Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_A10
(927 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.043
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.075
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.30
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 1.6
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 28 2.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 2.1
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 6.6
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 6.6
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 26 8.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.5 bits (73), Expect = 0.043
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +3
Query: 804 KTPPXPPPXX-TPXQYPXPXXXFXPPGXXXXXXPPPPPXG 920
K+PP PPP P P P P PPPPP G
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPG 769
Score = 32.7 bits (71), Expect = 0.075
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -3
Query: 550 PPXPRGGXPGXXPPXPPPXPP 488
PP P G G PP PPP PP
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPP 783
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2
Query: 575 PXPXXXXXPPPAPXGGPGXXPPXPPP 498
P P PPPAP G G PP PPP
Sbjct: 744 PAPAPIPVPPPAPIMG-GPPPPPPPP 768
Score = 29.9 bits (64), Expect = 0.53
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = -2
Query: 575 PXPXXXXXPPPAPXGG-PGXXPPXPPP 498
P P PPP P G G PP PPP
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 29.9 bits (64), Expect = 0.53
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 555 PPPPXPXGGXRXXXPXXPPPXP 490
PPPP P G P PPP P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -2
Query: 605 PXXPRGGGXXPXPXXXXXPPPAPXG-GPGXXPPXPP 501
P P GG P P PPP G GP PP PP
Sbjct: 753 PPAPIMGGPPPPP-----PPPGVAGAGPPPPPPPPP 783
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 561 PXPPPPXPXGGXRXXXPXXPPP 496
P PPPP G P PPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.6
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 8/54 (14%)
Frame = +3
Query: 777 KXXPXGXPXKTPPXPPPXXTPXQYPXPXXXFXPP--------GXXXXXXPPPPP 914
K P P P P P P P P PP G PPPPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 836 PXPIPXTXXXXXPPGXXXGXXPPPPP 913
P PI PP G PPPPP
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 25.8 bits (54), Expect = 8.7
Identities = 15/50 (30%), Positives = 15/50 (30%), Gaps = 1/50 (2%)
Frame = +3
Query: 681 PPXXGXFXXPPPPGGX*KXPPX-FXGGKXPXEXKXXPXGXPXKTPPXPPP 827
PP P P PP GG P G PP PPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.7 bits (71), Expect = 0.075
Identities = 21/50 (42%), Positives = 21/50 (42%)
Frame = -1
Query: 909 GGGGXXPXFXPGGXXXXXVXGIGXGSXXGGXGGGFXGGXPGGXFXFXXGF 760
GGG P PGG G G G GG GG GG PGG GF
Sbjct: 194 GGGSGGPPPGPGGFGGFGGFG-GEGHHHGGHGG--FGGGPGGFEGGPGGF 240
Score = 29.5 bits (63), Expect = 0.70
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = -1
Query: 912 GGGGGXXPXFXPG-GXXXXXVXGIGXGSXXGGXGGGFXGGXPGG 784
GG GG F G G G G G G G G GG PGG
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = -3
Query: 910 GGGGXXXXXXPGGXXXXXGXGYWXGVXXGGGXGGVFXGXPXG 785
GGG PGG G G+ G+ GG G F G P G
Sbjct: 227 GGGPGGFEGGPGGFGGGPG-GFGGGLGGFGGGPGGFGGGPGG 267
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3
Query: 489 GGXGGGXGGXXPGXPPRGXGG 551
GG GGG GG PG P G GG
Sbjct: 191 GGFGGGSGGPPPG--PGGFGG 209
Score = 27.1 bits (57), Expect = 3.8
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 499 GGGXGGXXPGPPXGAGGGXXXXXGXGXXPPPRGXXG 606
GGG GG PGP G GG G G G G
Sbjct: 194 GGGSGGPPPGP--GGFGGFGGFGGEGHHHGGHGGFG 227
Score = 27.1 bits (57), Expect = 3.8
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = +1
Query: 499 GGGXGGXXPGPPXGAGGGXXXXXG--XGXXPPPRGXXGXPKTPANP 630
GGG GG G P G GGG G G P G G P P
Sbjct: 227 GGGPGG-FEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +1
Query: 499 GGGXGGXXPGPPXGAGGGXXXXXGXG 576
GGG GG GP G GGG G G
Sbjct: 248 GGGLGGFGGGP-GGFGGGPGGHGGPG 272
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.30
Identities = 22/82 (26%), Positives = 22/82 (26%), Gaps = 4/82 (4%)
Frame = +3
Query: 681 PPXXGXFXXPPPPGGX*KXPPXFXGGKXPXEXKXX----PXGXPXKTPPXPPPXXTPXQY 848
PP PP P PP P K P P PP P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 849 PXPXXXFXPPGXXXXXXPPPPP 914
P P P PP PP
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPP 1193
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -2
Query: 605 PXXPRGGGXXPXPXXXXXPPPAPXGGPGXXPPXPPP 498
