Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_P14
(959 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.006
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.006
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.006
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.17
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.17
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.17
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.23
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.30
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 33 0.30
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 30 2.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 30 2.1
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.1
Z99270-3|CAL64001.1| 98|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z82258-5|CAL63989.1| 98|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.7
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 3.7
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 3.7
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 3.7
AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical ... 29 4.9
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 4.9
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 4.9
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 6.5
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 6.5
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 6.5
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 6.5
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 6.5
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 8.6
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 8.6
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 28 8.6
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 28 8.6
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 8.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/80 (30%), Positives = 24/80 (30%)
Frame = +1
Query: 547 PXXRGPPXPXXXXXXXXGGXGPXXXGXXXXXXAXXXPPPGGXGPPXXXXXXXGGPPPXGG 726
P GPP P G P G PPP G P PPP GG
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 727 XXPXXGXXXXXXXXPGGPPP 786
P GGPPP
Sbjct: 768 CPPPP-PPPPPGGFKGGPPP 786
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 4/66 (6%)
Frame = -1
Query: 782 GGPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXG----GPXPPGGGXXXAXXXXXXPXX 615
GG P P G PP GGPP G P PP GG P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM 792
Query: 614 XGPXPP 597
P P
Sbjct: 793 FAPMAP 798
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/76 (32%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Frame = -1
Query: 782 GGPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPGGGXXXAXXXXXXPXXXGPX 603
GGPP P G PP GGPP P PPGG + P G
Sbjct: 724 GGPP-------PPPPPGGLPPITGGPPP--------PPPPGGLPPISGGPPPPPPPPGGC 768
Query: 602 PPXXXXXXXXG-XGGP 558
PP G GGP
Sbjct: 769 PPPPPPPPPGGFKGGP 784
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -2
Query: 532 PGGXXXXXXXXXXPPPXXXXGEXAXXPXPGXPPPXGXP 419
PGG PPP + P P PPP G P
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = -1
Query: 785 GGGPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPGGGXXXAXXXXXXPXXXGP 606
