 1 MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA 60
Query: 248 GVDPSRVGGPENPLLSGGDLSTIIGPGRGDASFDSFGVSKYQNRRNISSTDRALINAFRE 427
DPSRVG +NPLLS GDLST+IG G G ASFD FG SKYQNRR +SS+DRA++NAF+E
Sbjct: 61 TKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE 120
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEI 607
I TMADRINLP+ IVDR NNLFKQV++ K+LKGRANDAIASACLYIACRQEGVPRTFKEI
Sbjct: 121 ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI 180
Query: 608 CAVSKISKKEIGRCFKLILKALETSV 685
CAVS+ISKKEIGRCFKLILKALETSV
Sbjct: 181 CAVSRISKKEIGRCFKLILKALETSV 206
Score = 51.2 bits (117), Expect = 5e-06
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +1
Query: 721 FCSNLGLPNSVQRAATHIARKAGELDIVSGKS 816
FCSNL LP VQ AATHIARKA ELD+V G+S
Sbjct: 218 FCSNLCLPKQVQMAATHIARKAVELDLVPGRS 249
Score = 33.9 bits (74), Expect = 0.78
Identities = 18/69 (26%), Positives = 39/69 (56%)
Frame = +2
Query: 455 LPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEICAVSKISKK 634
LPK + A ++ ++ + + GR+ ++A+A +Y+A + RT KEI ++ ++
Sbjct: 224 LPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADV 283
Query: 635 EIGRCFKLI 661
I + ++LI
Sbjct: 284 TIRQSYRLI 292
Score = 32.7 bits (71), Expect = 1.8
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = +3
Query: 687 DLITTADFMSRVLLEFGSAKFSATRSYTYRKESWRAGHSVWKKSISVAAAAIYMA 851
DLITT DFMSR K + +++ + ISVAAAAIYMA
Sbjct: 207 DLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMA 261
>BC021000-1|AAH21000.1| 316|Homo sapiens general transcription
factor IIB protein.
Length = 316
Score = 346 bits (851), Expect = 6e-95
Identities = 166/206 (80%), Positives = 184/206 (89%), Gaps = 1/206 (0%)
Frame = +2
Query: 71 MASTSRIEA-NKVVCYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKS 247
MASTSR++A +V C HPDA L+EDYRAGDMIC ECGLVVGDRVIDVGSEWRTFSN+K+
Sbjct: 1 MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA 60
Query: 248 GVDPSRVGGPENPLLSGGDLSTIIGPGRGDASFDSFGVSKYQNRRNISSTDRALINAFRE 427
DPSRVG +NPLLS GDLST+IG G G ASFD FG SKYQNRR +SS+DRA++NAF+E
Sbjct: 61 TKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE 120
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEI 607
I TMADRINLP+ IVDR NNLFKQV++ K+LKGRANDAIASACLYIACRQEGVPRTFKEI
Sbjct: 121 ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI 180
Query: 608 CAVSKISKKEIGRCFKLILKALETSV 685
CAVS+ISKKEIGRCFKLILKALETSV
Sbjct: 181 CAVSRISKKEIGRCFKLILKALETSV 206
Score = 51.2 bits (117), Expect = 5e-06
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +1
Query: 721 FCSNLGLPNSVQRAATHIARKAGELDIVSGKS 816
FCSNL LP VQ AATHIARKA ELD+V G+S
Sbjct: 218 FCSNLCLPKQVQMAATHIARKAVELDLVPGRS 249
Score = 33.9 bits (74), Expect = 0.78
Identities = 18/69 (26%), Positives = 39/69 (56%)
Frame = +2
Query: 455 LPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEICAVSKISKK 634
LPK + A ++ ++ + + GR+ ++A+A +Y+A + RT KEI ++ ++
Sbjct: 224 LPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADV 283
Query: 635 EIGRCFKLI 661
I + ++LI
Sbjct: 284 TIRQSYRLI 292
Score = 32.7 bits (71), Expect = 1.8
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = +3
Query: 687 DLITTADFMSRVLLEFGSAKFSATRSYTYRKESWRAGHSVWKKSISVAAAAIYMA 851
DLITT DFMSR K + +++ + ISVAAAAIYMA
Sbjct: 207 DLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMA 261
>BC020597-1|AAH20597.1| 316|Homo sapiens general transcription
factor IIB protein.
