Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_P17
(989 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 43 8e-05
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 37 0.005
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.012
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.062
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 32 0.11
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.11
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.19
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.25
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.33
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 1.0
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 1.8
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 2.3
SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyc... 27 3.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 7.1
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 42.7 bits (96), Expect = 8e-05
Identities = 47/210 (22%), Positives = 52/210 (24%), Gaps = 7/210 (3%)
Frame = +3
Query: 225 PPXPXPTXT----PAPRXPXPXXXXRXRPPXXXXXXXXXXSQXPASPXPXXRXXXPPXXQ 392
PP P P+ P P P PP S P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAP-SAPPPVPAPSSEIPSIPAPS 1080
Query: 393 GXXPXXV-SXXPPPPKPXAXTPXRPVXALQXXXXXXXXXXXXXXXXXXFXPQDPPXXXRG 569
G P S PP PKP P P ++ P P
Sbjct: 1081 GAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Query: 570 P-PRXXXXXPP-PXXXIXXPGPXTPRXXPXPXXPXKGXPPXRPRTXPXGPQXPPXRHPXX 743
P P+ PP P P P P P G PP P PP P
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV 1200
Query: 744 XAXAQXXSGXTXPREXPXXPRPXXXXXKTP 833
+ P P P P P
Sbjct: 1201 PKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 32.7 bits (71), Expect = 0.082
Identities = 25/85 (29%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Frame = +3
Query: 219 GXPPXPXPTXTPAPRXPXPXXXXRXRP-PXXXXXXXXXXSQXPASPXPXXRXXX--PPXX 389
G PP P P+ AP P P P P S+ P P P PP
Sbjct: 1157 GAPPVPKPSVA-APPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPST 1215
Query: 390 QGXXPXXVSXXPPPPKPXAXTPXRP 464
P + PP P P A P P
Sbjct: 1216 APPVPTPSAGLPPVPVPTAKAPPVP 1240
Score = 31.5 bits (68), Expect = 0.19
Identities = 40/176 (22%), Positives = 46/176 (26%), Gaps = 7/176 (3%)
Frame = +2
Query: 224 APP-PXXXXHXRXPXPXXXXQXPXXAPXPPXTXPPPXLPXPRLPXTXXP--RXKXPXXXR 394
APP P P P P + P PP P +P P P
Sbjct: 1031 APPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG 1090
Query: 395 XXPXXRXXXATPP---QTXXXHPGXARXGXXXXXXXXXXXXXXXXAXXXFXXPRPPPXAX 565
P + A PP + P A G P+P A
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAP 1150
Query: 566 RXPPXXXAXPAPXRADPXAGXXNPPXXXXPXP-PXQRPPPXXPXHXPXGAPAXPXP 730
P A P P + P P P P PP P P AP P P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP---PSEAPPVPKP 1203
Score = 31.5 bits (68), Expect = 0.19
Identities = 39/172 (22%), Positives = 43/172 (25%), Gaps = 3/172 (1%)
Frame = +3
Query: 219 GXPPXPXPTXTPAPRXPXPXXXXRXRPPXXXXXXXXXXSQXPASPXPXXRXXXPPXXQGX 398
G PP P P+ P P P +P P P P P
Sbjct: 1081 GAPPVPAPSGIP----PVP------KPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAA 1130
Query: 399 XPXXV-SXXPPPPKPXAXTPXRPVXALQXXXXXXXXXXXXXXXXXXFXPQDPPXXXRGPP 575
