Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_A13
(822 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087232-7|AAK09082.1| 298|Caenorhabditis elegans Hypothetical ... 124 8e-29
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 33 0.33
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.33
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 33 0.33
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p... 32 0.43
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr... 32 0.43
Z19154-5|CAA79557.1| 162|Caenorhabditis elegans Hypothetical pr... 29 4.0
U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule abnor... 29 4.0
U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule abnor... 29 4.0
AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein. 29 4.0
Z68118-6|CAA92187.1| 311|Caenorhabditis elegans Hypothetical pr... 29 5.3
AC025724-6|AAG23373.2| 158|Caenorhabditis elegans Hypothetical ... 29 5.3
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 7.0
AC006791-4|AAM97974.1| 603|Caenorhabditis elegans Metabotropic ... 28 7.0
AC006791-3|ABM01864.1| 906|Caenorhabditis elegans Metabotropic ... 28 7.0
AC006791-2|AAM97973.1| 1042|Caenorhabditis elegans Metabotropic ... 28 7.0
AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic ... 28 7.0
Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical p... 28 9.3
Z81097-11|CAB03170.2| 485|Caenorhabditis elegans Hypothetical p... 28 9.3
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 28 9.3
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 28 9.3
>AC087232-7|AAK09082.1| 298|Caenorhabditis elegans Hypothetical
protein Y92H12BR.8 protein.
Length = 298
Score = 124 bits (299), Expect = 8e-29
Identities = 70/202 (34%), Positives = 116/202 (57%), Gaps = 3/202 (1%)
Frame = +3
Query: 222 SRQITEKSLSMLRSLPRITLANIRDNPGSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMR 401
+R E++L ++ RI + + RDN G++ T ++ + H H +G+ +R
Sbjct: 5 ARSAKERALQIVEQASRIRIQDARDNIGARTTGRQLKKGHNQMGH---TQGALERAAKPP 61
Query: 402 LGYETGN--NPFYLRIPHENYYRGH-HLKREYPPMTLLELQKLIDRNRVDISKPIDIASL 572
LG+ G+ P+ P E + + +REY P++L+EL +LID ++ +PIDI++L
Sbjct: 62 LGWIWGDFFRPWQRMYPGEKLFNADINTRREYIPLSLVELARLIDLGWINPRQPIDISTL 121
Query: 573 IKSGLYTLNPDQKHFGVNLTDDGADIFAAKINIEVQWASEQVIAAIEKNGGVITTAYYDP 752
+ + +NP + +G +LT++GAD F I+IEVQ+A+ IAA+EK GG + TAYYD
Sbjct: 122 CTTQKFQINPKMRQYGFDLTEEGADSFPYSIDIEVQYATPSAIAAVEKAGGRVRTAYYDV 181
Query: 753 HSLFILKNPQRFFETGSSYSKK 818
SL NP+ +FE G K+
Sbjct: 182 ESLEAAINPKCWFEAGKVVPKR 203
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 288 IRDNPGSKITQKRGRGQHGGDKHGAGNKGSGQR 386
+RD G I + R QHG D G GSG R
Sbjct: 116 LRDQEGKYIPDRFNRAQHGADSKREGGSGSGNR 148
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 288 IRDNPGSKITQKRGRGQHGGDKHGAGNKGSGQR 386
+RD G I + R QHG D G GSG R
Sbjct: 116 LRDQEGKYIPDRFNRAQHGADSKREGGSGSGNR 148
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 288 IRDNPGSKITQKRGRGQHGGDKHGAGNKGSGQR 386
+RD G I + R QHG D G GSG R
Sbjct: 93 LRDQEGKYIPDRFNRAQHGADSKREGGSGSGNR 125
>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 32.3 bits (70), Expect = 0.43
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 291 RDNPGSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNNPFYLRIPHENYY-RG 467
++ PG+ ++ GRG HGG + GN+ S N E+G + H N Y RG
Sbjct: 212 QNGPGTSSSRGSGRGNHGGGRRNYGNQRSLHTNN-----NESGQHSQNGHSGHRNVYSRG 266
Query: 468 HHLKREY 488
++ +Y
Sbjct: 267 NYRGNKY 273
>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical
protein C34F6.10 protein.
Length = 1441
Score = 32.3 bits (70), Expect = 0.43
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 291 RDNPGSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNNPFYLRIPHENYY-RG 467
++ PG+ ++ GRG HGG + GN+ S N E+G + H N Y RG
Sbjct: 212 QNGPGTSSSRGSGRGNHGGGRRNYGNQRSLHTNN-----NESGQHSQNGHSGHRNVYSRG 266
Query: 468 HHLKREY 488
++ +Y
Sbjct: 267 NYRGNKY 273
>Z19154-5|CAA79557.1| 162|Caenorhabditis elegans Hypothetical
protein C40H1.6 protein.
Length = 162
Score = 29.1 bits (62), Expect = 4.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -1
Query: 423 CFQFHNLVSYNFDVVQNLYCLHHVCHPRV 337
C+ FHN+V Y FDV ++ + V P +
Sbjct: 68 CWYFHNMVKYEFDVEFDIPITYPVTAPEI 96
>U52003-5|AAG00057.1| 730|Caenorhabditis elegans P granule
abnormality protein 1,isoform a protein.
Length = 730
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 327 GRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNNPF 431
GRG +GGD+ G G G G R G + G +
Sbjct: 687 GRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGGY 721
>U52003-4|ABB51171.1| 771|Caenorhabditis elegans P granule
abnormality protein 1,isoform b protein.
Length = 771
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 327 GRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNNPF 431
GRG +GGD+ G G G G R G + G +
Sbjct: 728 GRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGGY 762
>AF077868-1|AAC36100.1| 730|Caenorhabditis elegans PGL-1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 327 GRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNNPF 431
GRG +GGD+ G G G G R G + G +
Sbjct: 687 GRGGYGGDRGGRGGYGGGDRGGRGGYGGDRGRGGY 721
>Z68118-6|CAA92187.1| 311|Caenorhabditis elegans Hypothetical
protein R01E6.6 protein.
Length = 311
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 726 VITTAYYDPHSLFILKNPQRFFETGSSYSK 815
+IT + +PHS F K QR FE Y K
Sbjct: 103 IITQCFENPHSEFANKVVQRIFEKREDYQK 132
>AC025724-6|AAG23373.2| 158|Caenorhabditis elegans Hypothetical
protein Y67D8C.7 protein.
Length = 158
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 267 PRITLANIRDNPGSKITQKRGRGQHGGDKHGAGNKGS 377
P++ + G + K G GQ GG+K+G G GS
Sbjct: 76 PKMRVRRGYSQGGGQKKSKYGGGQSGGNKYGGGGGGS 112
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 294 DNPGSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNN 425
DN G + GRG +GG +G G G+G + + G +N
Sbjct: 130 DNGGGRGGNGGGRGGNGGGNNGGGRGGNGGGRPQISAGERITHN 173
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = +3
Query: 303 GSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNNPFYLR--IPHENYYRGHHL 476
GS+ GR HGG H G + G ++ R G G + R PH G H
Sbjct: 311 GSRSGSPGGRHGHGGSGHHRGGRHGGHGRHGSRSGSPGGRHGHGGRHGPPHCPGRHGRHG 370
Query: 477 KREYPP 494
R + P
Sbjct: 371 SRSHSP 376
>AC006791-4|AAM97974.1| 603|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform b protein.
Length = 603
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 411 ETGNNPFYLRIPHENYYRGHHLKREYPPMTLLELQ-KLIDRNRVDISKPIDIASLIKSGL 587
+ G PF+ ++ +RG L+R Y M+L++ + LID N I + D+ L +G+
Sbjct: 452 DCGKIPFHKCTLAQSGFRGERLQRYYRNMSLIKNEPALIDANGDGIGR-YDVFQLDINGV 510
Query: 588 Y 590
Y
Sbjct: 511 Y 511
>AC006791-3|ABM01864.1| 906|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform c protein.
Length = 906
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 411 ETGNNPFYLRIPHENYYRGHHLKREYPPMTLLELQ-KLIDRNRVDISKPIDIASLIKSGL 587
+ G PF+ ++ +RG L+R Y M+L++ + LID N I + D+ L +G+
Sbjct: 452 DCGKIPFHKCTLAQSGFRGERLQRYYRNMSLIKNEPALIDANGDGIGR-YDVFQLDINGV 510
Query: 588 Y 590
Y
Sbjct: 511 Y 511
>AC006791-2|AAM97973.1| 1042|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform a protein.
Length = 1042
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 411 ETGNNPFYLRIPHENYYRGHHLKREYPPMTLLELQ-KLIDRNRVDISKPIDIASLIKSGL 587
+ G PF+ ++ +RG L+R Y M+L++ + LID N I + D+ L +G+
Sbjct: 452 DCGKIPFHKCTLAQSGFRGERLQRYYRNMSLIKNEPALIDANGDGIGR-YDVFQLDINGV 510
Query: 588 Y 590
Y
Sbjct: 511 Y 511
>AC006791-1|ABM01865.2| 1044|Caenorhabditis elegans Metabotropic
glutamate receptorfamily protein 3, isoform d protein.
Length = 1044
Score = 28.3 bits (60), Expect = 7.0
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 411 ETGNNPFYLRIPHENYYRGHHLKREYPPMTLLELQ-KLIDRNRVDISKPIDIASLIKSGL 587
+ G PF+ ++ +RG L+R Y M+L++ + LID N I + D+ L +G+
Sbjct: 452 DCGKIPFHKCTLAQSGFRGERLQRYYRNMSLIKNEPALIDANGDGIGR-YDVFQLDINGV 510
Query: 588 Y 590
Y
Sbjct: 511 Y 511
>Z81097-12|CAD56590.1| 457|Caenorhabditis elegans Hypothetical
protein K07A1.9b protein.
Length = 457
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -3
Query: 652 KMSAPSSVKLTPKCFWSGFNVYNPDFIKLAISMGLDM----STRFLSINFCNSKSVIGGY 485
K+ A V + PKCF + + YNP++ L++ + T+ L + N K GY
Sbjct: 280 KLIAVCVVDILPKCFSAKYMYYNPEYSFLSLGTYTALREIEQTQRLHAIYSNLKYYYMGY 339
Query: 484 SLFKWCP 464
+ CP
Sbjct: 340 YIHS-CP 345
>Z81097-11|CAB03170.2| 485|Caenorhabditis elegans Hypothetical
protein K07A1.9a protein.
Length = 485
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = -3
Query: 652 KMSAPSSVKLTPKCFWSGFNVYNPDFIKLAISMGLDM----STRFLSINFCNSKSVIGGY 485
K+ A V + PKCF + + YNP++ L++ + T+ L + N K GY
Sbjct: 308 KLIAVCVVDILPKCFSAKYMYYNPEYSFLSLGTYTALREIEQTQRLHAIYSNLKYYYMGY 367
Query: 484 SLFKWCP 464
+ CP
Sbjct: 368 YIHS-CP 373
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 303 GSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNN 425
G+ + RG G GGD+ G+ N G NY G E NN
Sbjct: 304 GNSYGRNRGGGNEGGDQWGSNNNGG---DNY---GSELSNN 338
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 303 GSKITQKRGRGQHGGDKHGAGNKGSGQRQNYMRLGYETGNN 425
G+ + RG G GGD+ G+ N G NY G E NN
Sbjct: 304 GNSYGRNRGGGNEGGDQWGSNNNGG---DNY---GSELSNN 338
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,874,279
Number of Sequences: 27780
Number of extensions: 353335
Number of successful extensions: 1058
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1049
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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