Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_A24
         (950 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-4|CAB60604.1|  458|Caenorhabditis elegans Hypothetical ...   121   9e-28
Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical pr...    55   9e-08
Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical pr...    55   9e-08
Z71258-4|CAA95783.2|  423|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U88314-9|AAF99881.1|  408|Caenorhabditis elegans Hypothetical pr...    29   3.7  
Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical pr...    29   6.5  

>AL132865-4|CAB60604.1|  458|Caenorhabditis elegans Hypothetical
           protein Y62E10A.6 protein.
          Length = 458

 Score =  121 bits (291), Expect = 9e-28
 Identities = 59/121 (48%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
 Frame = +1

Query: 355 PRVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTK 534
           PR+ IVG+GPAG +A   L +     +D+ E  PVPFGL+RYGVAPDH EVKNVIN F  
Sbjct: 26  PRLAIVGSGPAGMFACNGLLRKSNFSVDVFENSPVPFGLVRYGVAPDHQEVKNVINTFDA 85

Query: 535 VAQ--RPEVNFXGNVTLGKDITLHQLRQHYDAVLXTYGAEKDKTLGIENENAQNVIXARH 708
           + +  R  +    NV +G+DIT  +L + YDAVL  YG+ K +TL I   +A NVI    
Sbjct: 86  MFEKNRERLKLFCNVNIGRDITFDELTRGYDAVLLAYGSYKTRTLDIPGSDASNVISGSE 145

Query: 709 F 711
           F
Sbjct: 146 F 146


>Z49889-5|CAA90070.1| 2207|Caenorhabditis elegans Hypothetical protein
            W07E11.1 protein.
          Length = 2207

 Score = 54.8 bits (126), Expect = 9e-08
 Identities = 33/118 (27%), Positives = 60/118 (50%)
 Frame = +1

Query: 358  RVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTKV 537
            R+ I+G+GP+G  AA  L K +   + + E+     GL+RYG+ P     K V+++   +
Sbjct: 1848 RIAIIGSGPSGLGAAAQLVK-VGHTVVVYERKNRVGGLLRYGI-PTMKLDKFVVDRRVSL 1905

Query: 538  AQRPEVNFXGNVTLGKDITLHQLRQHYDAVLXTYGAEKDKTLGIENENAQNVIXARHF 711
             ++  V F  N  +GK +    L +  DA++   G+   + L +E  +A+ V  A  +
Sbjct: 1906 LEQEGVRFLTNTEIGKHVPADFLLKENDAIIVCTGSTTARDLNVEGRDAKGVCFAMEY 1963


>Z49868-5|CAA90032.1| 2207|Caenorhabditis elegans Hypothetical protein
            W07E11.1 protein.
          Length = 2207

 Score = 54.8 bits (126), Expect = 9e-08
 Identities = 33/118 (27%), Positives = 60/118 (50%)
 Frame = +1

Query: 358  RVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPVPFGLIRYGVAPDHPEVKNVINQFTKV 537
            R+ I+G+GP+G  AA  L K +   + + E+     GL+RYG+ P     K V+++   +
Sbjct: 1848 RIAIIGSGPSGLGAAAQLVK-VGHTVVVYERKNRVGGLLRYGI-PTMKLDKFVVDRRVSL 1905

Query: 538  AQRPEVNFXGNVTLGKDITLHQLRQHYDAVLXTYGAEKDKTLGIENENAQNVIXARHF 711
             ++  V F  N  +GK +    L +  DA++   G+   + L +E  +A+ V  A  +
Sbjct: 1906 LEQEGVRFLTNTEIGKHVPADFLLKENDAIIVCTGSTTARDLNVEGRDAKGVCFAMEY 1963


>Z71258-4|CAA95783.2|  423|Caenorhabditis elegans Hypothetical
           protein C01H6.4 protein.
          Length = 423

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 358 RVCIVGAGPAGFYAAMHLTKNIQCKIDLIEK 450
           ++CI+GAG AG  +A H  K    ++D+ E+
Sbjct: 4   KICIIGAGAAGLVSAKHAIKQ-GYQVDIFEQ 33


>U88314-9|AAF99881.1|  408|Caenorhabditis elegans Hypothetical
           protein C46H11.2 protein.
          Length = 408

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
 Frame = +1

Query: 358 RVCIVGAGPAGFYAAMH-LTKNIQCKI 435
           RVC++GAG AG  AA H L + ++ ++
Sbjct: 4   RVCVIGAGAAGLAAAKHSLAQGLEVEV 30


>Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical
           protein C34C6.4 protein.
          Length = 599

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +1

Query: 328 YSANNYTKIPRVCIVGAGPAGFYAAMHLTKNIQCKIDLIEKLPV 459
           +SA+     P   IVGAG AG   A  LT++   ++ LIE  PV
Sbjct: 29  FSADIAENKPTHIIVGAGSAGCVLANRLTEDPSNRVLLIEAGPV 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,065,190
Number of Sequences: 27780
Number of extensions: 345035
Number of successful extensions: 601
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)