Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_A08
(887 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 293 1e-79
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 287 5e-78
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 284 7e-77
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 283 9e-77
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 281 4e-76
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 281 4e-76
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 193 2e-49
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 193 2e-49
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 143 2e-34
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 138 4e-33
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 134 6e-32
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 134 6e-32
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 134 6e-32
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 134 1e-31
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 132 2e-31
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 132 3e-31
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 132 3e-31
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 132 3e-31
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 132 3e-31
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 132 3e-31
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 132 3e-31
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 130 1e-30
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 129 3e-30
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 129 3e-30
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 105 3e-23
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 105 3e-23
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 293 bits (718), Expect = 1e-79
Identities = 144/200 (72%), Positives = 155/200 (77%)
Frame = +1
Query: 178 DPTGVYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQL 357
DPTG Y G SDLQLERI+VYYNEAS GGKYVPRA L+DLEPGTMD+VR+G +GQL
Sbjct: 31 DPTGAYNGDSDLQLERINVYYNEAS------GGKYVPRACLVDLEPGTMDSVRAGPFGQL 84
Query: 358 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXX 537
FRPDNFVFGQSGAGNNWAKGHYTEGAELVD VLDVVRKE E+CDCLQGFQ
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGGGTG 144
Query: 538 XXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDN 717
KIREEYPDRIM T+SVVPSPKVSDTVVEPYNA LS+HQLVENTDET+CIDN
Sbjct: 145 SGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDN 204
Query: 718 EXPLRYLLQDSXGYRTPTYG 777
E L + + TPTYG
Sbjct: 205 E-ALYDICFRTLKLTTPTYG 223
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 287 bits (705), Expect = 5e-78
Identities = 140/199 (70%), Positives = 154/199 (77%)
Frame = +1
Query: 181 PTGVYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLF 360
P G Y+G SDLQLERI+VYYNEA+ GGKYVPRA+L+DLEPGTMD+VRSG +GQLF
Sbjct: 32 PDGTYKGESDLQLERINVYYNEAN------GGKYVPRAVLVDLEPGTMDSVRSGPFGQLF 85
Query: 361 RPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXX 540
RPDNFVFGQSGAGNNWAKGHYTEGAELVD VLDVVRKE E CDCLQGFQ
Sbjct: 86 RPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGGGTGS 145
Query: 541 XXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 720
KIREEYPDRIM+++SVVPSPKVSDTVVEPYNA LS+HQLVENTDET+CIDNE
Sbjct: 146 GMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNE 205
Query: 721 XPLRYLLQDSXGYRTPTYG 777
L + + PTYG
Sbjct: 206 -ALYDICFRTLKLSNPTYG 223
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 284 bits (696), Expect = 7e-77
Identities = 137/199 (68%), Positives = 152/199 (76%)
Frame = +1
Query: 181 PTGVYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLF 360
P G ++G +DLQLERI VYYNEA+ GKYVPRA+L+DLEPGTMD+VRSG +GQLF
Sbjct: 32 PDGTFKGETDLQLERIDVYYNEAN------NGKYVPRAVLVDLEPGTMDSVRSGPFGQLF 85
Query: 361 RPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXX 540
RPDNFVFGQSGAGNNWAKGHYTEGAELVD VLDV+RKE E CDCLQGFQ
Sbjct: 86 RPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGS 145
Query: 541 XXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 720
KIREEYPDRIM+++SVVPSPKVSDTVVEPYNA LS+HQLVENTDETYCIDNE
Sbjct: 146 GMGTLLISKIREEYPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNE 205
