Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_A18
         (890 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3255|AAF49088.1|  168|Drosophila melanogaster CG14182-P...   264   9e-71

>AE014296-3255|AAF49088.1|  168|Drosophila melanogaster CG14182-PA
           protein.
          Length = 168

 Score =  264 bits (648), Expect = 9e-71
 Identities = 120/168 (71%), Positives = 138/168 (82%), Gaps = 1/168 (0%)
 Frame = +1

Query: 205 MDKLTVISATLFMAADVFAIVSLAMPDWIITDIG-GDTRLGLMWSCMTLYNRPQVCFTPD 381
           MDKLT ISATLFMAADVFAIVSLA+PDWIIT+ G GD RLGLMW+CMTLYNRPQVC+TP+
Sbjct: 1   MDKLTTISATLFMAADVFAIVSLALPDWIITESGTGDIRLGLMWTCMTLYNRPQVCYTPE 60

Query: 382 LQPEWXXXXXXXXXXXXXXXXXXXXXASSHFDRNVVPYARWVGFAAMVVFCLAAVIFPMG 561
           LQPEW                     ASS  +RNV+PYARWVGF AMV+FC+AAV+FP+G
Sbjct: 61  LQPEWLIALICIFVGCICVTTTVILLASSSCNRNVIPYARWVGFTAMVLFCMAAVVFPLG 120

Query: 562 FHVDEIGGQPYQLPNSHQVGISYILFVLSLWITVISELFAGKVCLPHF 705
           FHV+EIGGQ YQLPN+ ++GISYI+FVL+LWITV+SELFAGKVCLPHF
Sbjct: 121 FHVEEIGGQAYQLPNTFKIGISYIMFVLALWITVVSELFAGKVCLPHF 168


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,555,288
Number of Sequences: 53049
Number of extensions: 797926
Number of successful extensions: 1458
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1456
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4352837424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)