Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP12_F_A03
(1192 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0904 + 20717005-20718087 39 0.007
07_03_0089 - 13300902-13301645 38 0.016
11_06_0610 - 25449085-25453284 38 0.021
05_03_0040 - 7646525-7647775 32 0.77
07_03_0091 + 13312904-13313647 32 1.0
12_02_1174 - 26696869-26698191 31 1.3
01_02_0007 + 10132380-10133201 31 1.3
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 3.1
>04_03_0904 + 20717005-20718087
Length = 360
Score = 39.1 bits (87), Expect = 0.007
Identities = 40/181 (22%), Positives = 46/181 (25%), Gaps = 6/181 (3%)
Frame = +3
Query: 663 PNXPNPRXKXTPPPXNXRXPHDRXP----XXXXXXAPXXTXRRPXXTPXAXETXPXPXXP 830
P P K PP + PH P P T +P TP P P P
Sbjct: 35 PTPVKPAPKPEKPPKEHKPPHHHEPKPEKPPKEHKPPAYTPPKPTPTPPTYTPTPKPTPP 94
Query: 831 RTXPXXNXKXXNNPERPXXAXXTXAPDXXXPXXGXXPXRTPQXPXXXXTXP--KXXPXXX 1004
P + P P P P P TP T P K P
Sbjct: 95 PYTPKPT-PPAHTPTPPTYTPTPTPPKPTPPTYKPQPKPTPAPYTPTPTPPTYKPQPKPT 153
Query: 1005 XPTXXXPXGPXXPXXAXQKNXPPTXXHXEXXXXRXXXPXXEXHSQXPPXPQXAPXPXPMK 1184
P P P PP+ P ++ P P P P P
Sbjct: 154 PPPTYKPQPKPTPTPYTPTPTPPS-------YKPQPKPTPTPYTPTPTPPSYKPQPKPTP 206
Query: 1185 T 1187
T
Sbjct: 207 T 207
Score = 38.7 bits (86), Expect = 0.009
Identities = 38/185 (20%), Positives = 46/185 (24%), Gaps = 5/185 (2%)
Frame = +3
Query: 648 TRSXAPNXPNPRXKXTPPPXNXRXPHDRXPXXXXXXAPXXTXRRPXXTPXAXETXPXPXX 827
T + P P K TPP P P +P TP P P
Sbjct: 86 TPTPKPTPPPYTPKPTPPAHTPTPPTYTPTPTPPKPTPPTYKPQPKPTPAPYTPTPTPPT 145
Query: 828 PRTXPXXNXKXXNNPE-RPXXAXXTXAPDXXXPXXGXXPXRTPQXPXXXXTX----PKXX 992
+ P P+ +P T P P TP P PK
Sbjct: 146 YKPQPKPTPPPTYKPQPKPTPTPYTPTPTPPSYKPQPKPTPTPYTPTPTPPSYKPQPKPT 205
Query: 993 PXXXXPTXXXPXGPXXPXXAXQKNXPPTXXHXEXXXXRXXXPXXEXHSQXPPXPQXAPXP 1172
P PT P P P + P + + P P P P
Sbjct: 206 PTPYTPTPTPPSYKPQPKPNPPPTYKPQPKPNPPPTYKPAPPTYKPQPKPNPPPTYKPQP 265
Query: 1173 XPMKT 1187
P T
Sbjct: 266 KPTPT 270
Score = 29.5 bits (63), Expect = 5.4
Identities = 28/128 (21%), Positives = 33/128 (25%), Gaps = 1/128 (0%)
Frame = +3
Query: 663 PNXPNPRXKXTPPPXNXRXPHDRXPXXXXXXAPXXTXRRPXXTPXAXETXPXPXXPRTXP 842
PN P P K PP + + P P T P + P P P
Sbjct: 236 PNPP-PTYKPAPPTYKPQPKPNPPPTYKPQPKPTPTPYTPPTYKPQPKPTPTPTPYTPTP 294
Query: 843 XXNXKXXNNPE-RPXXAXXTXAPDXXXPXXGXXPXRTPQXPXXXXTXPKXXPXXXXPTXX 1019
N P+ +P P P TP P P P P