GG PP P G P GG PP P PPGG GP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPP--------PPPPGGCPPPPPPPPPGGFKGGP 784
Query: 605 XPP 597
PP
Sbjct: 785 PPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/80 (30%), Positives = 24/80 (30%)
Frame = +1
Query: 547 PXXRGPPXPXXXXXXXXGGXGPXXXGXXXXXXAXXXPPPGGXGPPXXXXXXXGGPPPXGG 726
P GPP P G P G PPP G P PPP GG
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 727 XXPXXGXXXXXXXXPGGPPP 786
P GGPPP
Sbjct: 768 CPPPP-PPPPPGGFKGGPPP 786
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 4/66 (6%)
Frame = -1
Query: 782 GGPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXG----GPXPPGGGXXXAXXXXXXPXX 615
GG P P G PP GGPP G P PP GG P
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM 792
Query: 614 XGPXPP 597
P P
Sbjct: 793 FAPMAP 798
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/76 (32%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Frame = -1
Query: 782 GGPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPGGGXXXAXXXXXXPXXXGPX 603
GGPP P G PP GGPP P PPGG + P G
Sbjct: 724 GGPP-------PPPPPGGLPPITGGPPP--------PPPPGGLPPISGGPPPPPPPPGGC 768
Query: 602 PPXXXXXXXXG-XGGP 558
PP G GGP
Sbjct: 769 PPPPPPPPPGGFKGGP 784
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -2
Query: 532 PGGXXXXXXXXXXPPPXXXXGEXAXXPXPGXPPPXGXP 419
PGG PPP + P P PPP G P
Sbjct: 732 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = -1
Query: 785 GGGPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPGGGXXXAXXXXXXPXXXGP 606
GG PP P G P GG PP P PPGG GP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPP--------PPPPGGCPPPPPPPPPGGFKGGP 784
Query: 605 XPP 597
PP
Sbjct: 785 PPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/80 (30%), Positives = 24/80 (30%)
Frame = +1
Query: 547 PXXRGPPXPXXXXXXXXGGXGPXXXGXXXXXXAXXXPPPGGXGPPXXXXXXXGGPPPXGG 726
P GPP P G P G PPP G P PPP GG
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 727 XXPXXGXXXXXXXXPGGPPP 786
P GGPPP
Sbjct: 351 CPPPP-PPPPPGGFKGGPPP 369
Score = 32.7 bits (71), Expect = 0.40
Identities = 20/66 (30%), Positives = 20/66 (30%), Gaps = 4/66 (6%)
Frame = -1
Query: 782 GGPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXG----GPXPPGGGXXXAXXXXXXPXX 615
GG P P G PP GGPP G P PP GG P
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGM 375
Query: 614 XGPXPP 597
P P
Sbjct: 376 FAPMAP 381
Score = 31.1 bits (67), Expect = 1.2
Identities = 25/76 (32%), Positives = 26/76 (34%), Gaps = 1/76 (1%)
Frame = -1
Query: 782 GGPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPGGGXXXAXXXXXXPXXXGPX 603
GGPP P G PP GGPP P PPGG + P G
Sbjct: 307 GGPP-------PPPPPGGLPPITGGPPP--------PPPPGGLPPISGGPPPPPPPPGGC 351
Query: 602 PPXXXXXXXXG-XGGP 558
PP G GGP
Sbjct: 352 PPPPPPPPPGGFKGGP 367
Score = 29.5 bits (63), Expect = 3.7
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = -2
Query: 532 PGGXXXXXXXXXXPPPXXXXGEXAXXPXPGXPPPXGXP 419
PGG PPP + P P PPP G P
Sbjct: 315 PGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/63 (31%), Positives = 20/63 (31%)
Frame = -1
Query: 785 GGGPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPGGGXXXAXXXXXXPXXXGP 606
GG PP P G P GG PP P PPGG GP
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPP--------PPPPGGCPPPPPPPPPGGFKGGP 367