Length = 316
Score = 346 bits (851), Expect = 6e-95
Identities = 166/206 (80%), Positives = 184/206 (89%), Gaps = 1/206 (0%)
Frame = +2
Query: 71 MASTSRIEA-NKVVCYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKS 247
MASTSR++A +V C HPDA L+EDYRAGDMIC ECGLVVGDRVIDVGSEWRTFSN+K+
Sbjct: 1 MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA 60
Query: 248 GVDPSRVGGPENPLLSGGDLSTIIGPGRGDASFDSFGVSKYQNRRNISSTDRALINAFRE 427
DPSRVG +NPLLS GDLST+IG G G ASFD FG SKYQNRR +SS+DRA++NAF+E
Sbjct: 61 TKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE 120
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEI 607
I TMADRINLP+ IVDR NNLFKQV++ K+LKGRANDAIASACLYIACRQEGVPRTFKEI
Sbjct: 121 ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI 180
Query: 608 CAVSKISKKEIGRCFKLILKALETSV 685
CAVS+ISKKEIGRCFKLILKALETSV
Sbjct: 181 CAVSRISKKEIGRCFKLILKALETSV 206
Score = 51.2 bits (117), Expect = 5e-06
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +1
Query: 721 FCSNLGLPNSVQRAATHIARKAGELDIVSGKS 816
FCSNL LP VQ AATHIARKA ELD+V G+S
Sbjct: 218 FCSNLCLPKQVQMAATHIARKAVELDLVPGRS 249
Score = 33.9 bits (74), Expect = 0.78
Identities = 18/69 (26%), Positives = 39/69 (56%)
Frame = +2
Query: 455 LPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEICAVSKISKK 634
LPK + A ++ ++ + + GR+ ++A+A +Y+A + RT KEI ++ ++
Sbjct: 224 LPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADV 283
Query: 635 EIGRCFKLI 661
I + ++LI
Sbjct: 284 TIRQSYRLI 292
Score = 32.7 bits (71), Expect = 1.8
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = +3
Query: 687 DLITTADFMSRVLLEFGSAKFSATRSYTYRKESWRAGHSVWKKSISVAAAAIYMA 851
DLITT DFMSR K + +++ + ISVAAAAIYMA
Sbjct: 207 DLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMA 261
>AL445991-4|CAI41341.1| 316|Homo sapiens general transcription
factor IIB protein.
Length = 316
Score = 346 bits (851), Expect = 6e-95
Identities = 166/206 (80%), Positives = 184/206 (89%), Gaps = 1/206 (0%)
Frame = +2
Query: 71 MASTSRIEA-NKVVCYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKS 247
MASTSR++A +V C HPDA L+EDYRAGDMIC ECGLVVGDRVIDVGSEWRTFSN+K+
Sbjct: 1 MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKA 60
Query: 248 GVDPSRVGGPENPLLSGGDLSTIIGPGRGDASFDSFGVSKYQNRRNISSTDRALINAFRE 427
DPSRVG +NPLLS GDLST+IG G G ASFD FG SKYQNRR +SS+DRA++NAF+E
Sbjct: 61 TKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE 120
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEI 607
I TMADRINLP+ IVDR NNLFKQV++ K+LKGRANDAIASACLYIACRQEGVPRTFKEI
Sbjct: 121 ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI 180
Query: 608 CAVSKISKKEIGRCFKLILKALETSV 685
CAVS+ISKKEIGRCFKLILKALETSV
Sbjct: 181 CAVSRISKKEIGRCFKLILKALETSV 206
Score = 51.2 bits (117), Expect = 5e-06
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +1
Query: 721 FCSNLGLPNSVQRAATHIARKAGELDIVSGKS 816
FCSNL LP VQ AATHIARKA ELD+V G+S
Sbjct: 218 FCSNLCLPKQVQMAATHIARKAVELDLVPGRS 249
Score = 33.9 bits (74), Expect = 0.78
Identities = 18/69 (26%), Positives = 39/69 (56%)
Frame = +2
Query: 455 LPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEICAVSKISKK 634
LPK + A ++ ++ + + GR+ ++A+A +Y+A + RT KEI ++ ++
Sbjct: 224 LPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADV 283
Query: 635 EIGRCFKLI 661
I + ++LI
Sbjct: 284 TIRQSYRLI 292
Score = 32.7 bits (71), Expect = 1.8
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = +3
Query: 687 DLITTADFMSRVLLEFGSAKFSATRSYTYRKESWRAGHSVWKKSISVAAAAIYMA 851
DLITT DFMSR K + +++ + ISVAAAAIYMA
Sbjct: 207 DLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMA 261
>AL445991-3|CAI41342.1| 224|Homo sapiens general transcription
factor IIB protein.
Length = 224
Score = 346 bits (851), Expect = 6e-95
Identities = 168/224 (75%), Positives = 187/224 (83%), Gaps = 1/224 (0%)
Frame = +2
Query: 74 ASTSRIEA-NKVVCYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSG 250
ASTSR++A +V C HPDA L+EDYRAGDMIC ECGLVVGDRVIDVGSEWRTFSN+K+
Sbjct: 1 ASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKAT 60
Query: 251 VDPSRVGGPENPLLSGGDLSTIIGPGRGDASFDSFGVSKYQNRRNISSTDRALINAFREI 430
DPSRVG +NPLLS GDLST+IG G G ASFD FG SKYQNRR +SS+DRA++NAF+EI
Sbjct: 61 KDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKEI 120
Query: 431 NTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEIC 610
TMADRINLP+ IVDR NNLFKQV++ K+LKGRANDAIASACLYIACRQEGVPRTFKEIC
Sbjct: 121 TTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEIC 180
Query: 611 AVSKISKKEIGRCFKLILKALETSV*SHYNSRFYVSGFARIWVC 742
AVS+ISKKEIGRCFKLILKALETSV F + W C
Sbjct: 181 AVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRNWRYCWCC 224
>S44184-1|AAB23144.1| 311|Homo sapiens S300-II protein.
