Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP12_F_A13
         (822 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000891-1|AAH00891.1|  296|Homo sapiens mitochondrial ribosomal...   204   2e-52
CR533531-1|CAG38562.1|  296|Homo sapiens MRPL15 protein.              203   7e-52
U30246-1|AAC50561.1| 1212|Homo sapiens bumetanide-sensitive Na-K...    30   8.8  
BC033003-1|AAH33003.1| 1150|Homo sapiens SLC12A2 protein protein.      30   8.8  
AY280459-1|AAP33906.1| 1212|Homo sapiens bumetanide-sensitive Na...    30   8.8  

>BC000891-1|AAH00891.1|  296|Homo sapiens mitochondrial ribosomal
           protein L15 protein.
          Length = 296

 Score =  204 bits (499), Expect = 2e-52
 Identities = 98/193 (50%), Positives = 130/193 (67%)
 Frame = +3

Query: 240 KSLSMLRSLPRITLANIRDNPGSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETG 419
           ++L +LR LPR++LAN++ NPGSK  ++R RG+  G K G G+KG  QR    RLG+E G
Sbjct: 11  RALDLLRGLPRVSLANLKPNPGSKKPERRPRGRRRGRKCGRGHKGERQRGTRPRLGFEGG 70

Query: 420 NNPFYLRIPHENYYRGHHLKREYPPMTLLELQKLIDRNRVDISKPIDIASLIKSGLYTLN 599
             PFY+RIP   +  GH  +R+Y P++L  LQ LID  RVD S+PID+  L+     T+ 
Sbjct: 71  QTPFYIRIPKYGFNEGHSFRRQYKPLSLNRLQYLIDLGRVDPSQPIDLTQLVNGRGVTIQ 130

Query: 600 PDQKHFGVNLTDDGADIFAAKINIEVQWASEQVIAAIEKNGGVITTAYYDPHSLFILKNP 779
           P ++ +GV L ++GAD F AK+NIEVQ ASE  IAAIEKNGGV+TTA+YDP SL I+  P
Sbjct: 131 PLKRDYGVQLVEEGADTFTAKVNIEVQLASELAIAAIEKNGGVVTTAFYDPRSLDIVCKP 190

Query: 780 QRFFETGSSYSKK 818
             FF  G    K+
Sbjct: 191 VPFFLRGQPIPKR 203


>CR533531-1|CAG38562.1|  296|Homo sapiens MRPL15 protein.
          Length = 296

 Score =  203 bits (495), Expect = 7e-52
 Identities = 98/193 (50%), Positives = 129/193 (66%)
 Frame = +3

Query: 240 KSLSMLRSLPRITLANIRDNPGSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETG 419
           ++L +LR LPR++LAN++ NPGSK  ++R RG+  G K G G+KG  QR    RLG+E G
Sbjct: 11  RALDLLRGLPRVSLANLKPNPGSKKPERRPRGRRRGRKCGRGHKGERQRGTRPRLGFEGG 70

Query: 420 NNPFYLRIPHENYYRGHHLKREYPPMTLLELQKLIDRNRVDISKPIDIASLIKSGLYTLN 599
             PFY+RIP   +  GH  +R+Y PM+L  LQ LID  RVD S+PID+  L+     T+ 
Sbjct: 71  QTPFYIRIPKYGFNEGHSFRRQYKPMSLNRLQYLIDLGRVDPSQPIDLTQLVNGRGVTIQ 130

Query: 600 PDQKHFGVNLTDDGADIFAAKINIEVQWASEQVIAAIEKNGGVITTAYYDPHSLFILKNP 779
           P ++ + V L ++GAD F AK+NIEVQ ASE  IAAIEKNGGV+TTA+YDP SL I+  P
Sbjct: 131 PLKRDYDVQLVEEGADTFTAKVNIEVQLASELAIAAIEKNGGVVTTAFYDPRSLDIVCKP 190

Query: 780 QRFFETGSSYSKK 818
             FF  G    K+
Sbjct: 191 VPFFLRGQPIPKR 203


>U30246-1|AAC50561.1| 1212|Homo sapiens bumetanide-sensitive Na-K-Cl
           cotransporter protein.
          Length = 1212

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 342 GGDKHGAGNKGSGQRQNYMRLGYETGNNPFYLR 440
           G   H  G  GSG  Q+Y    Y+T  N +YLR
Sbjct: 182 GSSLHSGGGGGSGHHQHYY---YDTHTNTYYLR 211


>BC033003-1|AAH33003.1| 1150|Homo sapiens SLC12A2 protein protein.
          Length = 1150

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 342 GGDKHGAGNKGSGQRQNYMRLGYETGNNPFYLR 440
           G   H  G  GSG  Q+Y    Y+T  N +YLR
Sbjct: 182 GSSLHSGGGGGSGHHQHYY---YDTHTNTYYLR 211


>AY280459-1|AAP33906.1| 1212|Homo sapiens bumetanide-sensitive
           Na-K-Cl cotransporter protein.
          Length = 1212

 Score = 30.3 bits (65), Expect = 8.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 342 GGDKHGAGNKGSGQRQNYMRLGYETGNNPFYLR 440
           G   H  G  GSG  Q+Y    Y+T  N +YLR
Sbjct: 182 GSSLHSGGGGGSGHHQHYY---YDTHTNTYYLR 211


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,539,058
Number of Sequences: 237096
Number of extensions: 2108596
Number of successful extensions: 4336
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4328
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)