Query: 605 XPP 597
PP
Sbjct: 368 PPP 370
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.17
Identities = 27/114 (23%), Positives = 29/114 (25%), Gaps = 5/114 (4%)
Frame = -2
Query: 745 PPXXGXXPXXGGGXXXXXXXXXGAPPPRGGGXXXP--XXXXGXPXXXAPXXP---XXXXX 581
PP G P G G PPPR G P P +P P
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Query: 580 XXXXGGXPXXXXXXXXPGGXXXXXXXXXXPPPXXXXGEXAXXPXPGXPPPXGXP 419
G P GG PPP + P PP G P
Sbjct: 301 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 354
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +1
Query: 610 PXXXGXXXXXXAXXXPPPGGXGPPXXXXXXXGGPPPXGGXXPXXGXXXXXXXXPGGPPP 786
P G + PPP G P PPP G P G PPP
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
Score = 31.5 bits (68), Expect = 0.93
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = +1
Query: 562 PPXPXXXXXXXXGGXGPXXXGXXXXXXAXXXPPPGGXGPPXXXXXXXGGPPPXGGXXPXX 741
PP G P G A PPP G P G PP G P
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS-PPTGSLPPPQ 316
Query: 742 GXXXXXXXXPGGPPP 786
G PPP
Sbjct: 317 AGGSPPPAGTGSPPP 331
Score = 29.5 bits (63), Expect = 3.7
Identities = 28/123 (22%), Positives = 29/123 (23%)
Frame = -2
Query: 787 AGGXPXXXXXXXXXPPXXGXXPXXGGGXXXXXXXXXGAPPPRGGGXXXPXXXXGXPXXXA 608
+G P PP G P G PPPR G P G P
Sbjct: 252 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP---- 307
Query: 607 PXXPXXXXXXXXXGGXPXXXXXXXXPGGXXXXXXXXXXPPPXXXXGEXAXXPXPGXPPPX 428
P GG P P PP G P PP
Sbjct: 308 ---PTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPP---TGSPPTGSPPTGRPPR 361
Query: 427 GXP 419
G P
Sbjct: 362 GGP 364
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 655 PPPGGXGPPXXXXXXXGGPPPXGGXXPXXGXXXXXXXXPGGPPP 786
PPP G P PPP G P G PPP
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.17
Identities = 27/114 (23%), Positives = 29/114 (25%), Gaps = 5/114 (4%)
Frame = -2
Query: 745 PPXXGXXPXXGGGXXXXXXXXXGAPPPRGGGXXXP--XXXXGXPXXXAPXXP---XXXXX 581
PP G P G G PPPR G P P +P P
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Query: 580 XXXXGGXPXXXXXXXXPGGXXXXXXXXXXPPPXXXXGEXAXXPXPGXPPPXGXP 419
G P GG PPP + P PP G P
Sbjct: 322 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 375
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +1
Query: 610 PXXXGXXXXXXAXXXPPPGGXGPPXXXXXXXGGPPPXGGXXPXXGXXXXXXXXPGGPPP 786
P G + PPP G P PPP G P G PPP
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
Score = 31.5 bits (68), Expect = 0.93
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = +1
Query: 562 PPXPXXXXXXXXGGXGPXXXGXXXXXXAXXXPPPGGXGPPXXXXXXXGGPPPXGGXXPXX 741
PP G P G A PPP G P G PP G P
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS-PPTGSLPPPQ 337
Query: 742 GXXXXXXXXPGGPPP 786
G PPP
Sbjct: 338 AGGSPPPAGTGSPPP 352
Score = 29.5 bits (63), Expect = 3.7
Identities = 28/123 (22%), Positives = 29/123 (23%)
Frame = -2
Query: 787 AGGXPXXXXXXXXXPPXXGXXPXXGGGXXXXXXXXXGAPPPRGGGXXXPXXXXGXPXXXA 608
+G P PP G P G PPPR G P G P
Sbjct: 273 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP---- 328
Query: 607 PXXPXXXXXXXXXGGXPXXXXXXXXPGGXXXXXXXXXXPPPXXXXGEXAXXPXPGXPPPX 428
P GG P P PP G P PP
Sbjct: 329 ---PTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPP---TGSPPTGSPPTGRPPR 382
Query: 427 GXP 419
G P
Sbjct: 383 GGP 385
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 655 PPPGGXGPPXXXXXXXGGPPPXGGXXPXXGXXXXXXXXPGGPPP 786
PPP G P PPP G P G PPP
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.17
Identities = 27/114 (23%), Positives = 29/114 (25%), Gaps = 5/114 (4%)
Frame = -2
Query: 745 PPXXGXXPXXGGGXXXXXXXXXGAPPPRGGGXXXP--XXXXGXPXXXAPXXP---XXXXX 581
PP G P G G PPPR G P P +P P
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Query: 580 XXXXGGXPXXXXXXXXPGGXXXXXXXXXXPPPXXXXGEXAXXPXPGXPPPXGXP 419
G P GG PPP + P PP G P
Sbjct: 307 PPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 360
Score = 31.5 bits (68), Expect = 0.93
Identities = 16/59 (27%), Positives = 17/59 (28%)
Frame = +1
Query: 610 PXXXGXXXXXXAXXXPPPGGXGPPXXXXXXXGGPPPXGGXXPXXGXXXXXXXXPGGPPP 786
P G + PPP G P PPP G P G PPP
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
Score = 31.5 bits (68), Expect = 0.93
Identities = 20/75 (26%), Positives = 20/75 (26%)
Frame = +1
Query: 562 PPXPXXXXXXXXGGXGPXXXGXXXXXXAXXXPPPGGXGPPXXXXXXXGGPPPXGGXXPXX 741
PP G P G A PPP G P G PP G P
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS-PPTGSLPPPQ 322
Query: 742 GXXXXXXXXPGGPPP 786
G PPP
Sbjct: 323 AGGSPPPAGTGSPPP 337
Score = 29.5 bits (63), Expect = 3.7
Identities = 28/123 (22%), Positives = 29/123 (23%)
Frame = -2
Query: 787 AGGXPXXXXXXXXXPPXXGXXPXXGGGXXXXXXXXXGAPPPRGGGXXXPXXXXGXPXXXA 608
+G P PP G P G PPPR G P G P
Sbjct: 258 SGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP---- 313
Query: 607 PXXPXXXXXXXXXGGXPXXXXXXXXPGGXXXXXXXXXXPPPXXXXGEXAXXPXPGXPPPX 428
P GG P P PP G P PP
Sbjct: 314 ---PTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPP---TGSPPTGSPPTGRPPR 367
Query: 427 GXP 419
G P
Sbjct: 368 GGP 370
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 655 PPPGGXGPPXXXXXXXGGPPPXGGXXPXXGXXXXXXXXPGGPPP 786
PPP G P PPP G P G PPP
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.23
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Frame = +1
Query: 655 PPPGGXGPPXXXXXXXGGP----PPXGGXXPXXGXXXXXXXXPGGPPP 786
PPPGG G P GGP PP G G G PPP
Sbjct: 412 PPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 5/65 (7%)
Frame = +1
Query: 556 RGPPXPXXXXXXXXGGXG-PXXXGXXXXXXAXXXPPP----GGXGPPXXXXXXXGGPPPX 720
+GP P GG G P G PPP G GPP G PPP
Sbjct: 401 QGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPPG 460
Query: 721 GGXXP 735
P
Sbjct: 461 AAGAP 465
Score = 29.5 bits (63), Expect = 3.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 664 GGXGPPXXXXXXXGGPPPXGGXXPXXGXXXXXXXXPGGPPP 786
GG PP G PPP G P G P G PP
Sbjct: 306 GGYAPPQQQQQQFGAPPPQGA--PQQGFGAPPQGPPQGGPP 344
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/58 (29%), Positives = 17/58 (29%)
Frame = -1
Query: 773 PGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPGGGXXXAXXXXXXPXXXGPXP 600
PG P G P GPP G P PPGG P P P
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFG-PPPPGGPGAYGPPPTGFPPVGAPPP 459
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/80 (25%), Positives = 20/80 (25%)
Frame = -1
Query: 785 GGGPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPGGGXXXAXXXXXXPXXXGP 606
G PP P PP PP GP PGG P GP
Sbjct: 366 GPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGP 425