P V S PP PKP P P + P P PP
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPP 1190
Query: 576 RXXXXXPPPXXX--IXXPGPXTPRXXPXPXXPXKGXPPXRPRTXPXGPQXPP 725
PP + P P P P G PP T P P
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 27.9 bits (59), Expect = 2.3
Identities = 21/86 (24%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +3
Query: 210 PXXGXPPXPXPTXTPAPRXPXPXXXXRXRPPXXXXXXXXXXSQ-XPASPXPXXRXXXPPX 386
P G PP P P + AP P P PP S P P P + P
Sbjct: 1184 PAAGVPPVPPP--SEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPA 1241
Query: 387 XQGXXPXXVSXXPPPPKPXAXTPXRP 464
P + P P + P
Sbjct: 1242 PSSEAPSVSTPRSSVPSPHSNASPSP 1267
Score = 27.1 bits (57), Expect = 4.1
Identities = 42/224 (18%), Positives = 49/224 (21%), Gaps = 11/224 (4%)
Frame = +3
Query: 228 PXPXPTXTPAPRXPXPXXXXRXRPPXXXXXXXXXXSQXPASPXPXXRXXXPPXXQGXXPX 407
P P R P PP P++ P P
Sbjct: 999 PVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSG 1058
Query: 408 XVSXXPPPPKPXAXTPXRPVXALQXXXXXXXXXXXXXXXXXXFXPQDPPXXXRGP-PRXX 584
S PP P P + P P + P P P P
Sbjct: 1059 APSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPS 1118
Query: 585 XXXPPPXXXIXXPGPXTPRXXPXPXXPXKGXPP-XRPRTXPXGPQ---------XPPXRH 734
P P + P P P P PP P P P+ P
Sbjct: 1119 GAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGI 1178
Query: 735 PXXXAXAQXXSGXTXPREXPXXPRPXXXXXKTPQXXXXPXXSXP 866
P A P E P P+P P P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +2
Query: 230 PPXXXXHXRXPXPXXXXQXPXXAPXPPXTXPPPXLPXPRLPXTXXPRXKXP 382
PP P P P P P T PP P LP P K P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPP--PSTAPPVPTPSAGLPPVPVPTAKAP 1237
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 36.7 bits (81), Expect = 0.005
Identities = 30/92 (32%), Positives = 32/92 (34%), Gaps = 1/92 (1%)
Frame = -2
Query: 694 RGRXGGXPLXGXXGXGXXRGVXGPGXXIXXXGGGXXXXXRGGPRXXXGGSWGXKXXXGGG 515
RG GG G G G GPG G G GG GG G + GG
Sbjct: 183 RGHNGGG--FGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF 240
Query: 514 GXAXGGSWXG-GXWRAXTGLXGVXAXGLGGGG 422
G GG G G + G G G GG G
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 33.9 bits (74), Expect = 0.036
Identities = 25/80 (31%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Frame = -1
Query: 440 GFGGGWXXAXXXGGGXLXXXGXXXAGXGXXGGGXLGGXXXXXXXXXXGPXXXXGXXXGGT 261
GFGGG GG G G G G GG G G GG
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGL 251
Query: 260 -GXGXGCXXXXGGXXXXGGP 204
G G G GG GGP
Sbjct: 252 GGFGGGPGGFGGGPGGHGGP 271
Score = 31.5 bits (68), Expect = 0.19
Identities = 29/85 (34%), Positives = 30/85 (35%), Gaps = 5/85 (5%)
Frame = -2
Query: 724 GGXWGPXGXVRGRXGGXPLXGXXGXGXXRGVXGPGXXIXXXGG--GXXXXXRGGPRXXXG 551
GG +G G G GG P G G G G G G GG G GGP G
Sbjct: 187 GGGFGGFG---GGSGGPP-PGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Query: 550 GSWGXKXXXGG---GGXAXGGSWXG 485
G G GG G GG G
Sbjct: 243 GPGGFGGGLGGFGGGPGGFGGGPGG 267
Score = 29.9 bits (64), Expect = 0.58
Identities = 24/66 (36%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = -3
Query: 735 GGGXGXAGAPXGXCXGXXGGGLWXGGXGXXXXG-GXWXPAXGSARXGAGXAXXXGGXRXA 559
G G G G P G G GG GG G G G + G G G GG
Sbjct: 192 GFGGGSGGPPPG--PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPG---GFGGGPGG 246