Query: 721 XPLRYLLQDSXGYRTPTYG 777
L + + PTYG
Sbjct: 206 -ALYDICYRTLKLTNPTYG 223
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 283 bits (695), Expect = 9e-77
Identities = 137/199 (68%), Positives = 152/199 (76%)
Frame = +1
Query: 181 PTGVYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLF 360
P G ++G SDLQLERI VYYNEA+ GKYVPRA+L+DLEPGTMD+VRSG +GQLF
Sbjct: 32 PDGTFKGESDLQLERIDVYYNEAN------NGKYVPRAVLVDLEPGTMDSVRSGPFGQLF 85
Query: 361 RPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXX 540
RPDNFVFGQSGAGNNWAKGHYTEGAELVD VLDV+RKE E CDCLQGFQ
Sbjct: 86 RPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGGTGS 145
Query: 541 XXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 720
KIREE+PDRIM+++SVVPSPKVSDTVVEPYNA LS+HQLVENTDETYCIDNE
Sbjct: 146 GMGTLLISKIREEFPDRIMSSFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNE 205
Query: 721 XPLRYLLQDSXGYRTPTYG 777
L + + PTYG
Sbjct: 206 -ALYDICYRTLKLTNPTYG 223
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 281 bits (690), Expect = 4e-76
Identities = 139/200 (69%), Positives = 152/200 (76%)
Frame = +1
Query: 178 DPTGVYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQL 357
DP+G Y G SDLQLERI+VYYNEA KYVPRA+L+DLEPGTMD+VRSG +GQL
Sbjct: 31 DPSGQYVGDSDLQLERINVYYNEAG------SNKYVPRAVLVDLEPGTMDSVRSGPFGQL 84
Query: 358 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXX 537
FRPDN+VFGQSGAGNNWAKGHYTEGAELVD VLDVVRKE E+ DCLQGFQ
Sbjct: 85 FRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTG 144
Query: 538 XXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDN 717
KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA LS+HQLVENTD T+CIDN
Sbjct: 145 SGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDN 204
Query: 718 EXPLRYLLQDSXGYRTPTYG 777
E L + + TPTYG
Sbjct: 205 E-ALYDICFRTLKLTTPTYG 223
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 281 bits (690), Expect = 4e-76
Identities = 139/200 (69%), Positives = 152/200 (76%)
Frame = +1
Query: 178 DPTGVYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQL 357
DP+G Y G SDLQLERI+VYYNEA KYVPRA+L+DLEPGTMD+VRSG +GQL
Sbjct: 31 DPSGQYVGDSDLQLERINVYYNEAG------SNKYVPRAVLVDLEPGTMDSVRSGPFGQL 84
Query: 358 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXX 537
FRPDN+VFGQSGAGNNWAKGHYTEGAELVD VLDVVRKE E+ DCLQGFQ
Sbjct: 85 FRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGGGTG 144
Query: 538 XXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDN 717
KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNA LS+HQLVENTD T+CIDN
Sbjct: 145 SGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDSTFCIDN 204
Query: 718 EXPLRYLLQDSXGYRTPTYG 777
E L + + TPTYG
Sbjct: 205 E-ALYDICFRTLKLTTPTYG 223
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 193 bits (470), Expect = 2e-49
Identities = 92/178 (51%), Positives = 122/178 (68%)
Frame = +1
Query: 187 GVYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRP 366
G Y+G + QLERI+ YY E G KYVPRAIL+DL+P +++ VRS YG+LF P
Sbjct: 34 GTYKGDNGSQLERITSYYKEME------GRKYVPRAILVDLDPESINYVRSTQYGKLFDP 87
Query: 367 DNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXX 546
+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+E E D L+GFQ
Sbjct: 88 ENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGL 147
Query: 547 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 720
K+REEY D+ ++T S++PS KVSDTVVEPYNA+LS+ L++N DE +CIDNE
Sbjct: 148 GSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNE 205
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 193 bits (470), Expect = 2e-49
Identities = 92/178 (51%), Positives = 122/178 (68%)
Frame = +1
Query: 187 GVYRGTSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRP 366
G Y+G + QLERI+ YY E G KYVPRAIL+DL+P +++ VRS YG+LF P
Sbjct: 34 GTYKGDNGSQLERITSYYKEME------GRKYVPRAILVDLDPESINYVRSTQYGKLFDP 87
Query: 367 DNFVFGQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXX 546
+N V G+SGAGNNW++G+Y +GAE+VD VL V+R+E E D L+GFQ
Sbjct: 88 ENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGGGTGSGL 147
Query: 547 XXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 720
K+REEY D+ ++T S++PS KVSDTVVEPYNA+LS+ L++N DE +CIDNE
