Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_P06
         (921 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       29   0.26 
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   3.2  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   3.2  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   7.5  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 28.7 bits (61), Expect = 0.26
 Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +2

Query: 479 REGSNKVDVEHIEKCL-PQLMLDFP*INKDAT 571
           R G+ + D+EHI+  L   LM  F  IN+DAT
Sbjct: 44  RPGNGRYDIEHIDPSLCTHLMYGFFGINEDAT 75


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 843 SRHSLALLPALLTSMSDGT 899
           SRH+ ++LP+ L S  DGT
Sbjct: 479 SRHASSILPSSLVSSPDGT 497


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 843 SRHSLALLPALLTSMSDGT 899
           SRH+ ++LP+ L S  DGT
Sbjct: 455 SRHASSILPSSLVSSPDGT 473


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 7.5
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -1

Query: 543 SSISWGKHFSICSTSTLLEPSLCACLTARRH 451
           + +SW  H   C+T  L       CL  R H
Sbjct: 760 NQLSWKSHVEYCTTKALRTAKALGCL-MRNH 789


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 894,057
Number of Sequences: 2352
Number of extensions: 18546
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100055142
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)