Query: 558 XGGGLG 541
GGGLG
Sbjct: 247 FGGGLG 252
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.5 bits (78), Expect = 0.012
Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Frame = +2
Query: 548 PPPXAXRXPPXXXAXPAPXRADPXAGXXNPPXXXXPXPPXQRPP--PXXPXHXPXGAPAX 721
PP + P A P P +A P PP P P + PP P P P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQ--PAAPVKSPPSAPSLPSAVPPMPPKV 201
Query: 722 PXPP 733
P PP
Sbjct: 202 PPPP 205
Score = 32.3 bits (70), Expect = 0.11
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +2
Query: 542 PRPPPXAXRXPPXXXAXPAPXRADPXAGXXNPPXXXXPXPPXQRPPPXXPXHXPXGAPAX 721
P PP P A P P P P P P PPP P P+
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 722 PXPP 733
P P
Sbjct: 188 PSLP 191
Score = 29.9 bits (64), Expect = 0.58
Identities = 20/74 (27%), Positives = 22/74 (29%), Gaps = 1/74 (1%)
Frame = +1
Query: 247 PXPXPVPPXXXPXXXXGPXXXXXXXXXXPPRXPPPXXPXPAXQXPXXXKXPPP-XXXAXX 423
P P PP P P PP P P P+ P PPP A
Sbjct: 124 PPSAPAPPT--PQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV 181
Query: 424 HPPPNPXXXPRXGP 465
PP+ P P
Sbjct: 182 KSPPSAPSLPSAVP 195
Score = 29.1 bits (62), Expect = 1.0
Identities = 16/66 (24%), Positives = 18/66 (27%)
Frame = +1
Query: 208 PPCXXXPPXXXXXPXPXPVPPXXXPXXXXGPXXXXXXXXXXPPRXPPPXXPXPAXQXPXX 387
PP P P P PP P + PP P+ P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 388 XKXPPP 405
K PPP
Sbjct: 199 PKVPPP 204
Score = 27.5 bits (58), Expect = 3.1
Identities = 17/62 (27%), Positives = 20/62 (32%)
Frame = +2
Query: 551 PPXAXRXPPXXXAXPAPXRADPXAGXXNPPXXXXPXPPXQRPPPXXPXHXPXGAPAXPXP 730
PP A PP + P + P PP P + PP P PA P
Sbjct: 124 PPSAPA-PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK 182
Query: 731 PP 736
P
Sbjct: 183 SP 184
Score = 26.6 bits (56), Expect = 5.4
Identities = 19/61 (31%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Frame = +2
Query: 560 AXRXPPXXXAXPAPXRADPXAGXXNPPXXXXPXPPXQRPPPXXPXHXPXGAPAXP--XPP 733
A PP A P P PP P P P P P AP P PP
Sbjct: 120 ASAAPPSAPAPPTPQ------SELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Query: 734 P 736
P
Sbjct: 174 P 174
Score = 26.6 bits (56), Expect = 5.4
Identities = 20/75 (26%), Positives = 23/75 (30%), Gaps = 4/75 (5%)
Frame = +3
Query: 570 PPRXXXXXPPPXXXIXXP--GPXTPRXXPXPXXPXK--GXPPXRPRTXPXGPQXPPXRHP 737
PPR P P P P P P P P PP P P PP P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Query: 738 XXXAXAQXXSGXTXP 782
+ A + + P
Sbjct: 204 PPLSQAPVANTSSRP 218
Score = 26.2 bits (55), Expect = 7.1
Identities = 17/64 (26%), Positives = 20/64 (31%), Gaps = 3/64 (4%)
Frame = +3
Query: 621 PGPXTPRXX---PXPXXPXKGXPPXRPRTXPXGPQXPPXRHPXXXAXAQXXSGXTXPREX 791
P P TP+ P P PP P + P P P AQ + P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 792 PXXP 803
P P
Sbjct: 188 PSLP 191
Score = 25.8 bits (54), Expect = 9.4
Identities = 16/60 (26%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Frame = +2
Query: 176 PXXXPXXXXXXPXVXXAPPPXXXXHXRXPXPXXXXQXPXXAPXPPXTXP--PPXLPXPRL 349
P P P + PP P + P AP P P PP +P P L
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPL 206
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.1 bits (72), Expect = 0.062