Length = 311
Score = 337 bits (829), Expect = 3e-92
Identities = 159/195 (81%), Positives = 175/195 (89%)
Frame = +2
Query: 101 KVVCYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPE 280
+V C HPDA L+EDYRAGDMIC ECGLVVGDRVIDVGSEWRTFSN+K+ DPSRVG +
Sbjct: 7 RVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNDKATKDPSRVGDSQ 66
Query: 281 NPLLSGGDLSTIIGPGRGDASFDSFGVSKYQNRRNISSTDRALINAFREINTMADRINLP 460
NPLLS GDLST+IG G G ASFD FG SKYQNRR +SS+DRA++NAF+EI TMADRINLP
Sbjct: 67 NPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKEITTMADRINLP 126
Query: 461 KTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEICAVSKISKKEI 640
+ IVDR NNLFKQV++ K+LKGRANDAIASACLYIACRQEGVPRTFKEICAVS+ISKKEI
Sbjct: 127 RNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEI 186
Query: 641 GRCFKLILKALETSV 685
GRCFKLILKALETSV
Sbjct: 187 GRCFKLILKALETSV 201
Score = 51.2 bits (117), Expect = 5e-06
Identities = 24/32 (75%), Positives = 26/32 (81%)
Frame = +1
Query: 721 FCSNLGLPNSVQRAATHIARKAGELDIVSGKS 816
FCSNL LP VQ AATHIARKA ELD+V G+S
Sbjct: 213 FCSNLCLPKQVQMAATHIARKAVELDLVPGRS 244
Score = 33.9 bits (74), Expect = 0.78
Identities = 18/69 (26%), Positives = 39/69 (56%)
Frame = +2
Query: 455 LPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEICAVSKISKK 634
LPK + A ++ ++ + + GR+ ++A+A +Y+A + RT KEI ++ ++
Sbjct: 219 LPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQKEIGDIAGVADV 278
Query: 635 EIGRCFKLI 661
I + ++LI
Sbjct: 279 TIRQSYRLI 287
Score = 32.7 bits (71), Expect = 1.8
Identities = 22/55 (40%), Positives = 27/55 (49%)
Frame = +3
Query: 687 DLITTADFMSRVLLEFGSAKFSATRSYTYRKESWRAGHSVWKKSISVAAAAIYMA 851
DLITT DFMSR K + +++ + ISVAAAAIYMA
Sbjct: 202 DLITTGDFMSRFCSNLCLPKQVQMAATHIARKAVELDLVPGRSPISVAAAAIYMA 256
>AL445991-5|CAI41343.1| 231|Homo sapiens general transcription
factor IIB protein.
Length = 231
Score = 329 bits (808), Expect = 9e-90
Identities = 161/206 (78%), Positives = 179/206 (86%), Gaps = 1/206 (0%)
Frame = +2
Query: 71 MASTSRIEA-NKVVCYAHPDAPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKS 247
MASTSR++A +V C HPDA L+EDYRAGDMIC EC DRVIDVGSEWRTFSN+K+
Sbjct: 1 MASTSRLDALPRVTCPNHPDAILVEDYRAGDMICPEC-----DRVIDVGSEWRTFSNDKA 55
Query: 248 GVDPSRVGGPENPLLSGGDLSTIIGPGRGDASFDSFGVSKYQNRRNISSTDRALINAFRE 427
DPSRVG +NPLLS GDLST+IG G G ASFD FG SKYQNRR +SS+DRA++NAF+E
Sbjct: 56 TKDPSRVGDSQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE 115
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEI 607
I TMADRINLP+ IVDR NNLFKQV++ K+LKGRANDAIASACLYIACRQEGVPRTFKEI
Sbjct: 116 ITTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFKEI 175
Query: 608 CAVSKISKKEIGRCFKLILKALETSV 685
CAVS+ISKKEIGRCFKLILKALETSV
Sbjct: 176 CAVSRISKKEIGRCFKLILKALETSV 201
Score = 33.9 bits (74), Expect = 0.78
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1
Query: 721 FCSNLGLPNSVQRAATHIA 777
FCSNL LP VQ AATHIA
Sbjct: 213 FCSNLCLPKQVQMAATHIA 231
>U75276-1|AAB38876.1| 677|Homo sapiens TFIIB related factor hBRF
protein.
Length = 677
Score = 57.6 bits (133), Expect = 6e-08
Identities = 49/177 (27%), Positives = 81/177 (45%)
Frame = +2
Query: 143 DYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGGDLSTIIG 322
D GD +C+ CG V+ D +I SE + E SG S VG + L G + +G
Sbjct: 17 DAARGDAVCTACGSVLEDNIIV--SEVQFV--ESSGGGSSAVG--QFVSLDGAGKTPTLG 70
Query: 323 PGRGDASFDSFGVSKYQNRRNISSTDRALINAFREINTMADRINLPKTIVDRANNLFKQV 502
G F V+ + R + L N R I+ + +++ L + +D A N FK
Sbjct: 71 GG--------FHVNLGKESRA-----QTLQNGRRHIHHLGNQLQLNQHCLDTAFNFFKMA 117
Query: 503 HDGKNLKGRANDAIASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLILKAL 673
+GR + +ACLY+ CR EG P ++ + +++ +G+ F L+ + L
Sbjct: 118 VSRHLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYVLGKTFLLLAREL 174
>U28838-1|AAC50170.1| 675|Homo sapiens TFIIIB 90 kDa subunit
protein.
