Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_A18
         (890 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81583-7|CAB04668.1|  268|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AF040646-2|AAK31538.1|  275|Caenorhabditis elegans Hypothetical ...    29   4.5  
U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z68880-9|CAA93099.1|  255|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z68879-12|CAA93091.1|  255|Caenorhabditis elegans Hypothetical p...    28   7.8  

>Z81583-7|CAB04668.1|  268|Caenorhabditis elegans Hypothetical
           protein T02G6.7 protein.
          Length = 268

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +2

Query: 59  YPFTHNFSIEIIIMNKSILLSIYINI*RIFLVIENYNFKSSLYEFYSQKWI 211
           +PFT N    + I+N+   L I+IN  ++F     +   SS +E Y + WI
Sbjct: 208 WPFTPNSQFNMTIVNQVAALQIHIN--QVFFTSYTHR-TSSPFEDYVKLWI 255


>AF040646-2|AAK31538.1|  275|Caenorhabditis elegans Hypothetical
           protein H17B01.3 protein.
          Length = 275

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +1

Query: 541 AVIFPMGFHVDEIGGQPYQLPNSHQV 618
           ++ F +G   +E G  PY++P +HQV
Sbjct: 224 SIQFGLGIARNECGSDPYEIPGAHQV 249


>U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical
           protein F25E2.2 protein.
          Length = 624

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 708 LKVWETHFPSKKFRYHCYPKGENK*Y 631
           L+ WETH   K F+YHC   G N  Y
Sbjct: 66  LQQWETH-NEKWFKYHCVIDGTNAQY 90


>Z68880-9|CAA93099.1|  255|Caenorhabditis elegans Hypothetical
           protein K08F4.9 protein.
          Length = 255

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
 Frame = +1

Query: 190 ILFTKMDKLTVISATLFMAAD-----VFAIVSLAMPDWIITDIGG 309
           +L  KM K+ ++S +  MAAD     +  +++   P W+ TD+GG
Sbjct: 172 LLAYKMSKVAMLSFSRSMAADFKRLEIPVLITNIHPGWVQTDMGG 216


>Z68879-12|CAA93091.1|  255|Caenorhabditis elegans Hypothetical
           protein K08F4.9 protein.
          Length = 255

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
 Frame = +1

Query: 190 ILFTKMDKLTVISATLFMAAD-----VFAIVSLAMPDWIITDIGG 309
           +L  KM K+ ++S +  MAAD     +  +++   P W+ TD+GG
Sbjct: 172 LLAYKMSKVAMLSFSRSMAADFKRLEIPVLITNIHPGWVQTDMGG 216


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,652,795
Number of Sequences: 27780
Number of extensions: 423967
Number of successful extensions: 848
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 848
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)