Identities = 23/68 (33%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
Frame = +2
Query: 542 PRPPPXAXRXPPXXXAXPAPXRADPXAGXXNPPXXXXPXPPXQRPP---PXXPXHXPXGA 712
P PPP P A P + + PP P P PP P P P GA
Sbjct: 389 PAPPPAI----PGRSAPALPPLGNA-SRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGA 443
Query: 713 PAXPXPPP 736
PA P PP
Sbjct: 444 PAAPPLPP 451
Score = 29.5 bits (63), Expect = 0.77
Identities = 20/69 (28%), Positives = 20/69 (28%), Gaps = 2/69 (2%)
Frame = +1
Query: 253 PXPVPPXXXPXXXXG-PXXXXXXXXXXPPRXPPPXXPXP-AXQXPXXXKXPPPXXXAXXH 426
P P PP P P P PP P A P PP A
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 427 PPPNPXXXP 453
PPP P P
Sbjct: 476 PPPAPAPAP 484
Score = 29.5 bits (63), Expect = 0.77
Identities = 20/65 (30%), Positives = 22/65 (33%)
Frame = +2
Query: 542 PRPPPXAXRXPPXXXAXPAPXRADPXAGXXNPPXXXXPXPPXQRPPPXXPXHXPXGAPAX 721
P PP PP P+ + P PP P P P P P PA
Sbjct: 418 PTPPSLPPSAPPSLP--PSAPPSLPMGAPAAPPLP--PSAPIAPPLPAGMPAAPPLPPAA 473
Query: 722 PXPPP 736
P PPP
Sbjct: 474 PAPPP 478
Score = 29.1 bits (62), Expect = 1.0
Identities = 37/163 (22%), Positives = 40/163 (24%)
Frame = +3
Query: 225 PPXPXPTXTPAPRXPXPXXXXRXRPPXXXXXXXXXXSQXPASPXPXXRXXXPPXXQGXXP 404
PP P P A P P R PP + P PP P
Sbjct: 338 PPPPPPRSNAAGSIPLP-PQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 405 XXVSXXPPPPKPXAXTPXRPVXALQXXXXXXXXXXXXXXXXXXFXPQDPPXXXRGPPRXX 584
+ PP + T PV P PP G P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPT---------PPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 585 XXXPPPXXXIXXPGPXTPRXXPXPXXPXKGXPPXRPRTXPXGP 713
PP I P P P P P PP P P P
Sbjct: 448 PL--PPSAPIAPPLPAGMPAAP-PLPPAAPAPPPAPAPAPAAP 487
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = +2
Query: 572 PPXXXAXPAPXRADPXAGXXNPPXXXXPXPPXQRPPPXXPX--HXPXGAPAXPXPPP 736
PP P A P PP P PP P P G PA P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 27.5 bits (58), Expect = 3.1
Identities = 45/196 (22%), Positives = 48/196 (24%), Gaps = 2/196 (1%)
Frame = +1
Query: 253 PXPVPPXXXPXXXXGPXXXXXXXXXXPPRXPPPXXPXPAXQXPXXXKXPPPXXXAXXHPP 432
P P PP P PP PPP A P PP A PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPP-PPPPPRSNAAGSIP----LPPQGRSAP--PP 363
Query: 433 PNPXXXPRXG-PXGXXXXXXXXXXXXXXXXRXXGXXXPKTPPXRXAXPPXXXRXXRPXXX 609
P P P G G P PP A R P
Sbjct: 364 PPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNA-----SRTSTPP-- 416
Query: 610 XSXGRXPXPPXXXP-AXXXXPKAXPXXAXAXXPGGPSXPRAATXXTXPXRXXXAXXPXPG 786
P PP P A P + P P P P +A A P P
Sbjct: 417 -----VPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Query: 787 SXXGXPDXPXXXXKPP 834
+ P P P
Sbjct: 472 AAPAPPPAPAPAPAAP 487
Score = 26.6 bits (56), Expect = 5.4
Identities = 23/90 (25%), Positives = 24/90 (26%), Gaps = 2/90 (2%)
Frame = +3
Query: 570 PPRXXXXX--PPPXXXIXXPGPXTPRXXPXPXXPXKGXPPXRPRTXPXGPQXPPXRHPXX 743
PPR P P P P PR P + PP P PP P
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTG---RQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 744 XAXAQXXSGXTXPREXPXXPRPXXXXXKTP 833
A A G P P P P
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSAP 428
Score = 26.2 bits (55), Expect = 7.1
Identities = 23/108 (21%), Positives = 26/108 (24%), Gaps = 2/108 (1%)
