Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_P08
         (927 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical pr...    52   4e-07
Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical pr...    52   4e-07
Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical p...    43   3e-04
U39855-1|AAA81080.3|  615|Caenorhabditis elegans Hypothetical pr...    29   4.7  

>Z72507-7|CAD56569.1|  373|Caenorhabditis elegans Hypothetical
           protein F17C11.9b protein.
          Length = 373

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
 Frame = +1

Query: 391 LLPA-LGSSLTLVSCNSTNRMLNVQSLTYWPSXXQ-LDGHLLTRTFLVTXRITLADVIVF 564
           LLPA LG  L  VS  + ++    Q         Q LD  L+ +T+LV  R++LADV V 
Sbjct: 59  LLPAVLGYVLPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVA 118

Query: 565 XTLLHAFXHVLXPXVRSSLINXXRWXLTXXHXPXXSAVXXSLTLCA 702
             LL AF +VL    R S++N  RW  T  + P    V   ++L +
Sbjct: 119 LDLLPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLAS 164



 Score = 37.1 bits (82), Expect = 0.018
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = +3

Query: 279 ESNAIAYYVANESLRGGXLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVER 458
           E +A+ +   +  L     +  A   QW  +++  LLPA   +V P +    F+K+ VE+
Sbjct: 24  EGDALLFGAESIGLHLTGTSANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQ 83

Query: 459 AKSDL 473
            K++L
Sbjct: 84  YKNEL 88


>Z72507-6|CAA96631.1|  398|Caenorhabditis elegans Hypothetical
           protein F17C11.9a protein.
          Length = 398

 Score = 52.4 bits (120), Expect = 4e-07
 Identities = 38/106 (35%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
 Frame = +1

Query: 391 LLPA-LGSSLTLVSCNSTNRMLNVQSLTYWPSXXQ-LDGHLLTRTFLVTXRITLADVIVF 564
           LLPA LG  L  VS  + ++    Q         Q LD  L+ +T+LV  R++LADV V 
Sbjct: 84  LLPAVLGYVLPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSVA 143

Query: 565 XTLLHAFXHVLXPXVRSSLINXXRWXLTXXHXPXXSAVXXSLTLCA 702
             LL AF +VL    R S++N  RW  T  + P    V   ++L +
Sbjct: 144 LDLLPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLAS 189



 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 27/84 (32%), Positives = 41/84 (48%)
 Frame = +3

Query: 222 FPAGKVPAFESADGXVLLTESNAIAYYVANESLRGGXLATQARVWQWASWSDSELLPASC 401
           FP G  PAFE   G  LL  + +I  ++   S         A   QW  +++  LLPA  
Sbjct: 40  FPLGVTPAFE---GDALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAVL 89

Query: 402 AWVFPYLGIMQFNKQNVERAKSDL 473
            +V P +    F+K+ VE+ K++L
Sbjct: 90  GYVLPSVSAANFDKKTVEQYKNEL 113


>Z72507-15|CAJ55245.1|  365|Caenorhabditis elegans Hypothetical
           protein F17C11.9c protein.
          Length = 365

 Score = 43.2 bits (97), Expect = 3e-04
 Identities = 27/84 (32%), Positives = 41/84 (48%)
 Frame = +3

Query: 222 FPAGKVPAFESADGXVLLTESNAIAYYVANESLRGGXLATQARVWQWASWSDSELLPASC 401
           FP G  PAFE   G  LL  + +I  ++   S         A   QW  +++  LLPA  
Sbjct: 40  FPLGVTPAFE---GDALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAVL 89

Query: 402 AWVFPYLGIMQFNKQNVERAKSDL 473
            +V P +    F+K+ VE+ K++L
Sbjct: 90  GYVLPSVSAANFDKKTVEQYKNEL 113


>U39855-1|AAA81080.3|  615|Caenorhabditis elegans Hypothetical
           protein F18G5.4 protein.
          Length = 615

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
 Frame = -2

Query: 362 PLPDTGLGSQXSSAETFIGNVVSDGI--AFS*EHXSIGT-FECRHFSGRKXLQEVFXLVG 192
           P+  + +    +S  TF+G VVSDGI    S    S+ T FE R    R+ L+ V+    
Sbjct: 514 PMNGSTIREDFASESTFLGRVVSDGIMPRISASSNSVLTEFETRF---RRILKRVYR--S 568

Query: 191 LAXYEIR-CYLSHQSQEXCRGD 129
           L  +EIR   L  +S+  C G+
Sbjct: 569 LQQHEIREEILDERSRIQCSGN 590


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,485,233
Number of Sequences: 27780
Number of extensions: 210456
Number of successful extensions: 417
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)