Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_P19
         (929 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038618-4|AAB92069.1|  181|Caenorhabditis elegans Hypothetical ...    56   4e-08
AF038618-5|AAO91720.1|   60|Caenorhabditis elegans Hypothetical ...    51   1e-06
AF036688-8|AAB88314.2|  482|Caenorhabditis elegans Hypothetical ...    30   2.1  
Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical pr...    30   2.7  
U50191-7|AAK31555.2|  454|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z72505-1|CAA96608.1|  338|Caenorhabditis elegans Hypothetical pr...    29   4.7  
Z46343-1|CAA86456.2|  356|Caenorhabditis elegans Hypothetical pr...    29   4.7  
AF016448-17|AAB65962.1|  656|Caenorhabditis elegans Hypothetical...    29   4.7  
U49956-8|AAA93436.1|  765|Caenorhabditis elegans Hypothetical pr...    28   8.3  
U49956-7|AAL32232.1|  753|Caenorhabditis elegans Hypothetical pr...    28   8.3  
U49956-6|ABD94087.1|  762|Caenorhabditis elegans Hypothetical pr...    28   8.3  
U49956-5|ABD94086.1|  762|Caenorhabditis elegans Hypothetical pr...    28   8.3  

>AF038618-4|AAB92069.1|  181|Caenorhabditis elegans Hypothetical
           protein F42G8.10a protein.
          Length = 181

 Score = 56.0 bits (129), Expect = 4e-08
 Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 6/98 (6%)
 Frame = +1

Query: 478 KNWVSYGFDYTSKEED-TNAHHATFFFSVTLCIVFGGVCWAY--SPDVHM-RDWAQREAF 645
           + W+ +      + +D    H A F     L   F   CW     PD  M R+WA REA 
Sbjct: 83  REWIWFSQIAHDEHKDWARFHQAAFLLFTVLTTWF--TCWIMFARPDWPMGREWALREAH 140

Query: 646 LELRRREKAGLPPISPNFI--DPXLIKLPDESELCDVE 753
           LE+ RREKAGLP ISP+ I  D     LP + EL D +
Sbjct: 141 LEIARREKAGLPLISPDLIPRDRVAATLPSDEELRDFD 178


>AF038618-5|AAO91720.1|   60|Caenorhabditis elegans Hypothetical
           protein F42G8.10b protein.
          Length = 60

 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 29/53 (54%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
 Frame = +1

Query: 604 PDVHM-RDWAQREAFLELRRREKAGLPPISPNFI--DPXLIKLPDESELCDVE 753
           PD  M R+WA REA LE+ RREKAGLP ISP+ I  D     LP + EL D +
Sbjct: 5   PDWPMGREWALREAHLEIARREKAGLPLISPDLIPRDRVAATLPSDEELRDFD 57


>AF036688-8|AAB88314.2|  482|Caenorhabditis elegans Hypothetical
           protein C24D10.1 protein.
          Length = 482

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = +1

Query: 397 NKVSRNISTSKKNSDTATTACETKTEDKNWVSYGFDYTSKEEDTNA 534
           NK  + +ST+ +N D AT    TKT  K   S G D   +E +  A
Sbjct: 15  NKDGKLMSTASRNGDEATKPNGTKTSKKRKPSRGNDDKGREPEPTA 60


>Z75531-4|CAA99805.1|  408|Caenorhabditis elegans Hypothetical
           protein C54D10.4 protein.
          Length = 408

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
 Frame = +1

Query: 592 WAYSPDVHMRD---WAQREAFLELRRREKAGLPPISPNFIDPXLIK 720
           W +S ++H+ D   WA R+   E ++ E+    P+SP  I    IK
Sbjct: 360 WRHSLEIHVNDHRMWAMRKTAKETKKIEEKNPSPVSPVNISSFNIK 405


>U50191-7|AAK31555.2|  454|Caenorhabditis elegans Hypothetical
           protein T14B4.9 protein.
          Length = 454