Frame = +3
Query: 156 PXXNRQXPXXXPXXXXGXPXXGXPPXPXPTXTPAPRXPXPXXXXRXRPPXXXXXXXXXXS 335
P R P P PP P P P R P S
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 336 QXPASPXPXXRXXXPPXXQGXXPXXVSXXPP--PPKPXAXTPXRPVXA 473
P P PP P + P PP P + P+ A
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPA 461
Score = 25.8 bits (54), Expect = 9.4
Identities = 14/54 (25%), Positives = 15/54 (27%)
Frame = +2
Query: 572 PPXXXAXPAPXRADPXAGXXNPPXXXXPXPPXQRPPPXXPXHXPXGAPAXPXPP 733
P A P P P P PP PP P +P P P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP 277
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.3 bits (70), Expect = 0.11
Identities = 24/70 (34%), Positives = 26/70 (37%)
Frame = -2
Query: 694 RGRXGGXPLXGXXGXGXXRGVXGPGXXIXXXGGGXXXXXRGGPRXXXGGSWGXKXXXGGG 515
RG GG G G RG G G GG RGG R GG G + GG
Sbjct: 8 RGGRGGSR-GGRGGFNGGRGGFGGGR------GGARGGGRGGARGGRGGRGGARGGRGGS 60
Query: 514 GXAXGGSWXG 485
GG+ G
Sbjct: 61 SGGRGGAKGG 70
Score = 30.3 bits (65), Expect = 0.44
Identities = 19/52 (36%), Positives = 20/52 (38%)
Frame = -2
Query: 577 RGGPRXXXGGSWGXKXXXGGGGXAXGGSWXGGXWRAXTGLXGVXAXGLGGGG 422
RGG GG G GG G GG+ GG A G G G GG
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 29.5 bits (63), Expect = 0.77
Identities = 28/76 (36%), Positives = 29/76 (38%)
Frame = -2
Query: 721 GXWGPXGXVRGRXGGXPLXGXXGXGXXRGVXGPGXXIXXXGGGXXXXXRGGPRXXXGGSW 542
G G G RG GG G G G RG G GG RGG R GGS
Sbjct: 6 GSRGGRGGSRGGRGGFN-GGRGGFGGGRGGARGGGRGGARGG---RGGRGGARGGRGGS- 60
Query: 541 GXKXXXGGGGXAXGGS 494
GG G A GG+
Sbjct: 61 -----SGGRGGAKGGA 71
Score = 27.1 bits (57), Expect = 4.1
Identities = 19/58 (32%), Positives = 21/58 (36%)
Frame = -2
Query: 601 GGGXXXXXRGGPRXXXGGSWGXKXXXGGGGXAXGGSWXGGXWRAXTGLXGVXAXGLGG 428
G G RGG GG G + GGG GG A G G + G GG
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG-SSGGRGG 66
Score = 26.6 bits (56), Expect = 5.4
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = -2
Query: 571 GPRXXXGGSWGXKXXXGGGGXAXGGSWXGGXWRAXTGLXGVXAXGLGGGGXXLTXXGXXP 392
G R GGS G + GG G + GG A G G G GG G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGG----RGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSS 61
Query: 391 XXXGG 377
GG
Sbjct: 62 GGRGG 66
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.11
Identities = 25/65 (38%), Positives = 25/65 (38%)
Frame = +2
Query: 542 PRPPPXAXRXPPXXXAXPAPXRADPXAGXXNPPXXXXPXPPXQRPPPXXPXHXPXGAPAX 721
P PPP A P PAP P A P P PP PPP P G P
Sbjct: 732 PPPPPPAVIVP---TPAPAPIPVPPPA-----PIMGGPPPP---PPP--PGVAGAGPPPP 778
Query: 722 PXPPP 736
P PPP
Sbjct: 779 PPPPP 783
Score = 29.1 bits (62), Expect = 1.0
Identities = 17/63 (26%), Positives = 19/63 (30%)
Frame = +3
Query: 594 PPPXXXIXXPGPXTPRXXPXPXXPXKGXPPXRPRTXPXGPQXPPXRHPXXXAXAQXXSGX 773
PPP + P P P P G PP P PP P A + S
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 774 TXP 782
P
Sbjct: 793 YAP 795
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/46 (32%), Positives = 15/46 (32%)
Frame = +1
Query: 334 PRXPPPXXPXPAXQXPXXXKXPPPXXXAXXHPPPNPXXXPRXGPXG 471
P P P PA PPP A PPP P P G
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 26.6 bits (56), Expect = 5.4