Sbjct: 295 KPNPPPTYKPQPKPTPTPTPYKPQPKPTPSPYTPKPTPTPPTY---TPTPTPPYHKPPPS 351
Query: 1020 XPXGPXXP 1043
GP P
Sbjct: 352 YTPGPPPP 359
>07_03_0089 - 13300902-13301645
Length = 247
Score = 37.9 bits (84), Expect = 0.016
Identities = 40/172 (23%), Positives = 48/172 (27%)
Frame = +3
Query: 663 PNXPNPRXKXTPPPXNXRXPHDRXPXXXXXXAPXXTXRRPXXTPXAXETXPXPXXPRTXP 842
P PNP+ TP P P + P P +P P T P P P+ P
Sbjct: 39 PADPNPKPDPTPKPQPETKPSPQ-PNPQPNPQPDP---KPSPQPDPKPT-PQP-EPKQDP 92
Query: 843 XXNXKXXNNPERPXXAXXTXAPDXXXPXXGXXPXRTPQXPXXXXTXPKXXPXXXXPTXXX 1022
N + P T PD P P P PK P
Sbjct: 93 KPNPQPDPKPSPQPDPKPTPQPD---PKQDPQPNPQPDPKPTPQPNPKQDPQPNPQPDPK 149
Query: 1023 PXGPXXPXXAXQKNXPPTXXHXEXXXXRXXXPXXEXHSQXPPXPQXAPXPXP 1178
P P Q N P+ + P E P P+ P P P
Sbjct: 150 PTPQPDPKQDPQPNPQPS-PKADPKPNPKPKPQPEPSPNPKPEPKPEPKPEP 200
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 37.5 bits (83), Expect = 0.021
Identities = 34/178 (19%), Positives = 50/178 (28%), Gaps = 2/178 (1%)
Frame = +3
Query: 645 QTRSXAPNXPNPRXKXTPPPXNXRXPHDRXPXXXXXXAPXXTXRRPXXTPXAXETXPXPX 824
++++ +P P P TP P P ++ P + P P P
Sbjct: 655 ESKASSPPPPTPEGH-TPSPPKSTPPTEKSPPTPESESSSP----PPPAPEGHMPSPPKS 709
Query: 825 XP--RTXPXXNXKXXNNPERPXXAXXTXAPDXXXPXXGXXPXRTPQXPXXXXTXPKXXPX 998
P P ++P P T +P P P P P + P
Sbjct: 710 TPPVEKSPPTPESEASSPPPPAPEGHTPSPPKSSPPEEKSP---PIPPTSHTSPPTPEEY 766
Query: 999 XXXPTXXXPXGPXXPXXAXQKNXPPTXXHXEXXXXRXXXPXXEXHSQXPPXPQXAPXP 1172
P P P + PP+ H P PP P+ +P P
Sbjct: 767 TPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSP 824
Score = 34.7 bits (76), Expect = 0.14
Identities = 35/179 (19%), Positives = 50/179 (27%), Gaps = 7/179 (3%)
Frame = +3
Query: 672 PNPRXKXTPPPXNXRXPHDRXPXXXXXXAPXX-TXRRPXXTPXAXETXPXPXXPRTXPXX 848
P+P K TPP + AP T P +P ++ P P T P
Sbjct: 704 PSP-PKSTPPVEKSPPTPESEASSPPPPAPEGHTPSPPKSSPPEEKSPPIPPTSHTSPPT 762
Query: 849 NXKXXNNPERPXXAXXTXAPDXXXPXXGXXPXRTPQXPXXXXTXPKXXPXXXXPTXXXPX 1028
+ +P + P P + P PT
Sbjct: 763 PEEYTPSPPKSSPPEEKSPPPHSPEKSPPSEAHPTSPPPSEKSPPTPAEESSPPTPEKSP 822
Query: 1029 GPXX-----PXXAXQKNXPPTXXHXEXXXX-RXXXPXXEXHSQXPPXPQXAPXPXPMKT 1187
P P + + PP H + P E H PP P+ +P P K+
Sbjct: 823 SPPSGHEGTPPSPVKSSSPPPEAHVSSPPPEKSSSPPPEAHVSSPPPPEKSPPPPETKS 881
Score = 33.9 bits (74), Expect = 0.25
Identities = 48/218 (22%), Positives = 60/218 (27%), Gaps = 12/218 (5%)
Frame = +3