Sbjct: 148 GSLLISKLREEYSDKTLSTCSIIPSAKVSDTVVEPYNAILSMPHLMDNCDENFCIDNE 205
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 143 bits (346), Expect = 2e-34
Identities = 65/149 (43%), Positives = 94/149 (63%)
Frame = +1
Query: 274 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAV 453
GK+VPRAI +DLEP +D +R+G YG LF PD + G+ A NN+A+GHYT G EL+D V
Sbjct: 62 GKHVPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVV 121
Query: 454 LDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS 633
LD +RK+ ENC+ LQGF ++ E+ + +SV P+P+VS
Sbjct: 122 LDRIRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVS 181
Query: 634 DTVVEPYNAVLSIHQLVENTDETYCIDNE 720
+VVEPYN++L+ H +E +D ++ +DNE
Sbjct: 182 TSVVEPYNSILTTHTTLELSDCSFMVDNE 210
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 138 bits (335), Expect = 4e-33
Identities = 64/167 (38%), Positives = 102/167 (61%)
Frame = +1
Query: 274 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAV 453
GK+VPRAI +DLEP +D VR+G Y +LF P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 59 GKHVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVV 118
Query: 454 LDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS 633
+D VR+ E C LQGF ++ +Y + +S+ P+P++S
Sbjct: 119 MDRVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQIS 178
Query: 634 DTVVEPYNAVLSIHQLVENTDETYCIDNEXPLRYLLQDSXGYRTPTY 774
++VEPYN++L+ H +E++D ++ +DNE + + + + G R+PTY
Sbjct: 179 TSMVEPYNSLLTTHTTLEHSDCSFIMDNE-AIYEITKVNLGVRSPTY 224
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 134 bits (325), Expect = 6e-32
Identities = 59/149 (39%), Positives = 91/149 (61%)
Frame = +1
Query: 274 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAV 453
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 454 LDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS 633
LD +R+ +NC LQGF ++ +Y + +S+ P+P+VS
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVS 176
Query: 634 DTVVEPYNAVLSIHQLVENTDETYCIDNE 720
VVEPYN++L+ H +E++D + +DNE
Sbjct: 177 TAVVEPYNSILTTHTTLEHSDCAFMVDNE 205
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 134 bits (325), Expect = 6e-32
Identities = 59/149 (39%), Positives = 91/149 (61%)
Frame = +1
Query: 274 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAV 453
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 454 LDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS 633
LD +R+ +NC LQGF ++ +Y + +S+ P+P+VS
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVS 176
Query: 634 DTVVEPYNAVLSIHQLVENTDETYCIDNE 720
VVEPYN++L+ H +E++D + +DNE
Sbjct: 177 TAVVEPYNSILTTHTTLEHSDCAFMVDNE 205
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 134 bits (325), Expect = 6e-32
Identities = 59/149 (39%), Positives = 91/149 (61%)
Frame = +1
Query: 274 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAV 453
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 454 LDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS 633
LD +R+ +NC LQGF ++ +Y + +S+ P+P+VS
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVS 176
Query: 634 DTVVEPYNAVLSIHQLVENTDETYCIDNE 720
VVEPYN++L+ H +E++D + +DNE
Sbjct: 177 TAVVEPYNSILTTHTTLEHSDCAFMVDNE 205
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 134 bits (323), Expect = 1e-31
Identities = 61/163 (37%), Positives = 101/163 (61%), Gaps = 3/163 (1%)
Frame = +1
Query: 241 NEASVAT--AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWA 411
N S+ T +++G G++VPR+I +DLEP +D +R+GAY +LF P+ + G+ A NN+A
Sbjct: 42 NSGSLGTFFSDTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYA 101
Query: 412 KGHYTEGAELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDR 591
+GHYT G E++D LD +R+ NC+ LQGF ++ EY +
Sbjct: 102 RGHYTVGKEIIDTTLDRIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKK 161
Query: 592 IMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 720
+S+ P+P++S +VVEPYN++L+ H +E++D ++ +DNE
Sbjct: 162 SKLEFSIYPAPQISTSVVEPYNSILTTHTTLEHSDCSFMVDNE 204
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 132 bits (320), Expect = 2e-31
Identities = 58/149 (38%), Positives = 90/149 (60%)
Frame = +1
Query: 274 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAV 453
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D V