Length = 675
Score = 54.0 bits (124), Expect = 7e-07
Identities = 48/177 (27%), Positives = 80/177 (45%)
Frame = +2
Query: 143 DYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGGDLSTIIG 322
D GD +C+ CG V+ D +I SE + E SG S VG + L G + +G
Sbjct: 17 DAARGDAVCTACGSVLEDNIIV--SEVQFV--ESSGGGSSAVG--QFVSLDGAGKTPTLG 70
Query: 323 PGRGDASFDSFGVSKYQNRRNISSTDRALINAFREINTMADRINLPKTIVDRANNLFKQV 502
G F V+ + R + L + R I+ + +++ L + +D A N FK
Sbjct: 71 GG--------FHVNLGKESRA-----QTLQDGRRHIHHLGNQLQLNQHCLDTAFNFFKMA 117
Query: 503 HDGKNLKGRANDAIASACLYIACRQEGVPRTFKEICAVSKISKKEIGRCFKLILKAL 673
+GR + +ACLY+ CR EG P + + +++ +G+ F L+ + L
Sbjct: 118 VSRHLTRGRKMAHVIAACLYLVCRTEGTPHMLLVLSDLLQVNVYVLGKTFLLLAREL 174
>BC016743-1|AAH16743.1| 208|Homo sapiens BRF1 protein protein.
Length = 208
Score = 50.4 bits (115), Expect = 8e-06
Identities = 45/155 (29%), Positives = 69/155 (44%)
Frame = +2
Query: 143 DYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGGDLSTIIG 322
D GD +C+ CG V+ D +I SE + E SG S VG + L G + +G
Sbjct: 17 DAARGDAVCTACGSVLEDNIIV--SEVQFV--ESSGGGSSAVG--QFVSLDGAGKTPTLG 70
Query: 323 PGRGDASFDSFGVSKYQNRRNISSTDRALINAFREINTMADRINLPKTIVDRANNLFKQV 502
G F V+ + R + L N R I+ + +++ L + +D A N FK
Sbjct: 71 GG--------FHVNLGKESRA-----QTLQNGRRHIHHLGNQLQLNQHCLDTAFNFFKMA 117
Query: 503 HDGKNLKGRANDAIASACLYIACRQEGVPRTFKEI 607
+GR + +ACLY+ CR EG P ++
Sbjct: 118 VSRHLTRGRKMAHVIAACLYLVCRTEGTPHMLLDL 152
>BC086856-1|AAH86856.1| 650|Homo sapiens BRF1 protein protein.
Length = 650
Score = 49.6 bits (113), Expect = 1e-05
Identities = 23/84 (27%), Positives = 44/84 (52%)
Frame = +2
Query: 422 REINTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFK 601
R I+ + +++ L + +D A N FK +GR + +ACLY+ CR EG P
Sbjct: 64 RHIHHLGNQLQLNQHCLDTAFNFFKMAVSRHLTRGRKMAHVIAACLYLVCRTEGTPHMLL 123
Query: 602 EICAVSKISKKEIGRCFKLILKAL 673
++ + +++ +G+ F L+ + L
Sbjct: 124 DLSDLLQVNVYVLGKTFLLLAREL 147
>AJ297408-1|CAC04514.1| 222|Homo sapiens transcription factor II
B-related factor protein.
Length = 222
Score = 49.6 bits (113), Expect = 1e-05
Identities = 44/151 (29%), Positives = 68/151 (45%)
Frame = +2
Query: 155 GDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENPLLSGGDLSTIIGPGRG 334
GD +C+ CG V+ D +I SE + E SG S VG + L G + +G G
Sbjct: 1 GDAVCTACGSVLEDNIIV--SEVQFV--ESSGGGSSAVG--QFVSLDGAGKTPTLGGG-- 52
Query: 335 DASFDSFGVSKYQNRRNISSTDRALINAFREINTMADRINLPKTIVDRANNLFKQVHDGK 514
F V+ + R + L N R I+ + +++ L + +D A N FK
Sbjct: 53 ------FHVNLGKESRA-----QTLQNGRRHIHHLGNQLQLNQHCLDTAFNFFKMAVSRH 101
Query: 515 NLKGRANDAIASACLYIACRQEGVPRTFKEI 607
+GR + +ACLY+ CR EG P ++
Sbjct: 102 LTRGRKMAHVIAACLYLVCRTEGTPHMLLDL 132
>BC010648-1|AAH10648.1| 419|Homo sapiens BRF2, subunit of RNA
polymerase III transcription initiation factor,
BRF1-like protein.
Length = 419
Score = 34.3 bits (75), Expect = 0.59
Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
Frame = +2
Query: 401 RALINAFREINTMADRINLPKTIVDRANNLFKQVHDGKNLKG---RANDAIASACLYIAC 571
R+ R + + + LP T D A ++Q + ++ + + + C+ I C
Sbjct: 67 RSQQRGLRRVRDLCRVLQLPPTFEDTAVAYYQQAYRHSGIRAARLQKKEVLVGCCVLITC 126
Query: 572 RQEGVPRTFKEICAVSKISKKEIGRCFKLILKALETSV 685
RQ P T IC + + I+K L V
Sbjct: 127 RQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDV 164
>AF298153-1|AAG30222.1| 419|Homo sapiens RNA polymerase III
transcription initiation factor BRFU protein.