Query: 605 XPPXXXXXXXXGXGGPRXXG 546
GGP G
Sbjct: 426 PQGGPGGFGPPPPGGPGAYG 445
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.1 bits (72), Expect = 0.30
Identities = 23/79 (29%), Positives = 23/79 (29%), Gaps = 4/79 (5%)
Frame = -1
Query: 782 GGPPGXXXXXXXXPXXGXXPPXG--GGPPXXXXXXXGGP--XPPGGGXXXAXXXXXXPXX 615
GGPPG P G P G G PP P PP GG P
Sbjct: 164 GGPPGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPS 223
Query: 614 XGPXPPXXXXXXXXGXGGP 558
GP P G P
Sbjct: 224 GGPPGPFNPSGAPPSGGPP 242
Score = 33.1 bits (72), Expect = 0.30
Identities = 29/105 (27%), Positives = 30/105 (28%), Gaps = 8/105 (7%)
Frame = -2
Query: 679 GAPPPRGGGXXXPXXXXGXPXXXAPXXPXXXXXXXXXGGXPXXXXXXXXP--GGXXXXXX 506
GAPP GG P G P P P GG P P GG
Sbjct: 429 GAPP--SGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFD 486
Query: 505 XXXXPPPXXXXG--EXAXXPXPGXPP----PXGXPXXXXXXXPXP 389
PP G + P G PP P G P P P
Sbjct: 487 PSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGMPPVPLP 531
Score = 31.5 bits (68), Expect = 0.93
Identities = 27/95 (28%), Positives = 29/95 (30%), Gaps = 8/95 (8%)
Frame = -2
Query: 679 GAPPPRGGGXXXPXXXXGXPXXXAPXXPXXXXXXXXXGGXPXXXXXXXXP--GGXXXXXX 506
GAPP GG P G P P P GG P P GG
Sbjct: 324 GAPP--SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFD 381
Query: 505 XXXXPPPXXXXG--EXAXXPXPGXPP----PXGXP 419
PP G + + P G PP P G P
Sbjct: 382 PSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAP 416
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/89 (28%), Positives = 25/89 (28%), Gaps = 2/89 (2%)
Frame = -2
Query: 679 GAPPPRGGGXXXPXXXXGXPXXXAPXXPXXXXXXXXXGGXPXXXXXXXXP--GGXXXXXX 506
GAPP GG P G P P P GG P P GG
Sbjct: 384 GAPP--SGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFN 441
Query: 505 XXXXPPPXXXXGEXAXXPXPGXPPPXGXP 419
PP G P PP G P
Sbjct: 442 PSGAPPSGGPPGPF----NPSGAPPSGGP 466
Score = 29.5 bits (63), Expect = 3.7
Identities = 24/88 (27%), Positives = 24/88 (27%), Gaps = 1/88 (1%)
Frame = -2
Query: 679 GAPPPRGGGXXXPXXXXGXPXXXAPXXPXXXXXXXXXGGXP-XXXXXXXXPGGXXXXXXX 503
GAPP GG P G P P P GG P P G
Sbjct: 264 GAPP--SGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFN 321
Query: 502 XXXPPPXXXXGEXAXXPXPGXPPPXGXP 419
PP G G PP G P
Sbjct: 322 PSGAPP--SGGPPGPFDPSGAPPSGGPP 347
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/91 (26%), Positives = 26/91 (28%), Gaps = 8/91 (8%)
Frame = -2
Query: 667 PRGGGXXXPXXXXGXPXXXAPXXPXXXXXXXXXGGXPXXXXXXXXP--GGXXXXXXXXXX 494
P GG P G P P P GG P P GG
Sbjct: 206 PPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGA 265
Query: 493 PPPXXXXG--EXAXXPXPGXPP----PXGXP 419
PP G + + P G PP P G P
Sbjct: 266 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAP 296
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 664 GGXGPPXXXXXXXGGPPPXGGXXPXXGXXXXXXXXP-GGPPP 786
GG PP G PP GG P G P GGPPP
Sbjct: 1571 GGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPP 1612
Score = 31.9 bits (69), Expect = 0.70
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = -1
Query: 782 GGPP---GXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPP 663
GGPP G P G PP G PP GGP PP
Sbjct: 1571 GGPPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
Score = 31.5 bits (68), Expect = 0.93
Identities = 23/83 (27%), Positives = 23/83 (27%)