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTV 116
Query: 454 LDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS 633
LD +R+ +NC LQGF ++ +Y + +S+ P+P+V
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVC 176
Query: 634 DTVVEPYNAVLSIHQLVENTDETYCIDNE 720
VVEPYN++L+ H +E++D + +DNE
Sbjct: 177 TAVVEPYNSILTTHTTLEHSDCAFMVDNE 205
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 132 bits (319), Expect = 3e-31
Identities = 58/149 (38%), Positives = 90/149 (60%)
Frame = +1
Query: 274 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAV 453
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTT 116
Query: 454 LDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS 633
LD +R+ +NC LQGF ++ +Y + +S+ P+P+VS
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVS 176
Query: 634 DTVVEPYNAVLSIHQLVENTDETYCIDNE 720
VVEPYN++L+ H +E++D + +DNE
Sbjct: 177 TAVVEPYNSILTTHTTLEHSDCAFMVDNE 205
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 132 bits (319), Expect = 3e-31
Identities = 58/154 (37%), Positives = 95/154 (61%), Gaps = 1/154 (0%)
Frame = +1
Query: 262 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 438
+E+G G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 113
Query: 439 LVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 618
++D LD +R+ +NC LQGF ++ +Y + +S+ P
Sbjct: 114 IIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP 173
Query: 619 SPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 720
+P+VS VVEPYN++L+ H +E++D ++ +DNE
Sbjct: 174 APQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNE 207
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 132 bits (319), Expect = 3e-31
Identities = 58/154 (37%), Positives = 95/154 (61%), Gaps = 1/154 (0%)
Frame = +1
Query: 262 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 438
+E+G G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E
Sbjct: 53 SETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 112
Query: 439 LVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 618
++D LD +R+ +NC LQGF ++ +Y + +S+ P
Sbjct: 113 IIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP 172
Query: 619 SPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 720
+P+VS VVEPYN++L+ H +E++D ++ +DNE
Sbjct: 173 APQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNE 206
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 132 bits (319), Expect = 3e-31
Identities = 58/149 (38%), Positives = 90/149 (60%)
Frame = +1
Query: 274 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAV 453
G+YVPR+I +DLEP +D +R+G Y +LF P+ + G+ A NN+A+GHYT G EL+D
Sbjct: 57 GRYVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTT 116
Query: 454 LDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS 633
LD +R+ +NC LQGF ++ +Y + +S+ P+P+VS
Sbjct: 117 LDRIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVS 176
Query: 634 DTVVEPYNAVLSIHQLVENTDETYCIDNE 720
VVEPYN++L+ H +E++D + +DNE
Sbjct: 177 TAVVEPYNSILTTHTTLEHSDCAFMVDNE 205
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 132 bits (319), Expect = 3e-31
Identities = 58/154 (37%), Positives = 95/154 (61%), Gaps = 1/154 (0%)
Frame = +1
Query: 262 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 438
+E+G G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 113
Query: 439 LVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 618
++D LD +R+ +NC LQGF ++ +Y + +S+ P
Sbjct: 114 IIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP 173
Query: 619 SPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 720
+P+VS VVEPYN++L+ H +E++D ++ +DNE
Sbjct: 174 APQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNE 207
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 132 bits (319), Expect = 3e-31
Identities = 58/154 (37%), Positives = 95/154 (61%), Gaps = 1/154 (0%)
Frame = +1
Query: 262 AESG-GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAE 438
+E+G G++VPRA+++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E
Sbjct: 54 SETGSGRHVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKE 113
Query: 439 LVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVP 618
++D LD +R+ +NC LQGF ++ +Y + +S+ P
Sbjct: 114 IIDLTLDRIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYP 173
