Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_A23
(893 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0756 + 6869100-6869327,6869943-6870123,6870233-6870399,687... 65 6e-11
12_01_0764 + 6934570-6934726,6935150-6935316,6935408-6935490,693... 64 1e-10
12_01_0762 + 6915299-6915532,6916043-6916220,6916490-6916656,691... 64 2e-10
01_06_1628 + 38745964-38746480,38747116-38747282,38747325-387474... 62 4e-10
12_01_0760 + 6910325-6910558,6911305-6911455,6911949-6912115,691... 62 6e-10
04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787 62 6e-10
11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259 60 3e-09
12_01_0759 + 6894556-6894628,6894653-6894738,6895039-6895121,689... 55 7e-08
06_03_0679 - 23464009-23464381,23464804-23464886,23466537-234667... 55 9e-08
09_04_0404 + 17322664-17322718,17323676-17323849,17324695-173248... 36 0.043
06_01_0691 - 5040280-5040801,5041439-5041529,5042368-5042568,504... 31 1.6
01_06_1630 + 38753016-38753209,38753904-38754039,38754291-387544... 29 5.0
>12_01_0756 +
6869100-6869327,6869943-6870123,6870233-6870399,
6870523-6870605,6870716-6871094
Length = 345
Score = 65.3 bits (152), Expect = 6e-11
Identities = 35/89 (39%), Positives = 48/89 (53%)
Frame = +2
Query: 470 TQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXX 649
T N PK ++K+ + S G +G+ G TAY GF E+ KPK
Sbjct: 110 TLVNNPKPYLHKI-NYPEFPLSYYTGVLGIAGLTAYGGFFEVSKPKKGDYVFVSAASGAV 168
Query: 650 XSLVGQIAKIKGCRVIGFAGTDDKVKWLE 736
+VGQ+AKI GC V+G AG+D+KVK L+
Sbjct: 169 GQIVGQLAKITGCYVVGSAGSDEKVKLLK 197
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +3
Query: 735 REELGFDKAFNYKT-VDVPAALKEAAPNGIDCYFDNVGGEISSQIL 869
+ + GF AFNYK +D+ ALK P+GID YFDNVGG + +L
Sbjct: 197 KTKFGFHDAFNYKKELDLEGALKRCFPDGIDIYFDNVGGAMLDAVL 242
>12_01_0764 +
6934570-6934726,6935150-6935316,6935408-6935490,
6935588-6935966
Length = 261
Score = 64.5 bits (150), Expect = 1e-10
Identities = 30/64 (46%), Positives = 38/64 (59%)
Frame = +2
Query: 545 GAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDKV 724
G +GMPG TAY GF E+ KPK +VGQ+AKI GC V+G AG+D+KV
Sbjct: 50 GILGMPGLTAYGGFFEVAKPKKGEYVFISSAFGAVGQIVGQLAKITGCYVVGSAGSDEKV 109
Query: 725 KWLE 736
L+
Sbjct: 110 NLLK 113
Score = 53.2 bits (122), Expect = 3e-07
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +3
Query: 720 K*NGWREELGFDKAFNYKT-VDVPAALKEAAPNGIDCYFDNVGGEISSQIL 869
K N + + GFD AFNYK +D+ AALK P+GID YF+NVGG + +L
Sbjct: 108 KVNLLKTKFGFDDAFNYKKELDLEAALKRCFPDGIDIYFENVGGAMLDAVL 158
>12_01_0762 +
6915299-6915532,6916043-6916220,6916490-6916656,
6916770-6916852,6916940-6917318
Length = 346
Score = 63.7 bits (148), Expect = 2e-10
Identities = 30/64 (46%), Positives = 38/64 (59%)
Frame = +2
Query: 545 GAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDKV 724
G +GMPG TAY GF E+ KPK +VGQ+AKI GC V+G AG+D+KV
Sbjct: 135 GILGMPGLTAYAGFFEVSKPKKGEYVFISAASGAVGQIVGQLAKIIGCYVVGSAGSDEKV 194
Query: 725 KWLE 736
L+
Sbjct: 195 SLLK 198
Score = 48.8 bits (111), Expect = 6e-06
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +3
Query: 735 REELGFDKAFNYKTV-DVPAALKEAAPNGIDCYFDNVGGEISSQIL 869
+ + GF+ AFNYK D+ AAL+ P GID YF+NVGGE +L
Sbjct: 198 KTKFGFNDAFNYKKEPDLEAALRRYFPEGIDIYFENVGGETLDAVL 243