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +1

Query: 544 TFFFSVTLCIVFGGVCWAYSPDVHMRDWAQREAFLELRRREKAGL 678
           TFFF +   +V   V ++ +P + M  W  +E  +  RR+E A L
Sbjct: 8   TFFFLLLTMLVCTIVIFSMAPRITMSFWTSKETNILWRRKETAHL 52


>Z72505-1|CAA96608.1|  338|Caenorhabditis elegans Hypothetical
           protein C50C10.2 protein.
          Length = 338

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -3

Query: 843 PRRGXXXXXFVNKRFTKPYVWIEXLYLDDYFNITQLGFIRQL 718
           PR        +  RF  P+++I  L L   FN+T +GF +QL
Sbjct: 139 PRHNERYCRLIMYRFAIPFLFIVPLALS-LFNVTTVGFCKQL 179


>Z46343-1|CAA86456.2|  356|Caenorhabditis elegans Hypothetical
           protein T23F11.1 protein.
          Length = 356

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +1

Query: 385 WNHFNKVSRNISTSKKNSDTATTACETKTEDKNWVS 492
           W  FN+V+ N++ S+   D A   C+TK  ++  V+
Sbjct: 171 WVEFNRVNGNLALSRALGDFAFKNCDTKPAEEQIVT 206


>AF016448-17|AAB65962.1|  656|Caenorhabditis elegans Hypothetical
           protein F41E6.14 protein.
          Length = 656

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
 Frame = +1

Query: 247 PILYVLSDKYNLKVIRRVQSVNLRIVV---FRMAALIKLRHMPLVQRSIWNHFNKVSRNI 417
           PI+Y ++   NL    R+   +L I++   F++    +L +  L  R +W  F   S   
Sbjct: 149 PIIYFIAS--NLSNSNRIFGYSLAIIILFLFQLLTPFELSYCFLASR-VWQ-FLLGSVAF 204

Query: 418 STSKKNSDTATTACETKTEDKNW 486
             S+KN++T     E K   +NW
Sbjct: 205 DLSQKNNETMDFYIEMKKNKENW 227


>U49956-8|AAA93436.1|  765|Caenorhabditis elegans Hypothetical
           protein M03A1.6a protein.
          Length = 765

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +1

Query: 382 IWNHFNKVSRNISTSKKNSDTATTACETKTEDKN 483
           ++ H+ K  +N++ +KKN D  T    +  +D+N
Sbjct: 576 VYKHYLKKLKNLNKAKKNKDDKTADARSGGDDEN 609


>U49956-7|AAL32232.1|  753|Caenorhabditis elegans Hypothetical
           protein M03A1.6b protein.
          Length = 753

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +1

Query: 382 IWNHFNKVSRNISTSKKNSDTATTACETKTEDKN 483
           ++ H+ K  +N++ +KKN D  T    +  +D+N
Sbjct: 564 VYKHYLKKLKNLNKAKKNKDDKTADARSGGDDEN 597


>U49956-6|ABD94087.1|  762|Caenorhabditis elegans Hypothetical
           protein M03A1.6d protein.
          Length = 762

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +1

Query: 382 IWNHFNKVSRNISTSKKNSDTATTACETKTEDKN 483
           ++ H+ K  +N++ +KKN D  T    +  +D+N
Sbjct: 573 VYKHYLKKLKNLNKAKKNKDDKTADARSGGDDEN 606


>U49956-5|ABD94086.1|  762|Caenorhabditis elegans Hypothetical
           protein M03A1.6c protein.
          Length = 762

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +1

Query: 382 IWNHFNKVSRNISTSKKNSDTATTACETKTEDKN 483
           ++ H+ K  +N++ +KKN D  T    +  +D+N
Sbjct: 573 VYKHYLKKLKNLNKAKKNKDDKTADARSGGDDEN 606


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,298,302
Number of Sequences: 27780
Number of extensions: 361626
Number of successful extensions: 918
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)