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +1
Query: 247 PXPXPVPPXXXPXXXXGPXXXXXXXXXXPPRXPPPXXPXPAXQXPXXXKXPPPXXXA 417
P P P P P PP PPP P A P PPP A
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPP--PPPPPPGVAGAGPPPPPPPPPAVSA 787
Score = 25.8 bits (54), Expect = 9.4
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 334 PRXPPPXXPXPAXQXPXXXKXPPPXXXAXXHPPPNP 441
P PPP P P PPP PPP P
Sbjct: 732 PPPPPPAVIVPT-PAPAPIPVPPPAPIMGGPPPPPP 766
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.19
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 653 PXPPXQRPPPXXPXHXPXGAPAXPXPP 733
P PP PPP P G P+ P PP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.5 bits (63), Expect = 0.77
Identities = 16/54 (29%), Positives = 18/54 (33%)
Frame = +3
Query: 570 PPRXXXXXPPPXXXIXXPGPXTPRXXPXPXXPXKGXPPXRPRTXPXGPQXPPXR 731
PP+ PPP P P P P P P PP P + P R
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAP---PMPAGPPSAPPPPLPASSAPSVPNPGDR 1749
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/38 (34%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Frame = +1
Query: 331 PPRXPPPXXPXPAXQXPXXXKXPP-PXXXAXXHPPPNP 441
PP+ P P P P PP P PPP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 4.1
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = +3
Query: 348 SPXPXXRXXXPPXXQGXXPXXVSXXPPPPKPXAXTPXRP 464
+P P PP P PPPP P + P P
Sbjct: 1706 TPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 26.6 bits (56), Expect = 5.4
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = +2
Query: 224 APPPXXXXHXRXPXPXXXXQXPXXAPXPPXTXPPPXLPXPRLPXTXXPRXKXP 382
A PP P P P P P PP P P LP + P P
Sbjct: 1697 AAPPQMSAPTPPPPPMSVPPPPSAPPMPAG---PPSAPPPPLPASSAPSVPNP 1746
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.1 bits (67), Expect = 0.25
Identities = 22/71 (30%), Positives = 25/71 (35%), Gaps = 2/71 (2%)
Frame = -2
Query: 571 GPRXXXGGSWGXKXXXGGGGX--AXGGSWXGGXWRAXTGLXGVXAXGLGGGGXXLTXXGX 398
GP+ G G G GG GGS G + G G G GGG + G
Sbjct: 123 GPKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGF 182
Query: 397 XPXXXGGFXXR 365
GGF R
Sbjct: 183 RGGSRGGFRGR 193
Score = 26.6 bits (56), Expect = 5.4
Identities = 21/70 (30%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Frame = -2
Query: 628 GPGXXIXXXGGGXXXXXRGGPRXXXGGS---WGXKXXXGGGGXAXGGSWXGGXWRAXTGL 458
GP G RGG R GGS +G G GG + GG G + G
Sbjct: 123 GPKKPKGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGF 182
Query: 457 XGVXAXGLGG 428
G G G
Sbjct: 183 RGGSRGGFRG 192
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.33
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +1
Query: 331 PPRXPPPXXPXPAXQXPXXXKXPPP 405
PP PPP P P + P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 9.4
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = +2
Query: 659 PPXQRPPPXXPXHXPXGAPAXPXPPP 736
PP PPP P + P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +2
Query: 551 PPXAXRXPPXXXAXPAPXRADPXAGXXNPPXXXXPXPPXQRPPPXXPXHXPXGAPAXPXP 730
PP P P P +P G PP P PPP P H G P P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEP--GEHMPPPPMHHEPGEHMPPP--PMHHEPGEHMPPPP 263
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +2
Query: 551 PPXAXRXPPXXXAXPAPXRADPXAGXXNPPXXXXPXPPXQRPPPXXPXHXPXGAPAXPXP 730
