Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_A11
(896 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 55 1e-08
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 52 8e-08
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 51 3e-07
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 39 8e-04
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 37 0.003
SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual 31 0.29
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 29 0.68
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 28 1.6
SPBC20F10.10 |||cyclin pho85 family|Schizosaccharomyces pombe|ch... 28 2.1
SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.7
SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 4.8
SPAC16A10.05c |dad1||DASH complex subunit Dad1|Schizosaccharomyc... 26 6.3
SPAC3C7.06c |pit1||serine/threonine protein kinase Pit1|Schizosa... 26 8.4
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 55.2 bits (127), Expect = 1e-08
Identities = 30/70 (42%), Positives = 40/70 (57%)
Frame = +1
Query: 436 TTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTD 615
T V A+ GYR IDTA+IYGNEK IG+ I+ + V R ++++ KLW HR
Sbjct: 38 TKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR----ESGVPRTDIWVTSKLWCNAHRAG 93
Query: 616 LVETACRISL 645
LV A +L
Sbjct: 94 LVPLALEKTL 103
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 52.4 bits (120), Expect = 8e-08
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +1
Query: 445 IVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKL 591
+V A+D GYR IDTA +YGNE + GKAI + + V+R ++F+ KL
Sbjct: 37 LVTQALDSGYRHIDTAAVYGNEDICGKAIVDWCEKNNVKRTDIFLTSKL 85
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 50.8 bits (116), Expect = 3e-07
Identities = 28/70 (40%), Positives = 38/70 (54%)
Frame = +1
Query: 436 TTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTD 615
T V+TA+ GYR ID A IYGNE +G IK + G R+D +++ KLW H +
Sbjct: 39 TKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK---ESGVPRKD-IWVTSKLWCNAHAPE 94
Query: 616 LVETACRISL 645
V A +L
Sbjct: 95 AVPKALEKTL 104
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 39.1 bits (87), Expect = 8e-04
Identities = 25/70 (35%), Positives = 37/70 (52%)
Frame = +1
Query: 448 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVET 627
V+ A+ G+ ID A +YGNE+ +G A+K + V R +LFI K+ H D +
Sbjct: 37 VKNALAAGFIHIDCAEVYGNEEEVGVALK----EANVPRSKLFITSKV---MHNVDNIPE 89
Query: 628 ACRISLXRPG 657
A SL + G
Sbjct: 90 ALNESLRKLG 99
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 37.1 bits (82), Expect = 0.003
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +1
Query: 448 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKL 591
V A+ GYR ID+A +Y NE G+AI +++ +R++++ KL
Sbjct: 33 VYAALQCGYRHIDSAQMYHNEADCGRAILKFMEETGTKREDIWFTSKL 80
>SPBC13E7.05 |gpi14||pig-M|Schizosaccharomyces pombe|chr 2|||Manual
Length = 815
Score = 30.7 bits (66), Expect = 0.29
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = -2
Query: 334 LASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQIIF 161
++SFS+ + +LY + +S VS +PL + L G S+LT +I++ K+ Q ++
Sbjct: 49 ISSFSTHLNILYFNLSKSMVSFAQVPL-EEYLNLLGHSLLTSIIYVMLKRRFYEQSVY 105
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 29.5 bits (63), Expect = 0.68
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +1
Query: 436 TTEIVETAIDMGYRAIDTAYIYGN---EKLIGKAIK 534
T ++ A D+G DTA IY N E ++GKAIK
Sbjct: 46 TKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIK 81
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 2386
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -2
Query: 391 MNVPSRSFKVAT-SFTLPFSLASFSSAILVLYCSSVRSPVSRFCL 260
MN+ F + T ++TLPF + + + A++V +S V+ CL
Sbjct: 726 MNISEGDFLIRTQAYTLPFLVLTKNKALIVRIAELSQSDVATLCL 770
>SPBC20F10.10 |||cyclin pho85 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 243
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/63 (25%), Positives = 29/63 (46%)
Frame = -2
Query: 346 LPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTEVIFLNTKKHNMNQI 167
+P S S + L+ +V S + L + CP D L+ +I+L+ H+ +
Sbjct: 58 IPLSPTSLKNPCLIFSAKNVPSISIQAYLTRILKYCPATNDVFLSVLIYLDRIVHHFHFT 117
Query: 166 IFI 158
+FI
Sbjct: 118 VFI 120
>SPBP22H7.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 255
Score = 27.5 bits (58), Expect = 2.7
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = -2
Query: 385 VPSRSFKVATSFTLPFSLASFSSAILV 305
+PS+ F++ T F PF+ FS +++V
Sbjct: 177 LPSQRFEIVTGFLSPFNKLYFSKSLIV 203
>SPCC1393.05 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 956
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 427 HGLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKID 546
H +TE+ + +I G RA+D N + I NK++
Sbjct: 376 HSSSTELSDNSIHQGRRAVDPVVNQNNPSNFEEMIMNKLN 415
>SPAC16A10.05c |dad1||DASH complex subunit Dad1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 85
Score = 26.2 bits (55), Expect = 6.3
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = -2
Query: 151 DFTKDFQNKN*KNIQNLRFSKTRRLLSTTARRVKGQIL 38
D T++ QN+ K+ ++ F + RRLL+ + +++
Sbjct: 2 DITENIQNEQNKDFDDIDFERRRRLLTLQISKSMNEVV 39
>SPAC3C7.06c |pit1||serine/threonine protein kinase
Pit1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 650
Score = 25.8 bits (54), Expect = 8.4
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -2
Query: 352 FTLPFSLASFSSAILVLYCSSVRSPVSRFCLPLSKRRCPLPGDSILTE 209
F+ P++LA S +L + P + CL L R P D++ ++
Sbjct: 301 FSPPWNLAFASMLSQLLKWDPAKRPTAEMCLDLEFCRVSAPADAVASK 348
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,382,825
Number of Sequences: 5004
Number of extensions: 67055
Number of successful extensions: 228
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 218
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 227
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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