Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_P15
(982 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.54
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.54
AF022978-8|AAG24176.1| 279|Caenorhabditis elegans Hypothetical ... 32 0.72
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 31 0.95
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF022978-10|AAG24180.2| 275|Caenorhabditis elegans Hypothetical... 31 1.3
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z73899-12|CAA98083.1| 284|Caenorhabditis elegans Hypothetical p... 31 1.7
Z73898-10|CAA98071.1| 284|Caenorhabditis elegans Hypothetical p... 31 1.7
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.7
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.7
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.7
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.7
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 31 1.7
Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical pr... 30 2.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 3.8
AC006677-7|AAF39944.1| 281|Caenorhabditis elegans Hypothetical ... 29 3.8
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z54269-2|CAA91019.1| 278|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical... 29 5.1
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 6.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 6.7
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 6.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 6.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 6.7
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 6.7
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 28 8.8
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 28 8.8
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 28 8.8
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 8.8
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.54
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = +1
Query: 613 PXXPPPAPXPPXAXXXPXXPXXXPXXXPPXALXSVXXXXXPPRXRSPAP 759
P PPP P P P P PP + PP R+P P
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP 310
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.54
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = +1
Query: 613 PXXPPPAPXPPXAXXXPXXPXXXPXXXPPXALXSVXXXXXPPRXRSPAP 759
P PPP P P P P PP + PP R+P P
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP 320
>AF022978-8|AAG24176.1| 279|Caenorhabditis elegans Hypothetical
protein T01G6.1 protein.
Length = 279
Score = 31.9 bits (69), Expect = 0.72
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 161 FAKEGADVAIVGRNVTKLDNVARECAXVGKKP 256
FAK GA V I GRN KL+ ++ V K P
Sbjct: 26 FAKNGAQVTITGRNAEKLEATKKKLLKVVKTP 57
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 31.5 bits (68), Expect = 0.95
Identities = 16/50 (32%), Positives = 18/50 (36%)
Frame = +1
Query: 604 PXXPXXPPPAPXPPXAXXXPXXPXXXPXXXPPXALXSVXXXXXPPRXRSP 753
P P P P P PP + P P PP A + PP SP
Sbjct: 82 PYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSP 131
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/54 (31%), Positives = 20/54 (37%)
Frame = -3
Query: 761 SGAGXRXRGGXXXXXTLXRAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXGA 600
+G+G GG A G G G G G G+GGG G GA
Sbjct: 28 AGSGIGSSGGWGGSDASAGASAGGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGA 81
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = -3
Query: 698 GGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXG 603
GG G G G GG+GAGG G G
Sbjct: 61 GGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGG 92
>AF022978-10|AAG24180.2| 275|Caenorhabditis elegans Hypothetical
protein T01G6.10 protein.
Length = 275
Score = 31.1 bits (67), Expect = 1.3
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Frame = +2
Query: 161 FAKEGADVAIVGRNVTKLDNVARECAXVGKKP---LIXKADXSXDXEAKXIVXXXIDAF 328
FAK GA V I GR+ KL+ ++ V K P + A+ + IV +DAF
Sbjct: 26 FAKYGAQVTITGRDAGKLEATKKKMLKVMKNPENVCVVVANLTDSDGQDEIVQSALDAF 84
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.7
Identities = 29/114 (25%), Positives = 29/114 (25%)
Frame = -3
Query: 944 GGGXXVXGXXXGGXXXEXAPXVXXXXXXXXGRXRXLXGXXXXSXGXXXVXXXPGXXAXXL 765
GGG G GG P G G G G
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGG 97
Query: 764 KSGAGXRXRGGXXXXXTLXRAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXG 603
G G GG A GG G G G GG G GGG G G
Sbjct: 98 GCGGGGGCGGGCAPPPP-PPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCG 150
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 698 GGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXG 603
GG G G G GG G GGG G G
Sbjct: 127 GGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGG 158
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 698 GGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXG 603
GG G G G GG G GGG G G
Sbjct: 134 GGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGG 165
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -3
Query: 758 GAGXRXRGGXXXXXTLXRAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXGAVVXKK 585
G G GG GG G G G GG GGG G G KK
Sbjct: 137 GGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGGGCGRKK 194
>Z73899-12|CAA98083.1| 284|Caenorhabditis elegans Hypothetical
protein ZK829.1 protein.
Length = 284
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 155 IHFAKEGADVAIVGRNVTKLDNVARECAXVGKKP 256
+ FA EGA + + GR+ ++ + C VG KP
Sbjct: 26 VKFAAEGAKIVLNGRSADDVEKTRKLCMEVGAKP 59
>Z73898-10|CAA98071.1| 284|Caenorhabditis elegans Hypothetical
protein ZK829.1 protein.
