Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_A17
         (933 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81088-5|CAB03133.1|  215|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical pr...    29   4.8  
X74838-1|CAA52832.1|  231|Caenorhabditis elegans cuticlin 2 prot...    29   4.8  
AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical...    28   8.3  

>Z81088-5|CAB03133.1|  215|Caenorhabditis elegans Hypothetical
           protein F53F1.5 protein.
          Length = 215

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +2

Query: 485 FFXXXGGGGGXFXXXKXPPPPXGXG 559
           F    GGGGG       PPPP G G
Sbjct: 17  FLLPSGGGGGCGCAPPPPPPPCGCG 41


>Z81088-4|CAB03125.1|  105|Caenorhabditis elegans Hypothetical
           protein F53F1.4 protein.
          Length = 105

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +2

Query: 485 FFXXXGGGGGXFXXXKXPPPPXGXG 559
           F    GGGGG       PPPP G G
Sbjct: 17  FLLPSGGGGGCGCAPPPPPPPCGCG 41


>X74838-1|CAA52832.1|  231|Caenorhabditis elegans cuticlin 2
           protein.
          Length = 231

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 12/25 (48%), Positives = 12/25 (48%)
 Frame = +2

Query: 485 FFXXXGGGGGXFXXXKXPPPPXGXG 559
           F    GGGGG       PPPP G G
Sbjct: 17  FLLPSGGGGGCGCAPPPPPPPCGCG 41


>AC024790-13|AAL32247.1|  311|Caenorhabditis elegans Hypothetical
           protein Y47D7A.13 protein.
          Length = 311

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = +2

Query: 482 FFFXXXGGGGGXFXXXKXPPPPXGXG 559
           F F   GGGGG       PPPP G G
Sbjct: 16  FLFNLLGGGGGG-CCAPPPPPPCGGG 40


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,573,451
Number of Sequences: 27780
Number of extensions: 127235
Number of successful extensions: 718
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 563
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)