Query: 570 PQXAXXTXRXXPXXPRQXKXRXXKXQTRSXAPNXPNPRXKX-TPPPXNXRXPHDRXPXXX 746
PQ T P P K A + P P + TP P P P
Sbjct: 531 PQAEPPTEYSPPATPESSPPPEGKSPPTPTASHSPPPVPEGHTPSPPKSGPPAGESPPTP 590
Query: 747 XXXA-PXXTXRR-----PXXTPXAXETXPXPXXPRTXPXXNXKXXNNPERPXXAXXTXAP 908
A P T P TP A ++ P P + P + P P + P
Sbjct: 591 ESKASPPPTPEEYTPSPPKSTPPAEKSPPTPESKASSPPPPAPEGHTPSPP----ESTPP 646
Query: 909 DXXXPXXGXXPXRTPQXPXXXXTXPKXXPXXXXPTXXXPXGP-----XXPXXAXQKNXPP 1073
P +P P P P PT P P P A + + P
Sbjct: 647 SEKSPPTPESKASSPPPPTPEGHTPS-PPKSTPPTEKSPPTPESESSSPPPPAPEGHMPS 705
Query: 1074 TXXHXEXXXXRXXXPXXEXHSQXPPXPQXAPXPXPMKT 1187
P E S PP P+ P P K+
Sbjct: 706 PPKSTPPVEKSPPTPESEASSPPPPAPE-GHTPSPPKS 742
Score = 31.5 bits (68), Expect = 1.3
Identities = 36/181 (19%), Positives = 49/181 (27%), Gaps = 9/181 (4%)
Frame = +3
Query: 672 PNPRXKXTPPPXNXRXPH---DRXPXXXXXXAPXXTXRRPXXTPXAXETXPXPXXPRTXP 842
P P K PPP P + P P T E P P + P
Sbjct: 867 PPPPEKSPPPPETKSPPTLTPEISPPPEGKSPPSHTPESSSPPSKESEPPPTPTPKSSPP 926
Query: 843 XXNXKXXNNPERPXXAXXTXAPDXXXPXXGXXPXRT---PQXPXXXXTXP---KXXPXXX 1004
+P + +P P P P P + P + P
Sbjct: 927 SHEEYVPPSPAKSTPPPEEKSPPSHTPESSSPPSEESEPPPSPTPKSSPPSHEEYVPPSP 986
Query: 1005 XPTXXXPXGPXXPXXAXQKNXPPTXXHXEXXXXRXXXPXXEXHSQXPPXPQXAPXPXPMK 1184
+ P P P + PP+ P SQ PP P + P P+K
Sbjct: 987 AKSTPPPEKPLPPHTPTINSSPPSEEEYMPPSPVKSSPPPAEKSQPPPSPVESVLP-PVK 1045
Query: 1185 T 1187
+
Sbjct: 1046 S 1046
>05_03_0040 - 7646525-7647775
Length = 416
Score = 32.3 bits (70), Expect = 0.77
Identities = 35/171 (20%), Positives = 42/171 (24%), Gaps = 2/171 (1%)
Frame = +3
Query: 672 PNPRXKXTPPPXNXRXPHDRXPXXXXXXAPXXTXRRPXXTPXAX-ETXPXPXX-PRTXPX 845
P P K P P P + P P E P P P+ P
Sbjct: 132 PKPEPKPYPEPKPEPKPEPKPEPKPEPKPKPEPKPHPEPKPDPKPEPKPHPEPEPKPEPK 191
Query: 846 XNXKXXNNPERPXXAXXTXAPDXXXPXXGXXPXRTPQXPXXXXTXPKXXPXXXXPTXXXP 1025
K PE P+ P P P+ PK P P
Sbjct: 192 PEPKPHPEPEPKPEPKPEPKPEPK-PEPKPEPKPKPKPEPKPKPEPKPYPEPKPKPEPKP 250
Query: 1026 XGPXXPXXAXQKNXPPTXXHXEXXXXRXXXPXXEXHSQXPPXPQXAPXPXP 1178
P K P E P + H + P P+ P P P
Sbjct: 251 E-PKPEPKPEPKPEPKPEPKPEPKPEPKPKPEPKPHPKPEPKPEPKPEPKP 300
Score = 31.9 bits (69), Expect = 1.0
Identities = 37/170 (21%), Positives = 45/170 (26%), Gaps = 1/170 (0%)
Frame = +3
Query: 672 PNPRXKXTPPPXNXRXPHDRXPXXXXXXAPXXTXRRPXXTPXAXETXPXPXXPRTXPXXN 851
P P+ K P P P + P P + P P E P P P P