Length = 419
Score = 34.3 bits (75), Expect = 0.59
Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
Frame = +2
Query: 401 RALINAFREINTMADRINLPKTIVDRANNLFKQVHDGKNLKG---RANDAIASACLYIAC 571
R+ R + + + LP T D A ++Q + ++ + + + C+ I C
Sbjct: 67 RSQQRGLRRVRDLCRVLQLPPTFEDTAVAYYQQAYRHSGIRAARLQKKEVLVGCCVLITC 126
Query: 572 RQEGVPRTFKEICAVSKISKKEIGRCFKLILKALETSV 685
RQ P T IC + + I+K L V
Sbjct: 127 RQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDV 164
>AF206673-1|AAG35669.2| 419|Homo sapiens TFIIIB50 protein.
Length = 419
Score = 34.3 bits (75), Expect = 0.59
Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 3/98 (3%)
Frame = +2
Query: 401 RALINAFREINTMADRINLPKTIVDRANNLFKQVHDGKNLKG---RANDAIASACLYIAC 571
R+ R + + + LP T D A ++Q + ++ + + + C+ I C
Sbjct: 67 RSQQRGLRRVRDLCRVLQLPPTFEDTAVAYYQQAYRHSGIRAARLQKKEVLVGCCVLITC 126
Query: 572 RQEGVPRTFKEICAVSKISKKEIGRCFKLILKALETSV 685
RQ P T IC + + I+K L V
Sbjct: 127 RQHNWPLTMGAICTLLYADLDVFSSTYMQIVKLLGLDV 164
>AK001914-1|BAA91975.1| 419|Homo sapiens protein ( Homo sapiens
cDNA FLJ11052 fis, clone PLACE1004645. ).
Length = 419
Score = 33.5 bits (73), Expect = 1.0
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +2
Query: 401 RALINAFREINTMADRINLPKTIVDRANNLFKQVHDGKNLKG---RANDAIASACLYIAC 571
R+ R + + + LP T D A ++Q + ++ + + + C+ I C
Sbjct: 67 RSQQRGLRRVRDLCRVLQLPPTFEDTAVAYYQQAYRHSGIRAARLQKKEVLVGCCVLITC 126
Query: 572 RQEGVPRTFKEICAV 616
RQ P T IC +
Sbjct: 127 RQHNWPLTMGAICTL 141
>AK223366-1|BAD97086.1| 191|Homo sapiens programmed cell death 6
variant protein.
Length = 191
Score = 31.5 bits (68), Expect = 4.1
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = -3
Query: 214 TDVYDSVSDHQTAFRTYHITRSVILDKGRIRVSIANHFIRLNSR 83
T V+ ++D Q FRTY S ++DK +R +++ RL+ +
Sbjct: 86 TGVWKYITDWQNVFRTYDRDNSGMIDKNELRQALSGFGYRLSDQ 129
>L14812-1|AAA02489.1| 1068|Homo sapiens p107 protein.
Length = 1068
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +2
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEI 607
+ + +NL + A + F + +L+G +A + LY+ACR+ +P K I
Sbjct: 21 LQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACS-LYVACRKSIIPTVGKGI 79
Query: 608 CAVSKISKKEIGRCFKLIL 664
+ +S I R KL L
Sbjct: 80 MEGNCVSLTRILRSAKLSL 98
>BC032247-1|AAH32247.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +2
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEI 607
+ + +NL + A + F + +L+G +A + LY+ACR+ +P K I
Sbjct: 21 LQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACS-LYVACRKSIIPTVGKGI 79
Query: 608 CAVSKISKKEIGRCFKLIL 664
+ +S I R KL L
Sbjct: 80 MEGNCVSLTRILRSAKLSL 98
>BC026272-1|AAH26272.1| 176|Homo sapiens CCNC protein protein.
Length = 176
Score = 31.1 bits (67), Expect = 5.5
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +2
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQE--GVPRTFK 601
I + + + L + ++ A FK+ + +LK +A C+++A + E GV +
Sbjct: 81 IQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTR 140
Query: 602 EICAVSKISKKEIGRCFK-LILK 667
I A + + K + CFK +ILK
Sbjct: 141 LIAAATSVCKCKKYICFKDVILK 163
>AL391114-2|CAI95152.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +2
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEI 607
+ + +NL + A + F + +L+G +A + LY+ACR+ +P K I
Sbjct: 21 LQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACS-LYVACRKSIIPTVGKGI 79
Query: 608 CAVSKISKKEIGRCFKLIL 664
+ +S I R KL L
Sbjct: 80 MEGNCVSLTRILRSAKLSL 98
>AL391114-1|CAI95151.1| 1068|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1068
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +2
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEI 607
+ + +NL + A + F + +L+G +A + LY+ACR+ +P K I
Sbjct: 21 LQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACS-LYVACRKSIIPTVGKGI 79
Query: 608 CAVSKISKKEIGRCFKLIL 664
+ +S I R KL L
Sbjct: 80 MEGNCVSLTRILRSAKLSL 98
>AL365505-2|CAI95178.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +2
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEI 607
+ + +NL + A + F + +L+G +A + LY+ACR+ +P K I
Sbjct: 21 LQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACS-LYVACRKSIIPTVGKGI 79
Query: 608 CAVSKISKKEIGRCFKLIL 664
+ +S I R KL L
Sbjct: 80 MEGNCVSLTRILRSAKLSL 98
>AL365505-1|CAI95177.1| 1068|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1068
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +2
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEI 607
+ + +NL + A + F + +L+G +A + LY+ACR+ +P K I
Sbjct: 21 LQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACS-LYVACRKSIIPTVGKGI 79
Query: 608 CAVSKISKKEIGRCFKLIL 664
+ +S I R KL L
Sbjct: 80 MEGNCVSLTRILRSAKLSL 98
>AL137784-5|CAI19762.1| 143|Homo sapiens cyclin C protein.