Frame = +1
Query: 487 GGGXXXXXXXXXXPXXXXXXPXXRGPPXPXXXXXXXXGGXGPXXXGXXXXXXAXXXPPPG 666
GGG P G P P GG P G PPP
Sbjct: 1534 GGGPGMGPSQYYHDSPQNRGPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQG-----PPPL 1588
Query: 667 GXGPPXXXXXXXGGPPPXGGXXP 735
GPP GPPP G P
Sbjct: 1589 MGGPPPRLGMPPPGPPPPNGGPP 1611
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -1
Query: 785 GGGPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPGGG 654
GG PP P PP GGPP GP PP GG
Sbjct: 1571 GGPPPPRGGSHCQGP-----PPLMGGPPPRLGMPPPGPPPPNGG 1609
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 6/50 (12%)
Frame = +1
Query: 655 PPP--GGXGPPXXXXXXXGGPPPXGGXXPXXG----XXXXXXXXPGGPPP 786
PPP GG G P GGPP GG G GGPPP
Sbjct: 154 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPP 203
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 782 GGPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPGG 657
GGPPG G P G G GGP PGG
Sbjct: 172 GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGG 213
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.3 bits (65), Expect = 2.1
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 6/50 (12%)
Frame = +1
Query: 655 PPP--GGXGPPXXXXXXXGGPPPXGGXXPXXG----XXXXXXXXPGGPPP 786
PPP GG G P GGPP GG G GGPPP
Sbjct: 434 PPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPP 483
Score = 29.1 bits (62), Expect = 4.9
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -1
Query: 782 GGPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPGG 657
GGPPG G P G G GGP PGG
Sbjct: 452 GGPPGHGGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGG 493
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 2.1
Identities = 22/76 (28%), Positives = 22/76 (28%)
Frame = +1
Query: 559 GPPXPXXXXXXXXGGXGPXXXGXXXXXXAXXXPPPGGXGPPXXXXXXXGGPPPXGGXXPX 738
GPP P P G A PPPG GPP G P G
Sbjct: 181 GPPGPPGPDGNAGPAGAPGVPGPDGD--AGSPPPPGPPGPPGPPGND-GQPGAPGQDGQP 237
Query: 739 XGXXXXXXXXPGGPPP 786
PGGP P
Sbjct: 238 GAPGTNTVNSPGGPGP 253
Score = 28.7 bits (61), Expect = 6.5
Identities = 22/86 (25%), Positives = 22/86 (25%)
Frame = +1
Query: 526 PXXXXXXPXXRGPPXPXXXXXXXXGGXGPXXXGXXXXXXAXXXPPPGGXGPPXXXXXXXG 705
P P GPP P P G PGG GP
Sbjct: 203 PDGDAGSPPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPGPAGPP----- 257
Query: 706 GPPPXGGXXPXXGXXXXXXXXPGGPP 783
GPP G G P GPP
Sbjct: 258 GPPGPPGQDGSGGAAQPGPPGPPGPP 283
Score = 23.4 bits (48), Expect(2) = 9.7
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = -1
Query: 680 GGPXPPGGGXXXAXXXXXXPXXXGPXPPXXXXXXXXGXGGPRXXG 546
G P PPG P GP P G G P G
Sbjct: 255 GPPGPPGPPGQDGSGGAAQPGPPGPPGPPGNDGQPGGPGQPGGPG 299
Score = 23.0 bits (47), Expect(2) = 9.7
Identities = 12/40 (30%), Positives = 12/40 (30%)
Frame = -1
Query: 779 GPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPG 660
GPPG G P G G P PPG
Sbjct: 184 GPPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPPG 223
>Z99270-3|CAL64001.1| 98|Caenorhabditis elegans Hypothetical
protein Y37A1A.4 protein.
Length = 98
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 235 QXKEQLRRGCSLXXLGPXRXCY 300
Q +++LRRG SL +GP R C+
Sbjct: 28 QFRDKLRRGVSLENIGPQRVCF 49
>Z82258-5|CAL63989.1| 98|Caenorhabditis elegans Hypothetical
protein Y37A1A.4 protein.