Length = 284
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +2
Query: 155 IHFAKEGADVAIVGRNVTKLDNVARECAXVGKKP 256
+ FA EGA + + GR+ ++ + C VG KP
Sbjct: 26 VKFAAEGAKIVLNGRSADDVEKTRKLCMEVGAKP 59
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 878 EPXXPXPXGXPPGXXXPXXXHPPGTAXAP 964
EP P P G P G P PPG A P
Sbjct: 181 EPGGPGPAGSPAGPSGPGPAGPPGPAGPP 209
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -3
Query: 737 GGXXXXXTLXRAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXGAVV 594
GG + GG G G G GG G GGG G G V
Sbjct: 136 GGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAV 183
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -3
Query: 758 GAGXRXRGGXXXXXTLXRAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXG 603
G G GG GG G G G GG G GGG G G
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCG 172
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 698 GGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXG 603
GG G G G GG G GGG G G
Sbjct: 95 GGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 126
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = -3
Query: 737 GGXXXXXTLXRAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXGAVV 594
GG + GG G G G GG G GGG G G V
Sbjct: 136 GGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAV 183
Score = 30.3 bits (65), Expect = 2.2
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -3
Query: 758 GAGXRXRGGXXXXXTLXRAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXG 603
G G GG GG G G G GG G GGG G G
Sbjct: 121 GGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCG 172
Score = 29.1 bits (62), Expect = 5.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 698 GGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXG 603
GG G G G GG G GGG G G
Sbjct: 95 GGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGG 126
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.7 bits (66), Expect = 1.7
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -3
Query: 758 GAGXRXRGGXXXXXTLXRAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXG 603
G G GG GG G G G GG G GGG G G
Sbjct: 58 GGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGG 109
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = -3
Query: 707 RAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXG 603
R+ G G G G GGSG GGG G G
Sbjct: 39 RSGGWGRPGWGGGGPGWGRGGGGSGWGGGRGGGWG 73
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 622 PPPAPXPPXAXXXPXXPXXXPXXXPPXAL 708
PPP P PP A P P PP AL
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPPPPPPAL 525
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.7 bits (66), Expect = 1.7
Identities = 23/85 (27%), Positives = 24/85 (28%)
Frame = -3
Query: 761 SGAGXRXRGGXXXXXTLXRAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXGAVVXKKX 582
+G G R GG GG G G GG G G G G G
Sbjct: 91 NGGGGRGGGGRGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPG 150
Query: 581 KNXXXXXXXXXXXXXGXXGXRGSGG 507
N G G RG GG
Sbjct: 151 SNGGGDWGGNGGGGRGGGGGRGGGG 175
Score = 29.9 bits (64), Expect = 2.9
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = -3
Query: 758 GAGXRXRGGXXXXXTLXRAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXG 603
G G GG GG G G G GG G GGG G G
Sbjct: 54 GGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGGRGDWG 105
Score = 29.9 bits (64), Expect = 2.9
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -3
Query: 761 SGAGXRXRGGXXXXXTLXRAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXG 603
+G G RGG R G G G G GG G GGG G G
Sbjct: 129 NGGGGGGRGGGGRGGD-GRGPPGSNGGGDWGGNGGGGRGGGGGRGGGGGGGAG 180
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +1
Query: 583 FFXSTTAPXXPXXPPPAPXPPXAXXXPXXPXXXPXXXPPXALXSVXXXXXPP 738
F S ++ P PPP P PP P P P A V PP
Sbjct: 1328 FSTSRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPP 1379
>Z73973-2|CAA98264.1| 277|Caenorhabditis elegans Hypothetical
protein F25D1.5 protein.
Length = 277
Score = 30.3 bits (65), Expect = 2.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 161 FAKEGADVAIVGRNVTKLDNVARECAXVG 247
FAKEGA V I GRN +L+ ++ G
Sbjct: 26 FAKEGAQVTITGRNEDRLEETKQQILKAG 54
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = +1
Query: 604 PXXPXXPPPAPXPPXAXXXPXXPXXXPXXXPPXALXSVXXXXXPPRXRSPAP 759
P P PPP PP P P P PP + PP P P
Sbjct: 28 PPCPPPPPPMCAPP-PLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
>AC006677-7|AAF39944.1| 281|Caenorhabditis elegans Hypothetical
protein R05D8.9 protein.
Length = 281
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 161 FAKEGADVAIVGRNVTKLDNVARECAXVG 247
FAK+GA V + GRN +L+ +E G
Sbjct: 27 FAKDGAKVTVTGRNAERLEETRQEILKSG 55
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 29.1 bits (62), Expect = 5.1
Identities = 17/50 (34%), Positives = 17/50 (34%)
Frame = -3
Query: 752 GXRXRGGXXXXXTLXRAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXG 603
G RGG R G G G G GGSG GG G G
Sbjct: 810 GYGGRGGGFGGTGRGRGGGVFGGGGRGGDFGGSGNFGGSGGGGSFGGSGG 859
>Z54269-2|CAA91019.1| 278|Caenorhabditis elegans Hypothetical
protein F02C12.2 protein.