Length = 143
Score = 31.1 bits (67), Expect = 5.5
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Frame = +2
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQE--GVPRTFK 601
I + + + L + ++ A FK+ + +LK +A C+++A + E GV +
Sbjct: 48 IQALGEHLKLRQQVIATATVYFKRFYARYSLKSIDPVLMAPTCVFLASKVEEFGVVSNTR 107
Query: 602 EICAVSKISKKEIGRCFK-LILK 667
I A + + K + CFK +ILK
Sbjct: 108 LIAAATSVCKCKKYICFKDVILK 130
>AL136172-4|CAI95717.1| 1014|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1014
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +2
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEI 607
+ + +NL + A + F + +L+G +A + LY+ACR+ +P K I
Sbjct: 21 LQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACS-LYVACRKSIIPTVGKGI 79
Query: 608 CAVSKISKKEIGRCFKLIL 664
+ +S I R KL L
Sbjct: 80 MEGNCVSLTRILRSAKLSL 98
>AL136172-3|CAI95716.1| 1068|Homo sapiens retinoblastoma-like 1
(p107) protein.
Length = 1068
Score = 31.1 bits (67), Expect = 5.5
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +2
Query: 428 INTMADRINLPKTIVDRANNLFKQVHDGKNLKGRANDAIASACLYIACRQEGVPRTFKEI 607
+ + +NL + A + F + +L+G +A + LY+ACR+ +P K I
Sbjct: 21 LQALCQELNLDEGSAAEALDDFTAIRGNYSLEGEVTHWLACS-LYVACRKSIIPTVGKGI 79
Query: 608 CAVSKISKKEIGRCFKLIL 664
+ +S I R KL L
Sbjct: 80 MEGNCVSLTRILRSAKLSL 98
>AB058717-1|BAB47443.1| 1285|Homo sapiens KIAA1814 protein protein.
Length = 1285
Score = 31.1 bits (67), Expect = 5.5
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -1
Query: 324 GPMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSMTLSPTTKPHS 172
GP ++ PP + PPT S P+ +LL+ S P + P T S
Sbjct: 1161 GPPVLHAPPPPNAALPPPPTLLASNPEPALLQSLASLPPNQAFLPPTSAAS 1211
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = -1
Query: 336 SPRPGPMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSMTLSPTTKPHSEHIIS 157
+P P P S P S SGP T + P S+ V + S +S TT + IS
Sbjct: 135 TPSPVPTTSTTSAPTTSTTSGPGTTPSAVPTTSITSVPTTSTNSAPISSTTSATTTSRIS 194
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/68 (32%), Positives = 26/68 (38%)
Frame = -1
Query: 360 TPKLSNDASPRPGPMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSMTLSPTTK 181
+P + SP P P SPP PP R S +V HS P SP TK
Sbjct: 597 SPPIQRRYSPSPPPKRRTASPPP------PPKRRASPSPPPKRRVSHSPPPKQRSSPVTK 650
Query: 180 PHSEHIIS 157
S + S
Sbjct: 651 RRSPSLSS 658
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/68 (32%), Positives = 26/68 (38%)
Frame = -1
Query: 360 TPKLSNDASPRPGPMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSMTLSPTTK 181
+P + SP P P SPP PP R S +V HS P SP TK
Sbjct: 597 SPPIQRRYSPSPPPKRRTASPPP------PPKRRASPSPPPKRRVSHSPPPKQRSSPVTK 650
Query: 180 PHSEHIIS 157
S + S
Sbjct: 651 RRSPSLSS 658
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/68 (32%), Positives = 26/68 (38%)
Frame = -1
Query: 360 TPKLSNDASPRPGPMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSMTLSPTTK 181
+P + SP P P SPP PP R S +V HS P SP TK
Sbjct: 606 SPPIQRRYSPSPPPKRRTASPPP------PPKRRASPSPPPKRRVSHSPPPKQRSSPVTK 659
Query: 180 PHSEHIIS 157
S + S
Sbjct: 660 RRSPSLSS 667
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/68 (32%), Positives = 26/68 (38%)
Frame = -1
Query: 360 TPKLSNDASPRPGPMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSMTLSPTTK 181
+P + SP P P SPP PP R S +V HS P SP TK
Sbjct: 597 SPPIQRRYSPSPPPKRRTASPPP------PPKRRASPSPPPKRRVSHSPPPKQRSSPVTK 650
Query: 180 PHSEHIIS 157
S + S
Sbjct: 651 RRSPSLSS 658
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/68 (32%), Positives = 26/68 (38%)
Frame = -1
Query: 360 TPKLSNDASPRPGPMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSMTLSPTTK 181
+P + SP P P SPP PP R S +V HS P SP TK
Sbjct: 606 SPPIQRRYSPSPPPKRRTASPPP------PPKRRASPSPPPKRRVSHSPPPKQRSSPVTK 659
Query: 180 PHSEHIIS 157
S + S
Sbjct: 660 RRSPSLSS 667
>AJ298319-1|CAC83676.1| 372|Homo sapiens mucin 5 protein.
Length = 372
Score = 30.7 bits (66), Expect = 7.2
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = -1
Query: 336 SPRPGPMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSMTLSPTTKPHSEHIIS 157
+P P P S P S SGP T P S V + + +++S TT HS+ + S
Sbjct: 147 TPSPVPTTSTTSAPTTSTTSGPGTTPSPVPTTSTTPVSKTSTSHLSVSKTT--HSQPVTS 204
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/68 (32%), Positives = 26/68 (38%)
Frame = -1
Query: 360 TPKLSNDASPRPGPMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSMTLSPTTK 181
+P + SP P P SPP PP R S +V HS P SP TK
Sbjct: 595 SPPIQRRYSPSPPPKRRTASPPP------PPKRRASPSPPPKRRVSHSPPPKQRSSPVTK 648
Query: 180 PHSEHIIS 157
S + S
Sbjct: 649 RRSPSLSS 656
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.7 bits (66), Expect = 7.2
Identities = 22/68 (32%), Positives = 26/68 (38%)
Frame = -1
Query: 360 TPKLSNDASPRPGPMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSMTLSPTTK 181
+P + SP P P SPP PP R S +V HS P SP TK
Sbjct: 595 SPPIQRRYSPSPPPKRRTASPPP------PPKRRASPSPPPKRRVSHSPPPKQRSSPVTK 648
Query: 180 PHSEHIIS 157
S + S
Sbjct: 649 RRSPSLSS 656
>U58773-1|AAF14336.1| 191|Homo sapiens calcium binding protein
protein.
Length = 191
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 214 TDVYDSVSDHQTAFRTYHITRSVILDKGRIRVSIANHFIRLNSR 83
T V+ ++D Q FRTY S ++DK ++ +++ RL+ +
Sbjct: 86 TGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQ 129
>BX664726-3|CAI17100.1| 1347|Homo sapiens family with sequence
similarity 75, member A2 protein.
Length = 1347
Score = 30.3 bits (65), Expect = 9.6
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = -1
Query: 363 ETPKLSNDASPRPGPMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSM---TLS 193
E P L P P+ SPP GF+ PP RD +L+ H + ++ T+
Sbjct: 199 EPPALFPHPPHTPDPLAC--SPPPPKGFTAPPLRDS-----TLITPSHCDSVALPLGTVP 251
Query: 192 PTTKPHSEHIISPAL*SSIRGAS 124
+ PH + + S S + G++
Sbjct: 252 QSLSPHEDLVASVPAISGLGGSN 274
>BX005214-2|CAH72787.1| 1347|Homo sapiens family with sequence
similarity 75, member A1 protein.
Length = 1347
Score = 30.3 bits (65), Expect = 9.6
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = -1
Query: 363 ETPKLSNDASPRPGPMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSM---TLS 193
E P L P P+ SPP GF+ PP RD +L+ H + ++ T+
Sbjct: 199 EPPALFPHPPHTPDPLAC--SPPPPKGFTAPPLRDS-----TLITPSHCDSVALPLGTVP 251
Query: 192 PTTKPHSEHIISPAL*SSIRGAS 124
+ PH + + S S + G++
Sbjct: 252 QSLSPHEDLVASVPAISGLGGSN 274
>BT020072-1|AAV38875.1| 191|Homo sapiens programmed cell death 6
protein.
Length = 191
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 214 TDVYDSVSDHQTAFRTYHITRSVILDKGRIRVSIANHFIRLNSR 83
T V+ ++D Q FRTY S ++DK ++ +++ RL+ +
Sbjct: 86 TGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQ 129
>BC106706-1|AAI06707.1| 191|Homo sapiens programmed cell death 6
protein.
Length = 191
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 214 TDVYDSVSDHQTAFRTYHITRSVILDKGRIRVSIANHFIRLNSR 83
T V+ ++D Q FRTY S ++DK ++ +++ RL+ +
Sbjct: 86 TGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQ 129
>BC066643-1|AAH66643.1| 1202|Homo sapiens CASK interacting protein 2
protein.
Length = 1202
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 354 KLSNDASPRPGPMIVDKSPPDKSGFSGPPTRDGSTP 247
+LS+ + P P P +D SP K G +GP R S P
Sbjct: 875 RLSSVSGPSPEPPPLDGSPGPKEGATGPRRRTLSEP 910
>BC012384-1|AAH12384.1| 191|Homo sapiens programmed cell death 6
protein.
Length = 191
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 214 TDVYDSVSDHQTAFRTYHITRSVILDKGRIRVSIANHFIRLNSR 83
T V+ ++D Q FRTY S ++DK ++ +++ RL+ +
Sbjct: 86 TGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQ 129
>AY633626-1|AAT46480.1| 372|Homo sapiens mitogen-activated protein
kinase 2-associated protein 1r protein.
