Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_P24
         (951 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585     29   5.4  
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27...    29   7.2  
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    28   9.5  
07_01_0080 + 587674-588510                                             28   9.5  

>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
          Length = 268

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +1

Query: 889 PPPXXXGXPPKPPPXRXP 942
           PPP     PPKPPP + P
Sbjct: 140 PPPCKPEEPPKPPPEKPP 157


>12_01_0033 -
           272848-272943,274026-274169,274264-274375,274521-274702,
           274781-274912,275038-276330,279841-280545,280649-280695,
           280787-280865
          Length = 929

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = +1

Query: 853 PGRXPGNXVXXFPPPXXXGXPPKPPP 930
           P R PG      PPP   G PP PPP
Sbjct: 617 PPRPPGAPPPP-PPPGKPGGPPPPPP 641



 Score = 28.3 bits (60), Expect = 9.5
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +1

Query: 889 PPPXXXGXPPKPPPXRXP 942
           PPP   G PP PPP   P
Sbjct: 616 PPPRPPGAPPPPPPPGKP 633


>11_01_0035 -
           256087-256185,256287-256430,256521-256632,256777-256958,
           257038-257169,257297-258589,259133-259837,260465-260549,
           260604-260650,260810-260900,261838-262101,262195-262309,
           262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +1

Query: 889 PPPXXXGXPPKPPPXRXP 942
           PPP   G PP PPP   P
Sbjct: 921 PPPRPPGAPPPPPPPGKP 938


>07_01_0080 + 587674-588510
          Length = 278

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +1

Query: 889 PPPXXXGXPPKPPPXRXP 942
           PPP   G PP PPP   P
Sbjct: 96  PPPPSSGSPPPPPPPPPP 113


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,973,501
Number of Sequences: 37544
Number of extensions: 188742
Number of successful extensions: 2061
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1761
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)