Length = 278
Score = 29.1 bits (62), Expect = 5.1
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Frame = +2
Query: 161 FAKEGADVAIVGRNVTKLDNVARECAXVGKKP---LIXKADXSXDXEAKXIVXXXIDAF 328
FAKEGA V + GR+ KL+ + G K LI AD + ++ + F
Sbjct: 27 FAKEGAKVTVTGRSEEKLEETKKALLDAGIKESNFLIVPADITFSTGQDELISQTLKKF 85
>AF003135-11|AAK18987.2| 1406|Caenorhabditis elegans Hypothetical
protein W03F11.4 protein.
Length = 1406
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +1
Query: 592 STTAPXXPXXPPPAPXPP 645
ST P P PPPAP PP
Sbjct: 823 STLPPPPPPNPPPAPQPP 840
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/55 (34%), Positives = 22/55 (40%)
Frame = -3
Query: 764 KSGAGXRXRGGXXXXXTLXRAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXGA 600
+ G G RGG + R GG G G G GG G GGG G G+
Sbjct: 21 RGGYGGGGRGGGGGGYSGGRG-GGYGGGGGGGYGGG--GYGGGGRGGGRGGSNGS 72
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 625 PPAPXPPXAXXXPXXPXXXPXXXPPXALXSVXXXXXPPRXRSPAP 759
PPAP PP P P PP L V PP P P
Sbjct: 215 PPAPPPPIGGIAPVNAHGAP---PPPPLPPVGAGAPPPPPPPPPP 256
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/54 (29%), Positives = 16/54 (29%), Gaps = 1/54 (1%)
Frame = +1
Query: 604 PXXPXXPPPAPXPPXAXXX-PXXPXXXPXXXPPXALXSVXXXXXPPRXRSPAPD 762
P P PP PP P P P P PP R P PD
Sbjct: 1281 PLQPPPPPQMTGPPIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPPD 1334
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 625 PPAPXPPXAXXXPXXPXXXPXXXPPXALXSVXXXXXPPRXRSPAP 759
PPAP PP P P PP L V PP P P
Sbjct: 201 PPAPPPPIGGIAPVNAHGAP---PPPPLPPVGAGAPPPPPPPPPP 242
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 625 PPAPXPPXAXXXPXXPXXXPXXXPPXALXSVXXXXXPPRXRSPAP 759
PPAP PP P P PP L V PP P P
Sbjct: 201 PPAPPPPIGGIAPVNAHGAP---PPPPLPPVGAGAPPPPPPPPPP 242
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 28.7 bits (61), Expect = 6.7
Identities = 16/54 (29%), Positives = 16/54 (29%), Gaps = 1/54 (1%)
Frame = +1
Query: 604 PXXPXXPPPAPXPPXAXXX-PXXPXXXPXXXPPXALXSVXXXXXPPRXRSPAPD 762
P P PP PP P P P P PP R P PD
Sbjct: 1281 PLQPPPPPQMTGPPIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPPD 1334
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 622 PPPAPXPPXAXXXPXXPXXXPXXXPPXAL 708
P PAP PP P P P PP +
Sbjct: 767 PRPAPAPPGGRQAPMPPRGGPGAPPPPGM 795
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 622 PPPAPXPPXAXXXPXXPXXXPXXXPPXAL 708
P PAP PP P P P PP +
Sbjct: 767 PRPAPAPPGGRQAPMPPRGGPGAPPPPGM 795
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 622 PPPAPXPPXAXXXPXXPXXXPXXXPPXAL 708
P PAP PP P P P PP +
Sbjct: 767 PRPAPAPPGGRQAPMPPRGGPGAPPPPGM 795
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.3 bits (60), Expect = 8.8
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 622 PPPAPXPPXAXXXPXXPXXXPXXXPPXAL 708
P PAP PP P P P PP +
Sbjct: 767 PRPAPAPPGGRQAPMPPRGGPGAPPPPGM 795
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 8.8
Identities = 16/52 (30%), Positives = 17/52 (32%)
Frame = -3
Query: 758 GAGXRXRGGXXXXXTLXRAXGGXXXGXXXGXXGXXXAXGGSGAGGGXXGXXG 603
G G GG + GG G G G GG GGG G G
Sbjct: 134 GGGYGGMGGGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGG 185
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,394,543
Number of Sequences: 27780
Number of extensions: 203861
Number of successful extensions: 1882
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1525
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2552786072
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -