Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_A19
(854 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 37 0.11
AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII colla... 36 0.19
X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing f... 35 0.33
BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor proline... 35 0.33
BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein. 35 0.33
AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor proline... 35 0.33
BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein. 35 0.43
BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein. 35 0.43
U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator... 34 0.57
D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator... 34 0.57
BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix... 34 0.57
AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein. 34 0.57
AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein. 34 0.57
AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related matrix-... 34 0.57
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 34 0.76
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 34 0.76
AF093747-1|AAD29861.1| 115|Homo sapiens KH type splicing regula... 34 0.76
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 33 1.0
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 33 1.0
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 33 1.0
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 33 1.0
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 33 1.0
AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha... 33 1.0
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 33 1.0
J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein. 32 2.3
BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein. 32 2.3
BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein. 32 2.3
AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha ... 32 2.3
AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-... 32 2.3
AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-... 32 2.3
AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-... 32 2.3
AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collage... 32 2.3
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 31 4.0
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 31 4.0
M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen ... 31 4.0
M11315-1|AAA52042.1| 411|Homo sapiens COL4A1 protein. 31 4.0
M10940-1|AAA52006.1| 414|Homo sapiens COL4A1 protein. 31 4.0
BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein. 31 4.0
BC110393-1|AAI10394.1| 439|Homo sapiens EMI domain containing 2... 31 4.0
BC109254-1|AAI09255.1| 439|Homo sapiens EMI domain containing 2... 31 4.0
BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein. 31 4.0
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 31 4.0
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 31 4.0
AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha ... 31 4.0
AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha ... 31 4.0
AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha ... 31 4.0
AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha ... 31 4.0
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 31 4.0
AJ416091-1|CAC94778.1| 441|Homo sapiens putative emu2 protein p... 31 4.0
AB209646-1|BAD92883.1| 847|Homo sapiens COL4A1 protein variant ... 31 4.0
U73778-1|AAC51244.1| 3063|Homo sapiens collagen type XII alpha-1... 31 5.3
M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collag... 31 5.3
D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain... 31 5.3
BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, al... 31 5.3
BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, al... 31 5.3
BC042075-1|AAH42075.1| 854|Homo sapiens COL22A1 protein protein. 31 5.3
BC008798-1|AAH08798.1| 258|Homo sapiens complement component 1,... 31 5.3
BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein. 31 5.3
AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV colla... 31 5.3
AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1... 31 5.3
AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1... 31 5.3
AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1... 31 5.3
AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, al... 31 5.3
AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, al... 31 5.3
AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, al... 31 5.3
AL354664-1|CAH71310.1| 3063|Homo sapiens collagen type XII alpha... 31 5.3
AL096771-3|CAI19908.1| 3063|Homo sapiens collagen type XII alpha... 31 5.3
AL080250-2|CAI19898.1| 3063|Homo sapiens collagen type XII alpha... 31 5.3
AF410771-1|AAK95248.1| 258|Homo sapiens C1q-related factor prot... 31 5.3
AF095154-1|AAC64186.1| 258|Homo sapiens C1q-related factor prot... 31 5.3
AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V coll... 31 5.3
M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collage... 31 7.1
M33653-1|AAA52047.1| 245|Homo sapiens alpha-2 type IV collagen ... 31 7.1
M20803-4|AAA51990.1| 152|Homo sapiens COL13A1 protein. 31 7.1
M20803-2|AAA51988.1| 153|Homo sapiens COL13A1 protein. 31 7.1
M20803-1|AAA51987.1| 167|Homo sapiens COL13A1 protein. 31 7.1
AL138925-2|CAI15451.2| 695|Homo sapiens collagen type XIII alph... 31 7.1
AL138925-1|CAI15450.1| 717|Homo sapiens collagen type XIII alph... 31 7.1
AJ293624-1|CAC00688.1| 717|Homo sapiens type XIII collagen prot... 31 7.1
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 30 9.3
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 30 9.3
X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen pr... 30 9.3
X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3 col... 30 9.3
M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein. 30 9.3
M20789-1|AAB59373.1| 589|Homo sapiens alpha-1 type I collagen p... 30 9.3
L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein. 30 9.3
L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen... 30 9.3
K03179-1|AAA51847.1| 136|Homo sapiens COL1A1 protein. 30 9.3
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 30 9.3
BC099645-1|AAH99645.1| 657|Homo sapiens COL8A2 protein protein. 30 9.3
BC096297-1|AAH96297.1| 657|Homo sapiens COL8A2 protein protein. 30 9.3
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 30 9.3
BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein. 30 9.3
BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein. 30 9.3
AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen... 30 9.3
AL138787-1|CAI22267.1| 703|Homo sapiens collagen type VIII alph... 30 9.3
AK074129-1|BAB84955.1| 705|Homo sapiens FLJ00201 protein protein. 30 9.3
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 30 9.3
AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein. 30 9.3
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 30 9.3
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein. 30 9.3
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 36.7 bits (81), Expect = 0.11
Identities = 28/96 (29%), Positives = 32/96 (33%)
Frame = +2
Query: 473 AXGXGGGVXGXXPGPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXRXPP 652
A G G G+ P PP PP G+ G A P P P PP
Sbjct: 35 APGPGAGLLAPGPPPP----PPVGSMGALTAAFPFAALPPPPPPPPPPPPQQPP----PP 86
Query: 653 XTXPXXQAXXPXWKXPTPLXTPQKXSPPXXEXPXXP 760
P A P + P P Q+ SPP P P
Sbjct: 87 PPPPSPGASYPPPQPPPPPPLYQRVSPPQPPPPQPP 122
>AF406780-1|AAN03620.1| 1626|Homo sapiens alpha 1 type XXII collagen
protein.
Length = 1626
Score = 35.9 bits (79), Expect = 0.19
Identities = 25/88 (28%), Positives = 27/88 (30%), Gaps = 2/88 (2%)
Frame = +2
Query: 509 PGPPXGXXP--PXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQAXX 682
PGPP P P G GP G + G K D P P P P
Sbjct: 671 PGPPGARGPIGPEGRDGPPGLQGLRGKKGDMGPPGIPGLLGLQGPPGPPGVPGPPGPGGS 730
Query: 683 PXWKXPTPLXTPQKXSPPXXEXPXXPXG 766
P P + P K PP P G
Sbjct: 731 PG--LPGEIGFPGKPGPPGPTGPPGKDG 756
Score = 31.1 bits (67), Expect = 5.3
Identities = 25/81 (30%), Positives = 28/81 (34%)
Frame = +2
Query: 509 PGPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQAXXPX 688
PGPP G P G+ G GA G K D P P PP A P
Sbjct: 1158 PGPP-GIAGPQGSQGERGADGEVGQKGDQGHPGVP-GFMGPPGNPGPPGADGIAGAAGP- 1214
Query: 689 WKXPTPLXTPQKXSPPXXEXP 751
P +P K PP + P
Sbjct: 1215 ---PGIQGSPGKEGPPGPQGP 1232
>X70944-1|CAA50283.1| 707|Homo sapiens PTB-associated splicing
factor protein.
Length = 707
Score = 35.1 bits (77), Expect = 0.33
Identities = 28/99 (28%), Positives = 31/99 (31%), Gaps = 2/99 (2%)
Frame = +2
Query: 470 HAXGXGGGVXGXXP--GPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXR 643
H G GGG G PP G GP G P P P P Q +
Sbjct: 17 HRRGGGGGRGGLHDFRSPPPGMGLNQNR-GPMGPGPGQSGPKPPIPPPPPH-----QQQQ 70
Query: 644 XPPXTXPXXQAXXPXWKXPTPLXTPQKXSPPXXEXPXXP 760
PP P Q P P P Q+ PP + P
Sbjct: 71 QPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKP 109
>BC051192-1|AAH51192.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 35.1 bits (77), Expect = 0.33
Identities = 28/99 (28%), Positives = 31/99 (31%), Gaps = 2/99 (2%)
Frame = +2
Query: 470 HAXGXGGGVXGXXP--GPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXR 643
H G GGG G PP G GP G P P P P Q +
Sbjct: 17 HRRGGGGGRGGLHDFRSPPPGMGLNQNR-GPMGPGPGQSGPKPPIPPPPPH-----QQQQ 70
Query: 644 XPPXTXPXXQAXXPXWKXPTPLXTPQKXSPPXXEXPXXP 760
PP P Q P P P Q+ PP + P
Sbjct: 71 QPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKP 109
>BC027708-1|AAH27708.1| 525|Homo sapiens SFPQ protein protein.
Length = 525
Score = 35.1 bits (77), Expect = 0.33
Identities = 28/99 (28%), Positives = 31/99 (31%), Gaps = 2/99 (2%)
Frame = +2
Query: 470 HAXGXGGGVXGXXP--GPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXR 643
H G GGG G PP G GP G P P P P Q +
Sbjct: 17 HRRGGGGGRGGLHDFRSPPPGMGLNQNR-GPMGPGPGQSGPKPPIPPPPPH-----QQQQ 70
Query: 644 XPPXTXPXXQAXXPXWKXPTPLXTPQKXSPPXXEXPXXP 760
PP P Q P P P Q+ PP + P
Sbjct: 71 QPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKP 109
>AL590434-2|CAI12467.1| 707|Homo sapiens splicing factor
proline/glutamine-rich (polypyrimidine tract binding
protein as protein.
Length = 707
Score = 35.1 bits (77), Expect = 0.33
Identities = 28/99 (28%), Positives = 31/99 (31%), Gaps = 2/99 (2%)
Frame = +2
Query: 470 HAXGXGGGVXGXXP--GPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXR 643
H G GGG G PP G GP G P P P P Q +
Sbjct: 17 HRRGGGGGRGGLHDFRSPPPGMGLNQNR-GPMGPGPGQSGPKPPIPPPPPH-----QQQQ 70
Query: 644 XPPXTXPXXQAXXPXWKXPTPLXTPQKXSPPXXEXPXXP 760
PP P Q P P P Q+ PP + P
Sbjct: 71 QPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKP 109
>BC139924-1|AAI39925.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.43
Identities = 25/81 (30%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Frame = +2
Query: 500 GXXPGPPXGXXPPXGTXGPXGARPXX--GXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQ 673
G PGP G P G P +RP G P P Q PP P
Sbjct: 229 GPGPGPGPGPGPGPGPAPPNHSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG- 287
Query: 674 AXXPXWKXPTPLXTPQKXSPP 736
P P TPQK PP
Sbjct: 288 ---PMANAAAPTSTPQKLIPP 305
>BC139917-1|AAI39918.1| 584|Homo sapiens SMARCA4 protein protein.
Length = 584
Score = 34.7 bits (76), Expect = 0.43
Identities = 25/81 (30%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Frame = +2
Query: 500 GXXPGPPXGXXPPXGTXGPXGARPXX--GXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQ 673
G PGP G P G P +RP G P P Q PP P
Sbjct: 229 GPGPGPGPGPGPGPGPAPPNHSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG- 287
Query: 674 AXXPXWKXPTPLXTPQKXSPP 736
P P TPQK PP
Sbjct: 288 ---PMANAAAPTSTPQKLIPP 305
>U29175-1|AAB40977.1| 1647|Homo sapiens transcriptional activator
protein.
Length = 1647
Score = 34.3 bits (75), Expect = 0.57
Identities = 25/81 (30%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Frame = +2
Query: 500 GXXPGPPXGXXPPXGTXGPXGARPXX--GXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQ 673
G PGP G P G P +RP G P P Q PP P
Sbjct: 229 GPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG- 287
Query: 674 AXXPXWKXPTPLXTPQKXSPP 736
P P TPQK PP
Sbjct: 288 ---PMANAAAPTSTPQKLIPP 305
>D26156-1|BAA05143.1| 1647|Homo sapiens transcriptional activator
hSNF2b protein.
Length = 1647
Score = 34.3 bits (75), Expect = 0.57
Identities = 25/81 (30%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Frame = +2
Query: 500 GXXPGPPXGXXPPXGTXGPXGARPXX--GXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQ 673
G PGP G P G P +RP G P P Q PP P
Sbjct: 229 GPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG- 287
Query: 674 AXXPXWKXPTPLXTPQKXSPP 736
P P TPQK PP
Sbjct: 288 ---PMANAAAPTSTPQKLIPP 305
>BC150298-1|AAI50299.1| 1647|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 1647
Score = 34.3 bits (75), Expect = 0.57
Identities = 25/81 (30%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Frame = +2
Query: 500 GXXPGPPXGXXPPXGTXGPXGARPXX--GXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQ 673
G PGP G P G P +RP G P P Q PP P
Sbjct: 229 GPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG- 287
Query: 674 AXXPXWKXPTPLXTPQKXSPP 736
P P TPQK PP
Sbjct: 288 ---PMANAAAPTSTPQKLIPP 305
>AF254822-2|AAG24789.1| 1647|Homo sapiens SMARCA4 isoform 1 protein.
Length = 1647
Score = 34.3 bits (75), Expect = 0.57
Identities = 25/81 (30%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Frame = +2
Query: 500 GXXPGPPXGXXPPXGTXGPXGARPXX--GXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQ 673
G PGP G P G P +RP G P P Q PP P
Sbjct: 229 GPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG- 287
Query: 674 AXXPXWKXPTPLXTPQKXSPP 736
P P TPQK PP
Sbjct: 288 ---PMANAAAPTSTPQKLIPP 305
>AF254822-1|AAG24790.1| 1679|Homo sapiens SMARCA4 isoform 2 protein.
Length = 1679
Score = 34.3 bits (75), Expect = 0.57
Identities = 25/81 (30%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Frame = +2
Query: 500 GXXPGPPXGXXPPXGTXGPXGARPXX--GXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQ 673
G PGP G P G P +RP G P P Q PP P
Sbjct: 229 GPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG- 287
Query: 674 AXXPXWKXPTPLXTPQKXSPP 736
P P TPQK PP
Sbjct: 288 ---PMANAAAPTSTPQKLIPP 305
>AB209313-1|BAD92550.1| 1164|Homo sapiens SWI/SNF-related
matrix-associated actin-dependent regulator of chromatin
a4 var protein.
Length = 1164
Score = 34.3 bits (75), Expect = 0.57
Identities = 25/81 (30%), Positives = 26/81 (32%), Gaps = 2/81 (2%)
Frame = +2
Query: 500 GXXPGPPXGXXPPXGTXGPXGARPXX--GXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQ 673
G PGP G P G P +RP G P P Q PP P
Sbjct: 186 GPGPGPGPGPGPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEG- 244
Query: 674 AXXPXWKXPTPLXTPQKXSPP 736
P P TPQK PP
Sbjct: 245 ---PMANAAAPTSTPQKLIPP 262
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 33.9 bits (74), Expect = 0.76
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -2
Query: 562 PXGPXXPXGGXGXXGGA-WXXAPHPPXXXPRVGGSP 458
P GP P GG G GGA P PP R GG P
Sbjct: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGP 45
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = +2
Query: 479 GXGGGVXGXXPGPPXGXXPPX----GTXGPXGARPXXGXKXDPXXP 604
G GGG G GPP G PP G GP G P G P P
Sbjct: 18 GGGGGAGGAGGGPPPG--PPGAGDRGGGGPCGGGPGGGSAGGPSQP 61
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 33.9 bits (74), Expect = 0.76
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -2
Query: 562 PXGPXXPXGGXGXXGGA-WXXAPHPPXXXPRVGGSP 458
P GP P GG G GGA P PP R GG P
Sbjct: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGP 45
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = +2
Query: 479 GXGGGVXGXXPGPPXGXXPPX----GTXGPXGARPXXGXKXDPXXP 604
G GGG G GPP G PP G GP G P G P P
Sbjct: 18 GGGGGAGGAGGGPPPG--PPGAGDRGGGGPGGGGPGGGSAGGPSQP 61
>AF093747-1|AAD29861.1| 115|Homo sapiens KH type splicing
regulatory protein protein.
Length = 115
Score = 33.9 bits (74), Expect = 0.76
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = -2
Query: 562 PXGPXXPXGGXGXXGGA-WXXAPHPPXXXPRVGGSP 458
P GP P GG G GGA P PP R GG P
Sbjct: 10 PPGPPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGP 45
Score = 32.3 bits (70), Expect = 2.3
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = +2
Query: 479 GXGGGVXGXXPGPPXGXXPPX----GTXGPXGARPXXGXKXDPXXP 604
G GGG G GPP G PP G GP G P G P P
Sbjct: 18 GGGGGAGGAGGGPPPG--PPGAGDRGGGGPCGGGPGGGSAGGPSQP 61
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 33.5 bits (73), Expect = 1.0
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = -2
Query: 658 GXGGXAGXLAXXXXXGXXXXXGVPFXXGXXXGPXGPXXPXGGXGXXGGAWXXAPHPPXXX 479
G G AG G G P G GP GP P G G G A P P
Sbjct: 862 GKDGPAGLRGFPGERGLPGTAGGPGLKGNE-GPSGPPGPAGSPGERGAAGSGGPIGPPGR 920
Query: 478 PRVGGSP 458
P G P
Sbjct: 921 PGPQGPP 927
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 33.5 bits (73), Expect = 1.0
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = -2
Query: 658 GXGGXAGXLAXXXXXGXXXXXGVPFXXGXXXGPXGPXXPXGGXGXXGGAWXXAPHPPXXX 479
G G AG G G P G GP GP P G G G A P P
Sbjct: 890 GKDGPAGLRGFPGERGLPGTAGGPGLKGNE-GPSGPPGPAGSPGERGAAGSGGPIGPPGR 948
Query: 478 PRVGGSP 458
P G P
Sbjct: 949 PGPQGPP 955
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 33.5 bits (73), Expect = 1.0
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = -2
Query: 658 GXGGXAGXLAXXXXXGXXXXXGVPFXXGXXXGPXGPXXPXGGXGXXGGAWXXAPHPPXXX 479
G G AG G G P G GP GP P G G G A P P
Sbjct: 890 GKDGPAGLRGFPGERGLPGTAGGPGLKGNE-GPSGPPGPAGSPGERGAAGSGGPIGPPGR 948
Query: 478 PRVGGSP 458
P G P
Sbjct: 949 PGPQGPP 955
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 33.5 bits (73), Expect = 1.0
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = -2
Query: 658 GXGGXAGXLAXXXXXGXXXXXGVPFXXGXXXGPXGPXXPXGGXGXXGGAWXXAPHPPXXX 479
G G AG G G P G GP GP P G G G A P P
Sbjct: 890 GKDGPAGLRGFPGERGLPGTAGGPGLKGNE-GPSGPPGPAGSPGERGAAGSGGPIGPPGR 948
Query: 478 PRVGGSP 458
P G P
Sbjct: 949 PGPQGPP 955
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 33.5 bits (73), Expect = 1.0
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = -2
Query: 658 GXGGXAGXLAXXXXXGXXXXXGVPFXXGXXXGPXGPXXPXGGXGXXGGAWXXAPHPPXXX 479
G G AG G G P G GP GP P G G G A P P
Sbjct: 890 GKDGPAGLRGFPGERGLPGTAGGPGLKGNE-GPSGPPGPAGSPGERGAAGSGGPIGPPGR 948
Query: 478 PRVGGSP 458
P G P
Sbjct: 949 PGPQGPP 955
>AL031228-16|CAA20240.1| 1736|Homo sapiens collagen type XI alpha 2
protein.
Length = 1736
Score = 33.5 bits (73), Expect = 1.0
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = -2
Query: 658 GXGGXAGXLAXXXXXGXXXXXGVPFXXGXXXGPXGPXXPXGGXGXXGGAWXXAPHPPXXX 479
G G AG G G P G GP GP P G G G A P P
Sbjct: 976 GKDGPAGLRGFPGERGLPGTAGGPGLKGNE-GPSGPPGPAGSPGERGAAGSGGPIGPPGR 1034
Query: 478 PRVGGSP 458
P G P
Sbjct: 1035 PGPQGPP 1041
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 33.5 bits (73), Expect = 1.0
Identities = 22/67 (32%), Positives = 22/67 (32%)
Frame = -2
Query: 658 GXGGXAGXLAXXXXXGXXXXXGVPFXXGXXXGPXGPXXPXGGXGXXGGAWXXAPHPPXXX 479
G G AG G G P G GP GP P G G G A P P
Sbjct: 890 GKDGPAGLRGFPGERGLPGTAGGPGLKGNE-GPSGPPGPAGSPGERGAAGSGGPIGPPGR 948
Query: 478 PRVGGSP 458
P G P
Sbjct: 949 PGPQGPP 955
>J04177-1|AAA51891.1| 1806|Homo sapiens COL11A1 protein.
Length = 1806
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -2
Query: 661 SGXGGXAGXLAXXXXXGXXXXXGVPFXXGXXXGPXGPXXPXGGXGXXGGAWXXAPHPPXX 482
SG G AG G G P G GP GP P G G G A P
Sbjct: 1017 SGKDGPAGLRGFPGERGLPGAQGAPGLKGGE-GPQGPPGPVGSPGERGSAGTAGPIGLRG 1075
Query: 481 XPRVGGSP 458
P G P
Sbjct: 1076 RPGPQGPP 1083
>BC117697-1|AAI17698.1| 1690|Homo sapiens COL11A1 protein protein.
Length = 1690
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -2
Query: 661 SGXGGXAGXLAXXXXXGXXXXXGVPFXXGXXXGPXGPXXPXGGXGXXGGAWXXAPHPPXX 482
SG G AG G G P G GP GP P G G G A P
Sbjct: 901 SGKDGPAGLRGFPGERGLPGAQGAPGLKGGE-GPQGPPGPVGSPGERGSAGTAGPIGLPG 959
Query: 481 XPRVGGSP 458
P G P
Sbjct: 960 RPGPQGPP 967
>BC096212-1|AAH96212.1| 162|Homo sapiens PRB3 protein protein.
Length = 162
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/78 (28%), Positives = 23/78 (29%), Gaps = 3/78 (3%)
Frame = +2
Query: 512 GPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXRXPP---XTXPXXQAXX 682
GPP P G P G G P P P + R PP P
Sbjct: 70 GPPPRPGKPEGQP-PQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPPGRPQGPPPPGGN 128
Query: 683 PXWKXPTPLXTPQKXSPP 736
P P P PQ PP
Sbjct: 129 PQQPLPPPAGKPQGPPPP 146
>AL627203-1|CAH73908.1| 1806|Homo sapiens collagen type XI alpha 1
protein.
Length = 1806
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -2
Query: 661 SGXGGXAGXLAXXXXXGXXXXXGVPFXXGXXXGPXGPXXPXGGXGXXGGAWXXAPHPPXX 482
SG G AG G G P G GP GP P G G G A P
Sbjct: 1017 SGKDGPAGLRGFPGERGLPGAQGAPGLKGGE-GPQGPPGPVGSPGERGSAGTAGPIGLPG 1075
Query: 481 XPRVGGSP 458
P G P
Sbjct: 1076 RPGPQGPP 1083
>AF101112-3|AAF04724.1| 1767|Homo sapiens collagen type XI alpha-1
protein.
Length = 1767
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -2
Query: 661 SGXGGXAGXLAXXXXXGXXXXXGVPFXXGXXXGPXGPXXPXGGXGXXGGAWXXAPHPPXX 482
SG G AG G G P G GP GP P G G G A P
Sbjct: 978 SGKDGPAGLRGFPGERGLPGAQGAPGLKGGE-GPQGPPGPVGSPGERGSAGTAGPIGLPG 1036
Query: 481 XPRVGGSP 458
P G P
Sbjct: 1037 RPGPQGPP 1044
>AF101112-2|AAF04726.1| 1818|Homo sapiens collagen type XI alpha-a
isoform B protein.
Length = 1818
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -2
Query: 661 SGXGGXAGXLAXXXXXGXXXXXGVPFXXGXXXGPXGPXXPXGGXGXXGGAWXXAPHPPXX 482
SG G AG G G P G GP GP P G G G A P
Sbjct: 1029 SGKDGPAGLRGFPGERGLPGAQGAPGLKGGE-GPQGPPGPVGSPGERGSAGTAGPIGLPG 1087
Query: 481 XPRVGGSP 458
P G P
Sbjct: 1088 RPGPQGPP 1095
>AF101112-1|AAF04725.1| 1806|Homo sapiens collagen type XI alpha-1
isoform A protein.
Length = 1806
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -2
Query: 661 SGXGGXAGXLAXXXXXGXXXXXGVPFXXGXXXGPXGPXXPXGGXGXXGGAWXXAPHPPXX 482
SG G AG G G P G GP GP P G G G A P
Sbjct: 1017 SGKDGPAGLRGFPGERGLPGAQGAPGLKGGE-GPQGPPGPVGSPGERGSAGTAGPIGLPG 1075
Query: 481 XPRVGGSP 458
P G P
Sbjct: 1076 RPGPQGPP 1083
>AB208844-1|BAD92081.1| 1017|Homo sapiens alpha 1 type XI collagen
isoform C preproprotein variant protein.
Length = 1017
Score = 32.3 bits (70), Expect = 2.3
Identities = 22/68 (32%), Positives = 22/68 (32%)
Frame = -2
Query: 661 SGXGGXAGXLAXXXXXGXXXXXGVPFXXGXXXGPXGPXXPXGGXGXXGGAWXXAPHPPXX 482
SG G AG G G P G GP GP P G G G A P
Sbjct: 228 SGKDGPAGLRGFPGERGLPGAQGAPGLKGGE-GPQGPPGPVGSPGERGSAGTAGPIGLPG 286
Query: 481 XPRVGGSP 458
P G P
Sbjct: 287 RPGPQGPP 294
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 579 PXXGRAPXGPXVPXGGXXPXGGPGXXPXTPPPXP 478
P G P GP P G P GP PPP P
Sbjct: 287 PPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPP 320
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 579 PXXGRAPXGPXVPXGGXXPXGGPGXXPXTPPPXP 478
P G P GP P G P GP PPP P
Sbjct: 287 PPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPP 320
>M26576-1|AAA53098.1| 1669|Homo sapiens alpha-1 type IV collagen
protein.
Length = 1669
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
PP G G + P P P G GP GP P G P
Sbjct: 1394 PPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPP 1437
>M11315-1|AAA52042.1| 411|Homo sapiens COL4A1 protein.
Length = 411
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
PP G G + P P P G GP GP P G P
Sbjct: 136 PPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPP 179
>M10940-1|AAA52006.1| 414|Homo sapiens COL4A1 protein.
Length = 414
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
PP G G + P P P G GP GP P G P
Sbjct: 139 PPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPP 182
>BC151220-1|AAI51221.1| 1669|Homo sapiens COL4A1 protein protein.
Length = 1669
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
PP G G + P P P G GP GP P G P
Sbjct: 1394 PPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPP 1437
>BC110393-1|AAI10394.1| 439|Homo sapiens EMI domain containing 2
protein.
Length = 439
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTPXXXXXP 614
PP G G Q P P G GP GP P G P P
Sbjct: 207 PPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
>BC109254-1|AAI09255.1| 439|Homo sapiens EMI domain containing 2
protein.
Length = 439
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTPXXXXXP 614
PP G G Q P P G GP GP P G P P
Sbjct: 207 PPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 256
>BC047305-1|AAH47305.1| 1075|Homo sapiens COL4A1 protein protein.
Length = 1075
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
PP G G + P P P G GP GP P G P
Sbjct: 800 PPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPP 843
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 579 PXXGRAPXGPXVPXGGXXPXGGPGXXPXTPPPXP 478
P G P GP P G P GP PPP P
Sbjct: 214 PPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPP 247
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 579 PXXGRAPXGPXVPXGGXXPXGGPGXXPXTPPPXP 478
P G P GP P G P GP PPP P
Sbjct: 324 PPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPP 357
>AL390755-2|CAM20295.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
PP G G + P P P G GP GP P G P
Sbjct: 1043 PPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPP 1086
>AL390755-1|CAH74130.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
PP G G + P P P G GP GP P G P
Sbjct: 1394 PPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPP 1437
>AL161773-2|CAM14222.1| 1318|Homo sapiens collagen type IV alpha 1
protein.
Length = 1318
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
PP G G + P P P G GP GP P G P
Sbjct: 1043 PPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPP 1086
>AL161773-1|CAH71365.1| 1669|Homo sapiens collagen type IV alpha 1
protein.
Length = 1669
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
PP G G + P P P G GP GP P G P
Sbjct: 1394 PPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPP 1437
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 31.5 bits (68), Expect = 4.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 579 PXXGRAPXGPXVPXGGXXPXGGPGXXPXTPPPXP 478
P G P GP P G P GP PPP P
Sbjct: 287 PPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPP 320
>AJ416091-1|CAC94778.1| 441|Homo sapiens putative emu2 protein
protein.
Length = 441
Score = 31.5 bits (68), Expect = 4.0
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTPXXXXXP 614
PP G G Q P P G GP GP P G P P
Sbjct: 209 PPGPAGPPGSKGDRGQTGEKGPAGPPGLLGPPGPRGLPGEMGRPGPPGPP 258
>AB209646-1|BAD92883.1| 847|Homo sapiens COL4A1 protein variant
protein.
Length = 847
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/44 (34%), Positives = 16/44 (36%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
PP G G + P P P G GP GP P G P
Sbjct: 572 PPGIPGFDGAPGQKGEMGPAGPTGPRGFPGPPGPDGLPGSMGPP 615
>U73778-1|AAC51244.1| 3063|Homo sapiens collagen type XII alpha-1
protein.
Length = 3063
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 535 PRGDXGAXG--GPXXXRXEXGPPXPXXTPXP 621
PRG+ G G GP R + GPP P P P
Sbjct: 2763 PRGERGISGAIGPPGPRGDIGPPGPQGPPGP 2793
>M76729-1|AAA59993.1| 1838|Homo sapiens pro-alpha-1 type V collagen
protein.
Length = 1838
Score = 31.1 bits (67), Expect = 5.3
Identities = 24/86 (27%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +2
Query: 512 GPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQAXXP-X 688
GPP PP G GP G+ G DP P P Q P
Sbjct: 1321 GPPGPKGPP-GDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGP 1379
Query: 689 WKXPTPLXTPQKXSPPXXEXPXXPXG 766
P P P K PP P G
Sbjct: 1380 TGEPGPSGPPGKRGPPGPAGPEGRQG 1405
>D90279-1|BAA14323.1| 1838|Homo sapiens collagen alpha 1(V) chain
precursor protein.
Length = 1838
Score = 31.1 bits (67), Expect = 5.3
Identities = 24/86 (27%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +2
Query: 512 GPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQAXXP-X 688
GPP PP G GP G+ G DP P P Q P
Sbjct: 1321 GPPGPKGPP-GDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGP 1379
Query: 689 WKXPTPLXTPQKXSPPXXEXPXXPXG 766
P P P K PP P G
Sbjct: 1380 TGEPGPSGPPGKRGPPGPAGPEGRQG 1405
>BC117170-1|AAI17171.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 535 PRGDXGAXG--GPXXXRXEXGPPXPXXTPXP 621
PRG+ G G GP R + GPP P P P
Sbjct: 1448 PRGEKGFRGETGPQGPRGQPGPPGPPGAPGP 1478
>BC113654-1|AAI13655.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 535 PRGDXGAXG--GPXXXRXEXGPPXPXXTPXP 621
PRG+ G G GP R + GPP P P P
Sbjct: 1448 PRGEKGFRGETGPQGPRGQPGPPGPPGAPGP 1478
>BC042075-1|AAH42075.1| 854|Homo sapiens COL22A1 protein protein.
Length = 854
Score = 31.1 bits (67), Expect = 5.3
Identities = 25/81 (30%), Positives = 28/81 (34%)
Frame = +2
Query: 509 PGPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQAXXPX 688
PGPP G P G+ G GA G K D P P PP A P
Sbjct: 386 PGPP-GIAGPQGSQGERGADGEVGQKGDQGHPGVP-GFMGPPGNPGPPGADGIAGAAGP- 442
Query: 689 WKXPTPLXTPQKXSPPXXEXP 751
P +P K PP + P
Sbjct: 443 ---PGIQGSPGKEGPPGPQGP 460
>BC008798-1|AAH08798.1| 258|Homo sapiens complement component 1, q
subcomponent-like 1 protein.
Length = 258
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 459 GDPPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTPXXXXXP 614
G PP G G + P P G GP GP P G P P
Sbjct: 57 GAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPP 108
>BC008760-1|AAH08760.3| 591|Homo sapiens COL5A1 protein protein.
Length = 591
Score = 31.1 bits (67), Expect = 5.3
Identities = 24/86 (27%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +2
Query: 512 GPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQAXXP-X 688
GPP PP G GP G+ G DP P P Q P
Sbjct: 74 GPPGPKGPP-GDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGP 132
Query: 689 WKXPTPLXTPQKXSPPXXEXPXXPXG 766
P P P K PP P G
Sbjct: 133 TGEPGPSGPPGKRGPPGPAGPEGRQG 158
>AY244357-1|AAP80185.1| 1714|Homo sapiens alpha 1 type XXIV collagen
precursor protein.
Length = 1714
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 535 PRGDXGAXG--GPXXXRXEXGPPXPXXTPXP 621
PRG+ G G GP R + GPP P P P
Sbjct: 1448 PRGEKGFRGETGPQGPRGQPGPPGPPGAPGP 1478
>AL645768-1|CAI17261.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 31.1 bits (67), Expect = 5.3
Identities = 24/86 (27%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +2
Query: 512 GPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQAXXP-X 688
GPP PP G GP G+ G DP P P Q P
Sbjct: 1321 GPPGPKGPP-GDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGP 1379
Query: 689 WKXPTPLXTPQKXSPPXXEXPXXPXG 766
P P P K PP P G
Sbjct: 1380 TGEPGPSGPPGKRGPPGPAGPEGRQG 1405
>AL603650-2|CAI39859.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 31.1 bits (67), Expect = 5.3
Identities = 24/86 (27%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +2
Query: 512 GPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQAXXP-X 688
GPP PP G GP G+ G DP P P Q P
Sbjct: 1321 GPPGPKGPP-GDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGP 1379
Query: 689 WKXPTPLXTPQKXSPPXXEXPXXPXG 766
P P P K PP P G
Sbjct: 1380 TGEPGPSGPPGKRGPPGPAGPEGRQG 1405
>AL591890-1|CAI15483.1| 1838|Homo sapiens collagen type V alpha 1
protein.
Length = 1838
Score = 31.1 bits (67), Expect = 5.3
Identities = 24/86 (27%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +2
Query: 512 GPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQAXXP-X 688
GPP PP G GP G+ G DP P P Q P
Sbjct: 1321 GPPGPKGPP-GDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGP 1379
Query: 689 WKXPTPLXTPQKXSPPXXEXPXXPXG 766
P P P K PP P G
Sbjct: 1380 TGEPGPSGPPGKRGPPGPAGPEGRQG 1405
>AL445427-1|CAI19120.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 535 PRGDXGAXG--GPXXXRXEXGPPXPXXTPXP 621
PRG+ G G GP R + GPP P P P
Sbjct: 1448 PRGEKGFRGETGPQGPRGQPGPPGPPGAPGP 1478
>AL359971-1|CAI16233.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 535 PRGDXGAXG--GPXXXRXEXGPPXPXXTPXP 621
PRG+ G G GP R + GPP P P P
Sbjct: 1448 PRGEKGFRGETGPQGPRGQPGPPGPPGAPGP 1478
>AL356059-1|CAH71121.1| 1714|Homo sapiens collagen, type XXIV, alpha 1
protein.
Length = 1714
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 535 PRGDXGAXG--GPXXXRXEXGPPXPXXTPXP 621
PRG+ G G GP R + GPP P P P
Sbjct: 1448 PRGEKGFRGETGPQGPRGQPGPPGPPGAPGP 1478
>AL354664-1|CAH71310.1| 3063|Homo sapiens collagen type XII alpha 1
protein.