Length = 98
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 235 QXKEQLRRGCSLXXLGPXRXCY 300
Q +++LRRG SL +GP R C+
Sbjct: 28 QFRDKLRRGVSLENIGPQRVCF 49
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/78 (24%), Positives = 19/78 (24%)
Frame = -1
Query: 779 GPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPGGGXXXAXXXXXXPXXXGPXP 600
GPPG P G P G P PGG P GP
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAG 224
Query: 599 PXXXXXXXXGXGGPRXXG 546
P G P G
Sbjct: 225 PPGPAGPAGNDGAPGTGG 242
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.7
Identities = 28/122 (22%), Positives = 28/122 (22%), Gaps = 4/122 (3%)
Frame = +1
Query: 430 GGAXXXXXGXXXXPPXXXXGGGXXXXXXXXXXPXXXXXXPXXRGPPX----PXXXXXXXX 597
GG G GGG P P G P P
Sbjct: 89 GGGGYGAGGGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGKPGTPGKPGAPGNPGASGK 148
Query: 598 GGXGPXXXGXXXXXXAXXXPPPGGXGPPXXXXXXXGGPPPXGGXXPXXGXXXXXXXXPGG 777
G P PPG GP GGP P G G P G
Sbjct: 149 GAAAPCEPSTPPPCQPCPAGPPGPPGPDGTPGEP-GGPGPAGSPAGPSGPGPAGPPGPAG 207
Query: 778 PP 783
PP
Sbjct: 208 PP 209
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/78 (24%), Positives = 19/78 (24%)
Frame = -1
Query: 779 GPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPGGGXXXAXXXXXXPXXXGPXP 600
GPPG P G P G P PGG P GP
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAG 224
Query: 599 PXXXXXXXXGXGGPRXXG 546
P G P G
Sbjct: 225 PPGPAGPAGNDGAPGTGG 242
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/78 (24%), Positives = 19/78 (24%)
Frame = -1
Query: 779 GPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPGGGXXXAXXXXXXPXXXGPXP 600
GPPG P G P G P PGG P GP
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAG 224
Query: 599 PXXXXXXXXGXGGPRXXG 546
P G P G
Sbjct: 225 PPGPAGPAGNDGAPGTGG 242
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.5 bits (63), Expect = 3.7
Identities = 19/78 (24%), Positives = 19/78 (24%)
Frame = -1
Query: 779 GPPGXXXXXXXXPXXGXXPPXGGGPPXXXXXXXGGPXPPGGGXXXAXXXXXXPXXXGPXP 600
GPPG P G P G P PGG P GP
Sbjct: 165 GPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAG 224
Query: 599 PXXXXXXXXGXGGPRXXG 546
P G P G
Sbjct: 225 PPGPAGPAGNDGAPGTGG 242
>AL117203-5|CAB55107.1| 291|Caenorhabditis elegans Hypothetical
protein Y48C3A.8 protein.
Length = 291
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 703 GGPPPXGGXXPXXGXXXXXXXXPGGPPP 786
GGPPP GG P G P G P
Sbjct: 11 GGPPPGGGAQPFPGASGSGGMMPNGAHP 38
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +1
Query: 643 AXXXPPPGGXGPPXXXXXXX--GGPPPXG 723
A PP GG GPP GGPPP G
Sbjct: 669 AHYGPPGGGQGPPPPPQGQQYYGGPPPPG 697
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +1
Query: 643 AXXXPPPGGXGPPXXXXXXX--GGPPPXG 723
A PP GG GPP GGPPP G
Sbjct: 669 AHYGPPGGGQGPPPPPQGQQYYGGPPPPG 697
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.5
Identities = 25/87 (28%), Positives = 25/87 (28%), Gaps = 8/87 (9%)
Frame = +1
Query: 547 PXXRGPPXPXXXXXXXX--GGXGPXXXGXXXXXXAXXXP----PPGGXGPP--XXXXXXX 702
P RGPP P G G A P PPG GPP
Sbjct: 185 PGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPP 244
Query: 703 GGPPPXGGXXPXXGXXXXXXXXPGGPP 783
G P P G P P GPP
Sbjct: 245 GPPGPKGAPGPDGPPGVDGQSGPPGPP 271
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 28.7 bits (61), Expect = 6.5
Identities = 25/87 (28%), Positives = 25/87 (28%), Gaps = 8/87 (9%)
Frame = +1
Query: 547 PXXRGPPXPXXXXXXXX--GGXGPXXXGXXXXXXAXXXP----PPGGXGPP--XXXXXXX 702
P RGPP P G G A P PPG GPP
Sbjct: 180 PGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPP 239
Query: 703 GGPPPXGGXXPXXGXXXXXXXXPGGPP 783
G P P G P P GPP
Sbjct: 240 GPPGPKGAPGPDGPPGADGQSGPPGPP 266
Score = 28.3 bits (60), Expect = 8.6
Identities = 24/90 (26%), Positives = 24/90 (26%), Gaps = 3/90 (3%)
Frame = -2
Query: 679 GAPPPRG-GGXXXPXXXXGXPXXXAPXXPXXXXXXXXXGGXPXXXXXXXXPG--GXXXXX 509
G P P G G P G P P P G P PG G
Sbjct: 184 GPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGD-SGPPGPPGPPGAPGNDGPPGPP 242
Query: 508 XXXXXPPPXXXXGEXAXXPXPGXPPPXGXP 419
P P G PG P P G P
Sbjct: 243 GPKGAPGPDGPPGADGQSGPPGPPGPAGTP 272
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 28.7 bits (61), Expect = 6.5
Identities = 25/87 (28%), Positives = 25/87 (28%), Gaps = 8/87 (9%)
Frame = +1
Query: 547 PXXRGPPXPXXXXXXXX--GGXGPXXXGXXXXXXAXXXP----PPGGXGPP--XXXXXXX 702
P RGPP P G G A P PPG GPP
Sbjct: 180 PGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPP 239
Query: 703 GGPPPXGGXXPXXGXXXXXXXXPGGPP 783
G P P G P P GPP
Sbjct: 240 GPPGPKGAPGPDGPPGADGQSGPPGPP 266
Score = 28.3 bits (60), Expect = 8.6
Identities = 24/90 (26%), Positives = 24/90 (26%), Gaps = 3/90 (3%)
Frame = -2
Query: 679 GAPPPRG-GGXXXPXXXXGXPXXXAPXXPXXXXXXXXXGGXPXXXXXXXXPG--GXXXXX 509
G P P G G P G P P P G P PG G
Sbjct: 184 GPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGD-SGPPGPPGPPGAPGNDGPPGPP 242
Query: 508 XXXXXPPPXXXXGEXAXXPXPGXPPPXGXP 419
P P G PG P P G P
Sbjct: 243 GPKGAPGPDGPPGADGQSGPPGPPGPAGTP 272
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 743 PXXGXXPPXGGGPPXXXXXXXGGPXPP 663
P G PP G PP GGP PP
Sbjct: 325 PHFGMGPPRGFMPPPHPMMFRGGPYPP 351
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 743 PXXGXXPPXGGGPPXXXXXXXGGPXPP 663
P G PP G PP GGP PP
Sbjct: 325 PHFGMGPPRGFMPPPHPMMFRGGPYPP 351
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Frame = -2
Query: 493 PPPXXXXG----EXAXXPXPGXPPPXGXPXXXXXXXPXPXXP 380
PPP G A P P PPP G P P P P
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Frame = -2
Query: 493 PPPXXXXG----EXAXXPXPGXPPPXGXPXXXXXXXPXPXXP 380
PPP G A P P PPP G P P P P
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPP 481
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 5/49 (10%)
Frame = +1
Query: 655 PPPGGXGPPXXXXXXXGGPPPXGGXXPXXGXXXXXXXXPG-----GPPP 786
PPPG PP PPP G P G P GPPP
Sbjct: 83 PPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPP 131
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 5/49 (10%)
Frame = +1
Query: 655 PPPGGXGPPXXXXXXXGGPPPXGGXXPXXGXXXXXXXXPG-----GPPP 786
PPPG PP PPP G P G P GPPP
Sbjct: 106 PPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPP 154
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 5/49 (10%)
Frame = +1
Query: 655 PPPGGXGPPXXXXXXXGGPPPXGGXXPXXGXXXXXXXXPG-----GPPP 786
PPPG PP PPP G P G P GPPP
Sbjct: 356 PPPGMGPPPFMPPPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPP 404
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.154 0.544
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,124,829
Number of Sequences: 27780
Number of extensions: 352952
Number of successful extensions: 1053
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2496624284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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