Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_A11
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical ... 70 2e-12
AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical ... 70 2e-12
U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical pr... 63 3e-10
U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 52 4e-07
U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical pr... 52 6e-07
AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical ... 52 6e-07
Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical pr... 39 0.004
U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical pr... 39 0.004
U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory... 31 1.1
Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical pr... 29 4.5
>AL110482-2|CAB60335.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1b protein.
Length = 316
Score = 70.1 bits (164), Expect = 2e-12
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +1
Query: 430 GLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFH 606
G ++TA+ GYR ID A++Y N+K +G+A+K +D+G V+R+ELFI K+W+TFH
Sbjct: 26 GEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGKVKREELFITSKVWNTFH 84
>AL110482-1|CAB54385.1| 316|Caenorhabditis elegans Hypothetical
protein Y39G8B.1a protein.
Length = 316
Score = 70.1 bits (164), Expect = 2e-12
Identities = 28/59 (47%), Positives = 43/59 (72%)
Frame = +1
Query: 430 GLTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFH 606
G ++TA+ GYR ID A++Y N+K +G+A+K +D+G V+R+ELFI K+W+TFH
Sbjct: 26 GEVAAAIKTAVAAGYRHIDCAHVYQNQKEVGEALKEILDEGKVKREELFITSKVWNTFH 84
>U80844-1|AAB37976.1| 317|Caenorhabditis elegans Hypothetical
protein C07D8.6 protein.
Length = 317
Score = 62.9 bits (146), Expect = 3e-10
Identities = 31/68 (45%), Positives = 43/68 (63%)
Frame = +1
Query: 448 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVET 627
V+TA+ GYR IDTA +Y NE+ IG AIK +++G V+R+ELFI K W+ +E
Sbjct: 35 VKTAVKAGYRLIDTASVYQNEEAIGTAIKELLEEGVVKREELFITTKAWTHELAPGKLEG 94
Query: 628 ACRISLXR 651
R SL +
Sbjct: 95 GLRESLKK 102
>U55368-5|AAA97992.2| 333|Caenorhabditis elegans Hypothetical
protein T08H10.1 protein.
Length = 333
Score = 56.4 bits (130), Expect = 3e-08
Identities = 24/56 (42%), Positives = 36/56 (64%)
Frame = +1
Query: 439 TEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFH 606
T + A+D GYR IDTA++Y NE +IGK + I G ++R+++F+ KL T H
Sbjct: 31 TVALRAALDAGYRLIDTAHLYQNEHIIGKVLHEYISSGKLKREDIFVTSKLPFTAH 86
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 52.4 bits (120), Expect = 4e-07
Identities = 27/69 (39%), Positives = 40/69 (57%)
Frame = +1
Query: 445 IVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVE 624
++ A+ GYR IDTA +Y NE IG A+ +G ++R+++FI K + D+VE
Sbjct: 34 VIRNAVLAGYRHIDTATLYQNEHQIGDALAELFAEGILKREDIFITTKAFCHEVAPDVVE 93
Query: 625 TACRISLXR 651
A R SL R
Sbjct: 94 EALRNSLKR 102
>U80844-2|AAB37972.1| 134|Caenorhabditis elegans Hypothetical
protein C07D8.5 protein.
Length = 134
Score = 52.0 bits (119), Expect = 6e-07
Identities = 27/58 (46%), Positives = 36/58 (62%)
Frame = +1
Query: 448 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLV 621
V+ A+ GY IDTA Y NE+ IG AIK I +G V+R++LFI K+ + F LV
Sbjct: 75 VKAAVKNGYSLIDTASGYNNEEFIGTAIKEVIAEGVVKREDLFITTKVPNLFSSLRLV 132
>AL110482-3|CAB60336.1| 339|Caenorhabditis elegans Hypothetical
protein Y39G8B.2 protein.
Length = 339
Score = 52.0 bits (119), Expect = 6e-07
Identities = 23/58 (39%), Positives = 36/58 (62%)
Frame = +1
Query: 433 LTTEIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFH 606
L E V A++ GYR ID+A + N++ + IK+ VRR+ELF+ K+W+T+H
Sbjct: 29 LAAERVRDALEAGYRHIDSALSFKNQEEVAAGIKDWCKIRKVRREELFLSSKIWNTYH 86
>Z81088-3|CAB03128.1| 283|Caenorhabditis elegans Hypothetical
protein F53F1.3 protein.