Length = 372
Score = 30.3 bits (65), Expect = 9.6
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = +2
Query: 362 SKYQNRRNISSTDRALINAFREINTMADRINLPKTIVDRAN-------NLFKQVHDGKNL 520
SK+ + ++ +T IN + +++ DR+ LP T+V A+ L + +
Sbjct: 161 SKFDGKGHVGTTATKKINVYLPLHSSQDRL-LPMTVVTMASARVQDLIGLICWQYTSEGR 219
Query: 521 KGRANDAIASACLYIA 568
+ + ND +++ CL+IA
Sbjct: 220 EPKLNDNVSAYCLHIA 235
>AY633625-1|AAT46479.1| 522|Homo sapiens mitogen-activated protein
kinase 2-associated protein 1b protein.
Length = 522
Score = 30.3 bits (65), Expect = 9.6
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = +2
Query: 362 SKYQNRRNISSTDRALINAFREINTMADRINLPKTIVDRAN-------NLFKQVHDGKNL 520
SK+ + ++ +T IN + +++ DR+ LP T+V A+ L + +
Sbjct: 161 SKFDGKGHVGTTATKKINVYLPLHSSQDRL-LPMTVVTMASARVQDLIGLICWQYTSEGR 219
Query: 521 KGRANDAIASACLYIA 568
+ + ND +++ CL+IA
Sbjct: 220 EPKLNDNVSAYCLHIA 235
>AY633624-1|AAT46478.1| 486|Homo sapiens mitogen-activated protein
kinase 2-associated protein 1a protein.
Length = 486
Score = 30.3 bits (65), Expect = 9.6
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Frame = +2
Query: 362 SKYQNRRNISSTDRALINAFREINTMADRINLPKTIVDRAN-------NLFKQVHDGKNL 520
SK+ + ++ +T IN + +++ DR+ LP T+V A+ L + +
Sbjct: 161 SKFDGKGHVGTTATKKINVYLPLHSSQDRL-LPMTVVTMASARVQDLIGLICWQYTSEGR 219
Query: 521 KGRANDAIASACLYIA 568
+ + ND +++ CL+IA
Sbjct: 220 EPKLNDNVSAYCLHIA 235
>AL445584-1|CAH73043.1| 1343|Homo sapiens family with sequence
similarity 75, member A6 protein.
Length = 1343
Score = 30.3 bits (65), Expect = 9.6
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = -1
Query: 363 ETPKLSNDASPRPGPMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSM---TLS 193
E P L P P+ SPP GF+ PP RD +L+ H + ++ T+
Sbjct: 199 EPPALFPHPPHTPDPLAC--SPPPPKGFTAPPLRDS-----TLITPSHCDSVALPLGTVP 251
Query: 192 PTTKPHSEHIISPAL*SSIRGAS 124
+ PH + + S S + G++
Sbjct: 252 QSLSPHEDLVASVPAISGLGGSN 274
>AF451976-1|AAL49757.1| 1202|Homo sapiens cask-interacting protein 2
protein.
Length = 1202
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 354 KLSNDASPRPGPMIVDKSPPDKSGFSGPPTRDGSTP 247
+LS+ + P P P +D SP K G +GP R S P
Sbjct: 875 RLSSVSGPSPEPPPLDGSPGPKEGATGPRRRTLSEP 910
>AF253515-1|AAN70985.1| 1957|Homo sapiens BAF250b subunit protein.
Length = 1957
Score = 30.3 bits (65), Expect = 9.6
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = -1
Query: 369 YLETPKLSNDASPRPGPMIVDKSPPDKSGFSGPPTRDGSTPDFSLLKVRHSEPTSMTLSP 190
Y P LSN S P P +S ++ P++ P + KV + PTS P
Sbjct: 1248 YQTPPSLSNHISRAPSPASFQRSLENRMS----PSKSPFLPSMKMQKVMPTVPTSQVTGP 1303
Query: 189 TTKP 178
+P
Sbjct: 1304 PPQP 1307
>AF035606-1|AAC27697.1| 191|Homo sapiens calcium binding protein
protein.
Length = 191
Score = 30.3 bits (65), Expect = 9.6
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = -3
Query: 214 TDVYDSVSDHQTAFRTYHITRSVILDKGRIRVSIANHFIRLNSR 83
T V+ ++D Q FRTY S ++DK ++ +++ RL+ +
Sbjct: 86 TGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQ 129
>AB065629-1|BAC05855.1| 276|Homo sapiens seven transmembrane helix
receptor protein.
Length = 276
Score = 30.3 bits (65), Expect = 9.6
Identities = 17/58 (29%), Positives = 24/58 (41%)
Frame = -3
Query: 670 CFQNQFETPSYFFFTYLADGTDLFKCTWHTFLTTSNVEAS*SYSIIGTTLQVFTVVNL 497
C TP YFF + LA ++ + +S V + S+ G T Q F V L
Sbjct: 50 CIDRHLHTPMYFFLSMLASSKTVYTLFIIPQMLSSFVTQTQPISLAGCTTQTFFFVTL 107
>AB032965-1|BAA86453.1| 1124|Homo sapiens KIAA1139 protein protein.
Length = 1124
Score = 30.3 bits (65), Expect = 9.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1
Query: 354 KLSNDASPRPGPMIVDKSPPDKSGFSGPPTRDGSTP 247
+LS+ + P P P +D SP K G +GP R S P
Sbjct: 797 RLSSVSGPSPEPPPLDGSPGPKEGATGPRRRTLSEP 832
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,625,012
Number of Sequences: 237096
Number of extensions: 2811987
Number of successful extensions: 7780
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 6790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7751
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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