>01_06_1628 +
38745964-38746480,38747116-38747282,38747325-38747440,
38747718-38748114
Length = 398
Score = 62.5 bits (145), Expect = 4e-10
Identities = 29/64 (45%), Positives = 37/64 (57%)
Frame = +2
Query: 533 SLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGT 712
S +G +GMPG TAY GF EIC PK +VGQ+AK+ GC V+G AGT
Sbjct: 166 SYHLGLLGMPGFTAYAGFYEICSPKKGEFVFVSAASGAVGQIVGQLAKLHGCYVVGSAGT 225
Query: 713 DDKV 724
+ K+
Sbjct: 226 NQKM 229
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/44 (54%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +3
Query: 741 ELGFDKAFNYKTV-DVPAALKEAAPNGIDCYFDNVGGEISSQIL 869
+ GFD AFNYK D+ AALK P GID YF+NVGG + +L
Sbjct: 246 KFGFDAAFNYKEEPDLTAALKRYFPEGIDIYFENVGGPMLDAVL 289
>12_01_0760 +
6910325-6910558,6911305-6911455,6911949-6912115,
6912227-6912309,6912395-6912773
Length = 337
Score = 62.1 bits (144), Expect = 6e-10
Identities = 30/66 (45%), Positives = 38/66 (57%)
Frame = +2
Query: 545 GAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDKV 724
G +GMPG TAY GF ++ KPK +VGQ+AKI GC VIG AG D+KV
Sbjct: 126 GILGMPGLTAYAGFFDVPKPKKGEYVFISGASGAVGQVVGQLAKITGCYVIGSAGYDEKV 185
Query: 725 KWLEGR 742
L+ +
Sbjct: 186 NLLKSK 191
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +3
Query: 720 K*NGWREELGFDKAFNYKTV-DVPAALKEAAPNGIDCYFDNVGGEISSQIL 869
K N + + GFD AFNYK D+ AAL+ P GID Y++NVGG++ +L
Sbjct: 184 KVNLLKSKFGFDDAFNYKKEQDLEAALRRYFPEGIDIYYENVGGKMLDAVL 234
>04_04_0380 - 24833533-24834161,24834247-24834427,24834560-24834787
Length = 345
Score = 62.1 bits (144), Expect = 6e-10
Identities = 30/63 (47%), Positives = 36/63 (57%)
Frame = +2
Query: 545 GAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDKV 724
G +GM G TAY GF EIC P+ LVGQ AK+ GC V+G AG+DDKV
Sbjct: 134 GLLGMAGFTAYVGFHEICAPREGERVYVSAASGAVGQLVGQFAKLMGCYVVGSAGSDDKV 193
Query: 725 KWL 733
+ L
Sbjct: 194 RLL 196
Score = 54.8 bits (126), Expect = 9e-08
Identities = 26/46 (56%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = +3
Query: 735 REELGFDKAFNYKTV-DVPAALKEAAPNGIDCYFDNVGGEISSQIL 869
RE+ GFD AFNYK D+ AALK P GID YF+NVGG + +L
Sbjct: 197 REKFGFDDAFNYKKESDLSAALKRCFPEGIDIYFENVGGAMLDAVL 242
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 180 RKYVVKNHFKGVPKREDYELV 242
+K V++NH G PK D ELV
Sbjct: 6 KKIVLRNHVTGFPKESDMELV 26
>11_02_0101 - 8306468-8307099,8307227-8307404,8307990-8308259
Length = 359
Score = 59.7 bits (138), Expect = 3e-09
Identities = 35/91 (38%), Positives = 49/91 (53%)
Frame = +2
Query: 464 LVTQPNTPKDRIYKLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXX 643
L+TQP T ++K+ + L S G +G+ G TAY F E+ KPK
Sbjct: 125 LITQPET----LHKI-NHPDLPLSYYTGVLGVTGLTAYAAFFEVGKPKKGETVFVSAASG 179
Query: 644 XXXSLVGQIAKIKGCRVIGFAGTDDKVKWLE 736
+VGQ+AKI GC V+G AG+D+KV L+
Sbjct: 180 AVGQIVGQLAKIAGCYVVGSAGSDEKVTLLK 210
Score = 45.6 bits (103), Expect = 5e-05
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Frame = +3
Query: 735 REELGFDKAFNYK--TVDVPAALKEAAPNGIDCYFDNVGG 848
+ + GF AFNYK + D+ AL+ P+GID YFDNVGG
Sbjct: 210 KTKFGFHDAFNYKKESNDLTGALRRCFPDGIDIYFDNVGG 249
>12_01_0759 +
6894556-6894628,6894653-6894738,6895039-6895121,
6895278-6895650
Length = 204
Score = 55.2 bits (127), Expect = 7e-08
Identities = 30/61 (49%), Positives = 36/61 (59%)
Frame = +2
Query: 554 GMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIKGCRVIGFAGTDDKVKWL 733
GM G TAY GF E+ KPK +VGQ+AKIKGC V+G AG+DDKV L
Sbjct: 6 GMHGLTAYVGFFEMSKPKKACGAIG--------QIVGQLAKIKGCYVVGSAGSDDKVNLL 57
Query: 734 E 736
+
Sbjct: 58 K 58
Score = 48.4 bits (110), Expect = 8e-06
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +3
Query: 720 K*NGWREELGFDKAFNYKT-VDVPAALKEAAPNGIDCYFDNVGGEISSQIL 869
K N + + GFD AFNYK D+ AALK P GID F+NVGG + +L
Sbjct: 53 KVNLLKTKFGFDDAFNYKKETDLEAALKRCFPEGIDIDFENVGGAMLDAVL 103
>06_03_0679 -
23464009-23464381,23464804-23464886,23466537-23466703,
23466821-23467007,23467093-23467311
Length = 342
Score = 54.8 bits (126), Expect = 9e-08
Identities = 27/47 (57%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Frame = +3
Query: 735 REELGFDKAFNYKTV-DVPAALKEAAPNGIDCYFDNVGGEISSQILA 872
+ +LGFD AFNYK D+ +ALK P+GID YFDNVGGE LA
Sbjct: 196 KNKLGFDDAFNYKDEPDMKSALKRYFPDGIDIYFDNVGGETLEAALA 242
Score = 52.4 bits (120), Expect = 5e-07
Identities = 30/80 (37%), Positives = 40/80 (50%)
Frame = +2
Query: 503 KLPDLQGLSPSLGVGAVGMPGATAYFGFLEICKPKXXXXXXXXXXXXXXXSLVGQIAKIK 682
KL L S + A+G G TAY G E+ +P+ SLVGQ AK+
Sbjct: 119 KLAASDDLPLSHHLSALGTSGMTAYAGLYEVGRPEAGEKVFVSAASGSVGSLVGQFAKLA 178
Query: 683 GCRVIGFAGTDDKVKWLEGR 742
GC V+G AGT+ KV L+ +
Sbjct: 179 GCYVVGCAGTNAKVDLLKNK 198
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Frame = +1
Query: 295 WISVDPYL-----RAYNSYQAV----PYDQF-SYQVGVVVESRDSNYPVGTRVVAHKGWC 444
++SVDPY R S+ AV P ++ +Y G VV S Y G V GW
Sbjct: 45 YLSVDPYQLNRMKRRSASHLAVDGIVPGERIDAYGAGEVVASACEEYKEGDVVAGVLGWE 104
Query: 445 DHYVFTPS 468
D+ +F PS
Sbjct: 105 DYTLFRPS 112
>09_04_0404 +
17322664-17322718,17323676-17323849,17324695-17324876,
17325312-17325417,17325708-17325784,17326485-17326572,
17327320-17327509,17328353-17328479,17328584-17328664,
17328815-17328916,17329042-17329137,17329279-17329353,
17329746-17329865,17330319-17330447,17330762-17330839,
17331330-17331416,17333538-17333651,17334294-17334362,
17334741-17334785
Length = 664
Score = 35.9 bits (79), Expect = 0.043
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 744 LGFDKAFNYKTVDVPAALKEAAPNGIDCYFDNVGGEI 854
LG D+ NY+ + LK+ P G D +++VGGE+
Sbjct: 476 LGVDRVINYQNEKIKDVLKKEFPRGADIIYESVGGEM 512
>06_01_0691 -
5040280-5040801,5041439-5041529,5042368-5042568,
5042649-5046148
Length = 1437
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1
Query: 812 RGSFLECCRYIYRFIIKRLVEAELFPPAISLY 717
RGSF + C +Y ++I L EAELFP A ++
Sbjct: 669 RGSFGQDCD-LYEYLITYLEEAELFPEACQVF 699
>01_06_1630 +
38753016-38753209,38753904-38754039,38754291-38754404,
38755053-38755112,38755223-38755252,38755523-38756206
Length = 405
Score = 29.1 bits (62), Expect = 5.0
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 810 PNGIDCYFDNVGGEISSQIL 869
P GID YF+NVGG + +L
Sbjct: 68 PEGIDIYFENVGGPMLDVVL 87
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,047,447
Number of Sequences: 37544
Number of extensions: 441430
Number of successful extensions: 1251
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1243
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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