Query: 619 SPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 720
+P+VS VVEPYN++L+ H +E++D ++ +DNE
Sbjct: 174 APQVSTAVVEPYNSILTTHTTLEHSDCSFMVDNE 207
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 130 bits (314), Expect = 1e-30
Identities = 58/149 (38%), Positives = 92/149 (61%)
Frame = +1
Query: 274 GKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAV 453
GK+VPRAI++DLEP +D +R+G Y LF P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 64 GKHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVV 123
Query: 454 LDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVS 633
+D VR+ ENC LQGF ++ +Y + + + P+P+VS
Sbjct: 124 MDRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVS 183
Query: 634 DTVVEPYNAVLSIHQLVENTDETYCIDNE 720
++VEPYN++L+ H +E++D ++ +DNE
Sbjct: 184 TSMVEPYNSILTTHTTLEHSDCSFMVDNE 212
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 129 bits (311), Expect = 3e-30
Identities = 62/173 (35%), Positives = 100/173 (57%)
Frame = +1
Query: 202 TSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVF 381
T D + E I+ ++ E + GGK+VPR + +DLEP +D VR+G Y LF P+ +
Sbjct: 47 TYDEETETINTFFAETA------GGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLS 100
Query: 382 GQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXX 561
G+ A N +A+G YT G E++D V+D V++ ENC+ LQGF
Sbjct: 101 GKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLM 160
Query: 562 XKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 720
++ EY + +++ P+P+VS ++VEPYN++L H +E++D T+ +DNE
Sbjct: 161 ERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNE 213
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 129 bits (311), Expect = 3e-30
Identities = 62/173 (35%), Positives = 100/173 (57%)
Frame = +1
Query: 202 TSDLQLERISVYYNEASVATAESGGKYVPRAILLDLEPGTMDAVRSGAYGQLFRPDNFVF 381
T D + E I+ ++ E + GGK+VPR + +DLEP +D VR+G Y LF P+ +
Sbjct: 19 TYDEETETINTFFAETA------GGKHVPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLS 72
Query: 382 GQSGAGNNWAKGHYTEGAELVDAVLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXX 561
G+ A N +A+G YT G E++D V+D V++ ENC+ LQGF
Sbjct: 73 GKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLM 132
Query: 562 XKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNAVLSIHQLVENTDETYCIDNE 720
++ EY + +++ P+P+VS ++VEPYN++L H +E++D T+ +DNE
Sbjct: 133 ERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTFMVDNE 185
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 105 bits (253), Expect = 3e-23
Identities = 60/169 (35%), Positives = 88/169 (52%), Gaps = 4/169 (2%)
Frame = +1
Query: 280 YVPRAILLDLEPGTMDAV-RSGAYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDA 450
YVPRA+L+DLEP ++ + +S + LF DN GAGNNWA G Y +G E+ +
Sbjct: 61 YVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEK 119
Query: 451 VLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKV 630
++D++ +E EN + L G ++RE +P +++ TYSV +
Sbjct: 120 IMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDT 179
Query: 631 S-DTVVEPYNAVLSIHQLVENTDETYCIDNEXPLRYLLQDSXGYRTPTY 774
S D VV PYN VLS+ +L+EN D +DN L L TPT+
Sbjct: 180 STDVVVHPYNWVLSMQRLIENPDHVVVLDN-AALHRLAAGKFKTDTPTF 227
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 105 bits (253), Expect = 3e-23
Identities = 60/169 (35%), Positives = 88/169 (52%), Gaps = 4/169 (2%)
Frame = +1
Query: 280 YVPRAILLDLEPGTMDAV-RSGAYGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDA 450
YVPRA+L+DLEP ++ + +S + LF DN GAGNNWA G Y +G E+ +
Sbjct: 61 YVPRAVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEK 119
Query: 451 VLDVVRKECENCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKV 630
++D++ +E EN + L G ++RE +P +++ TYSV +
Sbjct: 120 IMDIIIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDT 179
Query: 631 S-DTVVEPYNAVLSIHQLVENTDETYCIDNEXPLRYLLQDSXGYRTPTY 774
S D VV PYN VLS+ +L+EN D +DN L L TPT+
Sbjct: 180 STDVVVHPYNWVLSMQRLIENPDHVVVLDN-AALHRLAAGKFKTDTPTF 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,132,329
Number of Sequences: 27780
Number of extensions: 272016
Number of successful extensions: 829
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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