Length = 3063
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 535 PRGDXGAXG--GPXXXRXEXGPPXPXXTPXP 621
PRG+ G G GP R + GPP P P P
Sbjct: 2763 PRGERGISGAIGPPGPRGDIGPPGPQGPPGP 2793
>AL096771-3|CAI19908.1| 3063|Homo sapiens collagen type XII alpha 1
protein.
Length = 3063
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 535 PRGDXGAXG--GPXXXRXEXGPPXPXXTPXP 621
PRG+ G G GP R + GPP P P P
Sbjct: 2763 PRGERGISGAIGPPGPRGDIGPPGPQGPPGP 2793
>AL080250-2|CAI19898.1| 3063|Homo sapiens collagen type XII alpha 1
protein.
Length = 3063
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = +1
Query: 535 PRGDXGAXG--GPXXXRXEXGPPXPXXTPXP 621
PRG+ G G GP R + GPP P P P
Sbjct: 2763 PRGERGISGAIGPPGPRGDIGPPGPQGPPGP 2793
>AF410771-1|AAK95248.1| 258|Homo sapiens C1q-related factor
protein.
Length = 258
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 459 GDPPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTPXXXXXP 614
G PP G G + P P G GP GP P G P P
Sbjct: 57 GAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPP 108
>AF095154-1|AAC64186.1| 258|Homo sapiens C1q-related factor
protein.
Length = 258
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +3
Query: 459 GDPPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTPXXXXXP 614
G PP G G + P P G GP GP P G P P
Sbjct: 57 GAPPPSTLVQGPQGKPGRTGKPGPPGPPGDPGPPGPVGPPGEKGEPGKPGPP 108
>AB209864-1|BAD93101.1| 1792|Homo sapiens Pro-alpha-1 type V collagen
variant protein.
Length = 1792
Score = 31.1 bits (67), Expect = 5.3
Identities = 24/86 (27%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +2
Query: 512 GPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQAXXP-X 688
GPP PP G GP G+ G DP P P Q P
Sbjct: 1275 GPPGPKGPP-GDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGP 1333
Query: 689 WKXPTPLXTPQKXSPPXXEXPXXPXG 766
P P P K PP P G
Sbjct: 1334 TGEPGPSGPPGKRGPPGPAGPEGRQG 1359
>M69008-1|AAA52754.1| 623|Homo sapiens alpha-1 type XIII collagen
protein.
Length = 623
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 509 PGPPXGXXPPXGTXGPXGARPXXGXKXDP 595
PGPP G P G GP G + G K DP
Sbjct: 530 PGPP-GTPGPIGVPGPAGPKGERGSKGDP 557
>M33653-1|AAA52047.1| 245|Homo sapiens alpha-2 type IV collagen
protein.
Length = 245
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 509 PGPPXGXXPPXGTXGPXGARPXXGXKXDP 595
PGPP G P G GP G + G K DP
Sbjct: 152 PGPP-GTPGPIGVPGPAGPKGERGSKGDP 179
>M20803-4|AAA51990.1| 152|Homo sapiens COL13A1 protein.
Length = 152
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 509 PGPPXGXXPPXGTXGPXGARPXXGXKXDP 595
PGPP G P G GP G + G K DP
Sbjct: 59 PGPP-GTPGPIGVPGPAGPKGERGSKGDP 86
>M20803-2|AAA51988.1| 153|Homo sapiens COL13A1 protein.
Length = 153
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 509 PGPPXGXXPPXGTXGPXGARPXXGXKXDP 595
PGPP G P G GP G + G K DP
Sbjct: 60 PGPP-GTPGPIGVPGPAGPKGERGSKGDP 87
>M20803-1|AAA51987.1| 167|Homo sapiens COL13A1 protein.
Length = 167
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 509 PGPPXGXXPPXGTXGPXGARPXXGXKXDP 595
PGPP G P G GP G + G K DP
Sbjct: 74 PGPP-GTPGPIGVPGPAGPKGERGSKGDP 101
>AL138925-2|CAI15451.2| 695|Homo sapiens collagen type XIII alpha 1
protein.
Length = 695
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 509 PGPPXGXXPPXGTXGPXGARPXXGXKXDP 595
PGPP G P G GP G + G K DP
Sbjct: 602 PGPP-GTPGPIGVPGPAGPKGERGSKGDP 629
>AL138925-1|CAI15450.1| 717|Homo sapiens collagen type XIII alpha 1
protein.
Length = 717
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 509 PGPPXGXXPPXGTXGPXGARPXXGXKXDP 595
PGPP G P G GP G + G K DP
Sbjct: 624 PGPP-GTPGPIGVPGPAGPKGERGSKGDP 651
>AJ293624-1|CAC00688.1| 717|Homo sapiens type XIII collagen
protein.
Length = 717
Score = 30.7 bits (66), Expect = 7.1
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 509 PGPPXGXXPPXGTXGPXGARPXXGXKXDP 595
PGPP G P G GP G + G K DP
Sbjct: 624 PGPP-GTPGPIGVPGPAGPKGERGSKGDP 651
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 30.3 bits (65), Expect = 9.3
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 459 GDPPTRGXXX--GGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTPXXXXXP 614
G P RG G GA A P P G GP GP P G P P
Sbjct: 482 GPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLP 535
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 30.3 bits (65), Expect = 9.3
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 459 GDPPTRGXXX--GGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTPXXXXXP 614
G P RG G GA A P P G GP GP P G P P
Sbjct: 482 GPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLP 535
>X15332-1|CAA33387.1| 1078|Homo sapiens alpha-1 (III) collagen
protein.
Length = 1078
Score = 30.3 bits (65), Expect = 9.3
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 459 GDPPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
G P + G G G QA P P P G GP GP G P
Sbjct: 45 GSPGSPGYQ-GPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRP 89
>X14420-1|CAA32583.1| 1466|Homo sapiens prepro-alpha-1 type 3
collagen protein.
Length = 1466
Score = 30.3 bits (65), Expect = 9.3
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 459 GDPPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
G P + G G G QA P P P G GP GP G P
Sbjct: 192 GSPGSPGYQ-GPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRP 236
>M65158-1|AAA96439.1| 625|Homo sapiens type VII collagen protein.
Length = 625
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +3
Query: 459 GDPPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
G+P G GG G P P G GP GP P G P
Sbjct: 533 GEPGAPGQVIGGEGPGLPGRKGDPGPS-GPPGPRGPLGDPGPRGPP 577
>M20789-1|AAB59373.1| 589|Homo sapiens alpha-1 type I collagen
protein.
Length = 589
Score = 30.3 bits (65), Expect = 9.3
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 459 GDPPTRGXXX--GGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTPXXXXXP 614
G P RG G GA A P P G GP GP P G P P
Sbjct: 482 GPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLP 535
>L23982-1|AAA58965.1| 2912|Homo sapiens collagen type VII protein.
Length = 2912
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +3
Query: 459 GDPPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
G+P G GG G P P G GP GP P G P
Sbjct: 1347 GEPGAPGQVIGGEGPGLPGRKGDPGPS-GPPGPRGPLGDPGPRGPP 1391
>L02870-1|AAA75438.1| 2944|Homo sapiens alpha-1 type VII collagen
protein.
Length = 2944
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +3
Query: 459 GDPPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
G+P G GG G P P G GP GP P G P
Sbjct: 1347 GEPGAPGQVIGGEGPGLPGRKGDPGPS-GPPGPRGPLGDPGPRGPP 1391
>K03179-1|AAA51847.1| 136|Homo sapiens COL1A1 protein.
Length = 136
Score = 30.3 bits (65), Expect = 9.3
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 459 GDPPTRGXXX--GGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTPXXXXXP 614
G P RG G GA A P P G GP GP P G P P
Sbjct: 11 GPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLP 64
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.3 bits (65), Expect = 9.3
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 459 GDPPTRGXXX--GGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTPXXXXXP 614
G P RG G GA A P P G GP GP P G P P
Sbjct: 58 GPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLP 111
>BC099645-1|AAH99645.1| 657|Homo sapiens COL8A2 protein protein.
Length = 657
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
PP G A PP P P G GP GP P G P
Sbjct: 445 PPGEGRAGEPGTAGPTGPPGVPGSP-GITGPPGPPGPPGPPGAP 487
>BC096297-1|AAH96297.1| 657|Homo sapiens COL8A2 protein protein.
Length = 657
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
PP G A PP P P G GP GP P G P
Sbjct: 445 PPGEGRAGEPGTAGPTGPPGVPGSP-GITGPPGPPGPPGPPGAP 487
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 30.3 bits (65), Expect = 9.3
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 459 GDPPTRGXXX--GGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTPXXXXXP 614
G P RG G GA A P P G GP GP P G P P
Sbjct: 482 GPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLP 535
>BC034003-1|AAH34003.1| 600|Homo sapiens PRR12 protein protein.
Length = 600
Score = 30.3 bits (65), Expect = 9.3
Identities = 24/84 (28%), Positives = 24/84 (28%)
Frame = +2
Query: 509 PGPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQAXXPX 688
PGPP P P K P P P PP P Q P
Sbjct: 67 PGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQ------PPPPPPPPQPALPS 120
Query: 689 WKXPTPLXTPQKXSPPXXEXPXXP 760
P PL P SPP P P
Sbjct: 121 ---PPPLVAPTPSSPPPPPLPPPP 141
>BC028178-1|AAH28178.1| 1163|Homo sapiens COL3A1 protein protein.
Length = 1163
Score = 30.3 bits (65), Expect = 9.3
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 459 GDPPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
G P + G G G QA P P P G GP GP G P
Sbjct: 192 GSPGSPGYQ-GPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRP 236
>AY016295-2|AAL13167.1| 1466|Homo sapiens type III preprocollagen
alpha 1 chain protein.
Length = 1466
Score = 30.3 bits (65), Expect = 9.3
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 459 GDPPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
G P + G G G QA P P P G GP GP G P
Sbjct: 192 GSPGSPGYQ-GPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRP 236
>AL138787-1|CAI22267.1| 703|Homo sapiens collagen type VIII alpha 2
protein.
Length = 703
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
PP G A PP P P G GP GP P G P
Sbjct: 491 PPGEGRAGEPGTAGPTGPPGVPGSP-GITGPPGPPGPPGPPGAP 533
>AK074129-1|BAB84955.1| 705|Homo sapiens FLJ00201 protein protein.
Length = 705
Score = 30.3 bits (65), Expect = 9.3
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 465 PPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
PP G A PP P P G GP GP P G P
Sbjct: 493 PPGEGRAGEPGTAGPTGPPGVPGSP-GITGPPGPPGPPGPPGAP 535
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 30.3 bits (65), Expect = 9.3
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 459 GDPPTRGXXX--GGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTPXXXXXP 614
G P RG G GA A P P G GP GP P G P P
Sbjct: 479 GPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLP 532
>AC066694-1|AAY24164.1| 1466|Homo sapiens unknown protein.
Length = 1466
Score = 30.3 bits (65), Expect = 9.3
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 459 GDPPTRGXXXGGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTP 596
G P + G G G QA P P P G GP GP G P
Sbjct: 192 GSPGSPGYQ-GPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRP 236
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 30.3 bits (65), Expect = 9.3
Identities = 19/54 (35%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 459 GDPPTRGXXX--GGXGAXXQAPPXXPXPPXGXXGPXGPXXXPXXXGTPXXXXXP 614
G P RG G GA A P P G GP GP P G P P
Sbjct: 485 GPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLP 538
>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
Length = 1217
Score = 30.3 bits (65), Expect = 9.3
Identities = 24/84 (28%), Positives = 24/84 (28%)
Frame = +2
Query: 509 PGPPXGXXPPXGTXGPXGARPXXGXKXDPXXPXXPXXXXXXQXXRXPPXTXPXXQAXXPX 688
PGPP P P K P P P PP P Q P
Sbjct: 612 PGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQ------PPPPPPPPQPALPS 665
Query: 689 WKXPTPLXTPQKXSPPXXEXPXXP 760
P PL P SPP P P
Sbjct: 666 ---PPPLVAPTPSSPPPPPLPPPP 686
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,478,001
Number of Sequences: 237096
Number of extensions: 1110715
Number of successful extensions: 20240
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 3884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16147
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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