Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_P13
         (953 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_03_0012 - 7037088-7037282,7037453-7037954,7038079-7038081,704...    32   0.59 
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    30   3.1  

>10_03_0012 -
           7037088-7037282,7037453-7037954,7038079-7038081,
           7040633-7041213
          Length = 426

 Score = 32.3 bits (70), Expect = 0.59
 Identities = 18/55 (32%), Positives = 19/55 (34%)
 Frame = +1

Query: 367 PPXXXXXXXPQKXPXXPXXFFFXPPKXXPGXXPXXKXXXKRGGXPXXKKXPXXPP 531
           PP       PQ  P     F+  PP   PG  P       RGG P     P  PP
Sbjct: 54  PPQYPNPNLPQYYPQY-GNFYPPPPPSMPGPLPAPYDHHHRGGGPAQPPPPPPPP 107


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 15/56 (26%), Positives = 18/56 (32%)
 Frame = +1

Query: 364 PPPXXXXXXXPQKXPXXPXXFFFXPPKXXPGXXPXXKXXXKRGGXPXXKKXPXXPP 531
           PPP              P  F   PP   PG  P  +     G  P  ++ P  PP
Sbjct: 31  PPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPP 86


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,595,971
Number of Sequences: 37544
Number of extensions: 101160
Number of successful extensions: 194
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 144
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2752963900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)