Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_P15
         (982 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   1.1  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   8.0  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   8.0  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 15/34 (44%), Positives = 15/34 (44%)
 Frame = -3

Query: 704 AXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXG 603
           A GG   G   G  G   A GGS  GGG  G  G
Sbjct: 839 AGGGGAGGPLRGSSGG--AGGGSSGGGGSGGTSG 870



 Score = 25.8 bits (54), Expect = 2.0
 Identities = 18/53 (33%), Positives = 18/53 (33%)
 Frame = -3

Query: 758 GAGXRXRGGXXXXXTLXRAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXGA 600
           GAG    GG           GG   G   G  G     GG G  GG  G  GA
Sbjct: 533 GAGGMAGGGSDGPEYEGAGRGGVGSGIGGGGGG-----GGGGRAGGGVGATGA 580



 Score = 23.8 bits (49), Expect = 8.0
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -3

Query: 662 GXXXAXGGSGAGGGXXGXXGAV 597
           G     GG G GGG  G  G V
Sbjct: 294 GVGGGGGGGGGGGGGGGSAGPV 315



 Score = 23.8 bits (49), Expect = 8.0
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -3

Query: 713 LXRAXGGXXXGXXXGXXGXXXAXGGSGAG 627
           L  + GG   G   G  G   + GGSG G
Sbjct: 667 LAASLGGGAVGGGSGAGGGAGSSGGSGGG 695



 Score = 23.8 bits (49), Expect = 8.0
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 662 GXXXAXGGSGAGGGXXGXXGA 600
           G     GGSGAGGG     G+
Sbjct: 672 GGGAVGGGSGAGGGAGSSGGS 692


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.5
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 622 PPPAPXPPXAXXXPXXP 672
           PPPAP PP     P  P
Sbjct: 581 PPPAPPPPPPMGPPPSP 597


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -3

Query: 662 GXXXAXGGSGAGGGXXGXXGAV 597
           G     GG G GGG  G  G V
Sbjct: 294 GVGGGGGGGGGGGGGGGSAGPV 315


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.8 bits (49), Expect = 8.0
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = -3

Query: 662 GXXXAXGGSGAGGGXXGXXGAV 597
           G     GG G GGG  G  G V
Sbjct: 246 GVGGGGGGGGGGGGGGGSAGPV 267


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 511,778
Number of Sequences: 2352
Number of extensions: 7698
Number of successful extensions: 80
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 107296839
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)