Length = 283
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/49 (36%), Positives = 32/49 (65%)
Frame = +1
Query: 445 IVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKL 591
+++ A+ GYR DTA +Y NEK IG A++ + ++R+++FI K+
Sbjct: 29 VLDAALTAGYRLFDTAKVYNNEKEIGDALEILLPKHNLKREDIFITTKM 77
>U21324-6|AAA62562.1| 287|Caenorhabditis elegans Hypothetical
protein C35D10.6 protein.
Length = 287
Score = 42.3 bits (95), Expect = 5e-04
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = +1
Query: 442 EIVETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKL 591
++++ GYR IDTA +Y NE IG+ ++ + ++R++++I KL
Sbjct: 29 QVIDAGFKEGYRFIDTAQVYNNEAKIGRILEKLLPANGLKREDIWITSKL 78
>Z71181-2|CAA94895.1| 301|Caenorhabditis elegans Hypothetical
protein K07C5.2 protein.
Length = 301
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/60 (33%), Positives = 34/60 (56%)
Frame = +1
Query: 448 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVET 627
+E A+ GYR DTA +Y NE +G ++K + + R+++FI K+ T + + ET
Sbjct: 40 IEAALKSGYRQFDTANLYKNETFLGNSLKKYLPQFGLTREDVFITTKV-RTLNENTVEET 98
>U21308-3|AAB93322.2| 321|Caenorhabditis elegans Hypothetical
protein ZK1290.5 protein.
Length = 321
Score = 41.9 bits (94), Expect = 6e-04
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +1
Query: 469 GYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLW 594
GYR IDTA YG EK +G A+KN +V R+E+F+ KLW
Sbjct: 39 GYRLIDTAKRYGVEKQLGIAVKN----CSVPREEMFLSTKLW 76
>Z81088-2|CAB03127.1| 297|Caenorhabditis elegans Hypothetical
protein F53F1.2 protein.
Length = 297
Score = 39.1 bits (87), Expect = 0.004
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 448 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLWSTFHRTDLVET 627
++ A+ GYR DTA Y NEK +G+A+K + + R ++F+ K F +
Sbjct: 40 IDAALTAGYRMFDTAKYYLNEKELGEALKILLPKHGLSRSDVFLTSKF---FPESKNCRE 96
Query: 628 ACR 636
ACR
Sbjct: 97 ACR 99
>U50068-4|AAB37733.1| 287|Caenorhabditis elegans Hypothetical
protein C01G5.5 protein.
Length = 287
Score = 39.1 bits (87), Expect = 0.004
Identities = 16/49 (32%), Positives = 31/49 (63%)
Frame = +1
Query: 448 VETAIDMGYRAIDTAYIYGNEKLIGKAIKNKIDDGTVRRDELFIMGKLW 594
V+ A+ +GYR+ DTA Y NEK +G A+K + + +++++ K++
Sbjct: 29 VDEALKVGYRSFDTAKYYENEKDLGLALKTLLPRHNICSEDIYLTSKVF 77
>U00033-13|AAC48300.1| 439|Caenorhabditis elegans Mechanosensory
abnormality protein14 protein.
Length = 439
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Frame = +1
Query: 442 EIVETAIDMGYRAIDTAYIYG---NEKLIGKAI 531
+IVETAI G IDT Y Y +E ++GKA+
Sbjct: 118 KIVETAIKQGINYIDTGYWYSQSRSESILGKAL 150
>Z72517-3|CAA96695.1| 717|Caenorhabditis elegans Hypothetical
protein T28F4.4 protein.
Length = 717
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -3
Query: 612 GAMECTPQFTHNEKLVSPHGAVVNLVLDRFSYELFVAVNISGIYSSVAHINSSLHYFR 439
G QFT + + GA+ +VL + L +S +++++AH+ SS FR
Sbjct: 422 GDAHINSQFTKEDFVHRTKGAIAKIVLVKERIRLAKVPALSELFNALAHVMSSPENFR 479
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,883,398
Number of Sequences: 27780
Number of extensions: 381912
Number of successful extensions: 1159
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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