P P G P P PP P P PP P P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPV--PSGAPPVPKP 1145
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -2
Query: 605 PXXPRGGGXXPXPXXXXXPPPAPXGGPGXXPPXPPP 498
P P G P P PP P P PP P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVP--APSGAPPVPKP 1164
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = -2
Query: 605 PXXPRGGGXXPXPXXXXXPPPAPXGGPGXXPPXPPP 498
P P G P P PP P G PP P P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSG-IPPVPKP 1184
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -2
Query: 611 GXPXXPRGGGXXPXPXXXXXPPPAPXGGPGXXPPXPPP 498
G P P+ P PP P G PP PPP
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVG-VPPVPPP 1213
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = -2
Query: 611 GXPXXPRGGGXXPXPXXXXXPPPAPXGGPGXXPPXPPP 498
G P P G P P PP P PP P P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVA-VPPVPAP 1117
Score = 26.2 bits (55), Expect = 6.6
Identities = 24/86 (27%), Positives = 24/86 (27%)
Frame = +3
Query: 654 PXXAXNQKXPPXXGXFXXPPPPGGX*KXPPXFXGGKXPXEXKXXPXGXPXKTPPXPPPXX 833
P A P G P P G PP P E P PP PPP
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPP-------PSEAPPVPK-PSVGVPPVPPPST 1215
Query: 834 TPXQYPXPXXXFXPPGXXXXXXPPPP 911
P P P P PP P
Sbjct: 1216 AP-PVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 25.8 bits (54), Expect = 8.7
Identities = 23/86 (26%), Positives = 24/86 (27%)
Frame = +3
Query: 654 PXXAXNQKXPPXXGXFXXPPPPGGX*KXPPXFXGGKXPXEXKXXPXGXPXKTPPXPPPXX 833
P + K PP PP PP P K G P PP P P
Sbjct: 1013 PVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSS-GAPSAPPPVPAPSS 1071
Query: 834 TPXQYPXPXXXFXPPGXXXXXXPPPP 911
P P PP PP P
Sbjct: 1072 EIPSIPAPSG--APPVPAPSGIPPVP 1095
Score = 25.8 bits (54), Expect = 8.7
Identities = 20/80 (25%), Positives = 20/80 (25%)
Frame = +3
Query: 681 PPXXGXFXXPPPPGGX*KXPPXFXGGKXPXEXKXXPXGXPXKTPPXPPPXXTPXQYPXPX 860
PP PP P PP P P PP P P P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPV-----PKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPS 1137
Query: 861 XXFXPPGXXXXXXPPPPPXG 920
P P P P G
Sbjct: 1138 GAPPVPKPSVAAPPVPAPSG 1157
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = -2
Query: 611 GXPXXPRGG-GXXPXPXXXXXPPPAPXGGPGXXPPXPPP 498
G P P+ P P PP P G PP PPP
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG-VPPVPPP 1194
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -2
Query: 569 PXXXXXPPPAPXGGPGXXPPXPPP 498
P PPP P P PP PPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 555 PPPPXPXGGXRXXXPXXPPPXP 490
PPPP P G PPP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +3
Query: 786 PXGXPXKTPPXPPPXXTPXQYPXPXXXFXPPG 881
P G P PP PPP P P P PPG
Sbjct: 5 PPGNPP--PPPPPPGFEPPSQPPPP---PPPG 31
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -1
Query: 561 PXPPPPXPXGGXRXXXPXXPPP 496
P PPPP P P PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 843 GXGSXXGGXGGGFXGGXPGGXFXF 772
G GG GGG G PGG F F
Sbjct: 75 GLNGQPGGPGGGPGEGFPGGGFGF 98
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -1
Query: 912 GGGGGXXPXFXPGGXXXXXVXGIGXGSXXGGXGGGFXGGXPGG 784
GG G GG G G GS G GGF GG GG
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSR-GGFRGGSRGG 189
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +3
Query: 798 PXKTPPXPPPXXTPXQYPXPXXXFXPPGXXXXXXPPPPPXG 920
P TPP P P Q P P PP P G
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAG 1726
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = -2
Query: 575 PXPXXXXXPPPAPXGGPGXXPPXPPP 498
P P PPP+ P P PPP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 6.6
Identities = 22/91 (24%), Positives = 26/91 (28%), Gaps = 2/91 (2%)
Frame = +3
Query: 645 PXSPXXAXNQKXPPXXGXFXXPPPPGGX*KXPPXFXGGKXPXEXKXXPXGXPXKT--PPX 818
P + ++ PP PP PP G P P G +T PP
Sbjct: 365 PPRSAPSTGRQPPPLSSSRAVSNPPA----PPPAIPGRSAPA---LPPLGNASRTSTPPV 417
Query: 819 PPPXXTPXQYPXPXXXFXPPGXXXXXXPPPP 911
P P P P PP PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP 448
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 837 GSXXGGXGGGFXGGXPGG 784
G GG GG GG PGG
Sbjct: 612 GGAPGGAPGGMPGGAPGG 629
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,831,506
Number of Sequences: 5004
Number of extensions: 25149
Number of successful extensions: 228
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 469338710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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