Sbjct: 56 PEPKPKPKPHPKPTPKPEPK-PEPEPKPVPEPEPK-PEPKP---EPKPEPK-PEPKPYPE 109
Query: 852 XKXXNNPE-RPXXAXXTXAPDXXXPXXGXXPXRTPQXPXXXXTXPKXXPXXXXPTXXXPX 1028
K PE +P P P P+ PK P P
Sbjct: 110 PKPEPKPEPKPEPEPKPEPKPEPKPEPKPYPEPKPEPKPEPKPEPKPEPKPKPEPKPHPE 169
Query: 1029 GPXXPXXAXQKNXPPTXXHXEXXXXRXXXPXXEXHSQXPPXPQXAPXPXP 1178
P P H E P + H + P P+ P P P
Sbjct: 170 PKPDPK-------PEPKPHPEPEPKPEPKPEPKPHPEPEPKPEPKPEPKP 212
Score = 31.1 bits (67), Expect = 1.8
Identities = 35/189 (18%), Positives = 47/189 (24%)
Frame = +3
Query: 612 PRQXKXRXXKXQTRSXAPNXPNPRXKXTPPPXNXRXPHDRXPXXXXXXAPXXTXRRPXXT 791
P+ K + + P P K P P P +P
Sbjct: 178 PKPHPEPEPKPEPKPEPKPHPEPEPKPEPKPEPKPEPKPEPKPEPKPKPKPEPKPKPEPK 237
Query: 792 PXAXETXPXPXXPRTXPXXNXKXXNNPERPXXAXXTXAPDXXXPXXGXXPXRTPQXPXXX 971
P E P P P+ P K PE P+ P P P+
Sbjct: 238 PYP-EPKPKPE-PKPEPKPEPKPEPKPEPKPEPKPEPKPEPK-PKPEPKPHPKPEPKPEP 294
Query: 972 XTXPKXXPXXXXPTXXXPXGPXXPXXAXQKNXPPTXXHXEXXXXRXXXPXXEXHSQXPPX 1151
PK P P P + P + P + H + P
Sbjct: 295 KPEPKPEPKPEPKPEPKPEPEPKPEPKPEPKPEPKPYPEPKPDPK---PEPKPHPEPKPE 351
Query: 1152 PQXAPXPXP 1178
P+ P P P
Sbjct: 352 PKPQPEPKP 360
>07_03_0091 + 13312904-13313647
Length = 247
Score = 31.9 bits (69), Expect = 1.0
Identities = 40/178 (22%), Positives = 50/178 (28%), Gaps = 6/178 (3%)
Frame = +3
Query: 663 PNXPNPRXKXTPPPXNXRXPHDRX-PXXXXXXAPXXTXRR-PXXTPXAX---ETXPXPXX 827
P P P+ TP P P + P P + + P TP + P P
Sbjct: 39 PADPKPKPDPTPKPQPETKPSPQPNPQPNPQPDPKPSPQPDPKPTPQPEPKQDPQPNPQP 98
Query: 828 -PRTXPXXNXKXXNNPERPXXAXXTXAPDXXXPXXGXXPXRTPQXPXXXXTXPKXXPXXX 1004
P+ P + K P PD P P + PQ PK P
Sbjct: 99 DPKQSPQPDPKPTPQPNPKQDPQPNPQPDPK-PTLQPNPKQDPQP--NPQPNPKPTPQLD 155
Query: 1005 XPTXXXPXGPXXPXXAXQKNXPPTXXHXEXXXXRXXXPXXEXHSQXPPXPQXAPXPXP 1178
P P A K P E P E + P P+ P P P
Sbjct: 156 PKQDPQP-NPQPSPKADPKPNPKPKPQPEPSPNPKPEPKPEPKPEPSPNPKPNPNPKP 212
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.5 bits (68), Expect = 1.3
Identities = 37/180 (20%), Positives = 42/180 (23%), Gaps = 2/180 (1%)
Frame = +3
Query: 639 KXQTRSXAPNXPNPRXKXTPP--PXNXRXPHDRXPXXXXXXAPXXTXRRPXXTPXAXETX 812
+ +TR P+ P P PP P P P P +P P
Sbjct: 130 RTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPS 189
Query: 813 PXPXXPRTXPXXNXKXXNNPERPXXAXXTXAPDXXXPXXGXXPXRTPQXPXXXXTXPKXX 992
P P P P +P T P P P RTP PK