PP P P P +P G PP P PPP P H G P P
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEP--GEHMPPPPMHHEPGEHMPPP--PMHHEPGEHMPPPP 289
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +2
Query: 551 PPXAXRXPPXXXAXPAPXRADPXAGXXNPPXXXXPXPPXQRPPPXXPXHXPXGAPAXPXP 730
PP P P P +P G PP P PPP P H G P P
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEP--GEHMPPPPMHHEPGEHMPPP--PMHHEPGEHMPPPP 315
Score = 29.1 bits (62), Expect = 1.0
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = +2
Query: 551 PPXAXRXPPXXXAXPAPXRADPXAGXXNPPXXXXPXPPXQRPPPXXPXHXPXGAPAXPXP 730
PP P P P +P G PP P PPP P H G P P
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEP--GEHMPPPPMHHEPGEHMPPP--PMHHEPGEHMPPPP 341
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 28.3 bits (60), Expect = 1.8
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 296 APXPPXTXPPPXLPXPRLP 352
AP PP T PP +P P +P
Sbjct: 491 APLPPTTFAPPGVPLPPIP 509
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 2.3
Identities = 22/71 (30%), Positives = 22/71 (30%), Gaps = 8/71 (11%)
Frame = +2
Query: 548 PPPXAXRXPPXXXAXPAPXRADPXAGXXNPPXXXXPXPPXQRP------PPXXPXHXPXG 709
PPP P P P A A PP P P P PP P
Sbjct: 1010 PPPKQ----PANRVVPLPPTASQRASAYEPPTVSVPSPSALSPSVTPQLPPVSSRLPPVS 1065
Query: 710 A--PAXPXPPP 736
A P P PPP
Sbjct: 1066 ATRPQIPQPPP 1076
>SPBC19C7.05 |||cell wall organization protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 150
Score = 27.5 bits (58), Expect = 3.1
Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = +2
Query: 593 PAPXRADPXAGXXNPPXXXXPXPPXQ---RPPPXXPXHXPXGAPAXPXPPP 736
P P A+P A + P PP RPPP P P + PPP
Sbjct: 79 PPPYTAEPEARYNST--IHNPMPPMSQAYRPPPTEPPTVPAYETSSEFPPP 127
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect = 4.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1
Query: 331 PPRXPPPXXPXPAXQXPXXXKXPPPXXXAXXHPPPNP 441
PP PP PA P PPP PPP P
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPP-------PPPPP 197
Score = 25.8 bits (54), Expect = 9.4
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Frame = +2
Query: 587 AXPAPXRADPXAGXXNPPXXXXPXPPXQRPPPXXPXHXPXGAPAXP---XPPP 736
A AP +P A N P P PP P A + P PPP
Sbjct: 139 ASSAPASQEPSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPP 191
Score = 25.8 bits (54), Expect = 9.4
Identities = 16/61 (26%), Positives = 16/61 (26%), Gaps = 2/61 (3%)
Frame = +1
Query: 229 PXXXXXPXPXPVPPXXXPXXXXG--PXXXXXXXXXXPPRXPPPXXPXPAXQXPXXXKXPP 402
P P P P PP P P PP P A P PP
Sbjct: 184 PSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPP 243
Query: 403 P 405
P
Sbjct: 244 P 244
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +3
Query: 228 PXPXPTXTPAPRXPXPXXXXRXRPPXXXXXXXXXXSQXPA 347
P P TPAP P P + PP S PA
Sbjct: 721 PAIKPQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPPA 760
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.147 0.535
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,607,236
Number of Sequences: 5004
Number of extensions: 23262
Number of successful extensions: 268
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 511279616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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