Sbjct: 190 PPPPPPTRPPSVKPPVVQPKPQP---PPTLPPPSPPPPPPTVPPRTP-GDTPAVVEPKPQ 245
Query: 993 PXXXXPTXXXPXGPXXPXXAXQKNXPPTXXHXEXXXXRXXXPXXEXHSQXPPXPQXAPXP 1172
P P P E E PP P P P
Sbjct: 246 PPPPPPRAPVKMPRVLEPKPSPPPPSPLPPPPEDYWSPTAVTPPEPTKPKPPPPSPPPPP 305
>01_02_0007 + 10132380-10133201
Length = 273
Score = 31.5 bits (68), Expect = 1.3
Identities = 34/172 (19%), Positives = 42/172 (24%)
Frame = +3
Query: 663 PNXPNPRXKXTPPPXNXRXPHDRXPXXXXXXAPXXTXRRPXXTPXAXETXPXPXXPRTXP 842
PN PNP+ + P P P + P P P P P+ P
Sbjct: 64 PN-PNPQPQPLPQPQPQPQPQPQ-PLPQPQPQPQPLPL-PGPQPLPQPGPQPNPNPQPLP 120
Query: 843 XXNXKXXNNPERPXXAXXTXAPDXXXPXXGXXPXRTPQXPXXXXTXPKXXPXXXXPTXXX 1022
N P+ A P P P P P
Sbjct: 121 QPNPNPQPLPQPDPNAPPLPLPQPNPNNPQPLPQPDPNAPSLPLPQPDPNAPPLPLPQPD 180
Query: 1023 PXGPXXPXXAXQKNXPPTXXHXEXXXXRXXXPXXEXHSQXPPXPQXAPXPXP 1178
P P P N P + P + +S P PQ P P
Sbjct: 181 PNAPPQPLPQPDPNNPQPLPQPDPNAPPQPLPQPDPNSPPQPLPQPDPNTPP 232
>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.3 bits (65), Expect = 3.1
Identities = 25/103 (24%), Positives = 27/103 (26%)
Frame = +3
Query: 870 PERPXXAXXTXAPDXXXPXXGXXPXRTPQXPXXXXTXPKXXPXXXXPTXXXPXGPXXPXX 1049
P +P P P G P PQ P P P P P
Sbjct: 19 PPQPPPMNPYGPPPPQQPAYGHMPP--PQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGP 76
Query: 1050 AXQKNXPPTXXHXEXXXXRXXXPXXEXHSQXPPXPQXAPXPXP 1178
Q+ PP P SQ PP P P P P
Sbjct: 77 PQQQQPPPPP-QMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPP 118
Score = 28.7 bits (61), Expect = 9.5
Identities = 25/121 (20%), Positives = 28/121 (23%), Gaps = 1/121 (0%)
Frame = +3
Query: 813 PXPXXPRTXPXXNXKXXNNPERPXXAXXTXAPDXXXPXXGXXPXRTPQXPXXXXTXPKXX 992
P P P P + P A P G P PQ +
Sbjct: 22 PPPMNPYGPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQ 81
Query: 993 PXXXXPTXXXPXGPXXPXXAXQKNXPPTXXHXEXXXXRXXXPXXEXHSQXPP-XPQXAPX 1169
P P P P PP P +Q PP Q AP
Sbjct: 82 PPPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPP 141
Query: 1170 P 1172
P
Sbjct: 142 P 142
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.311 0.129 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,584,719
Number of Sequences: 37544
Number of extensions: 143592
Number of successful extensions: 395
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 372
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3631571424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -