Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_P06
         (921 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40934-3|AAA81681.1|   79|Caenorhabditis elegans Hypothetical pr...    42   5e-04
U70852-14|AAM98014.1|  783|Caenorhabditis elegans Gei-4(four) in...    30   2.7  
U70852-13|AAM98015.1|  788|Caenorhabditis elegans Gei-4(four) in...    30   2.7  
U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical pr...    30   2.7  
AC024812-4|AAF59550.1|  197|Caenorhabditis elegans Hypothetical ...    29   4.7  
Z99281-29|CAH04731.2|  438|Caenorhabditis elegans Hypothetical p...    28   8.2  
Z99281-1|CAB16504.2|  439|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>U40934-3|AAA81681.1|   79|Caenorhabditis elegans Hypothetical
           protein F35H10.5 protein.
          Length = 79

 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
 Frame = +2

Query: 332 IKKDVIKELL-ENHFQESKTKIAPHALMLLADVAKCLVTETCLRAVKQAQREGSNKVDVE 508
           IK+  ++ +L      + +  + P AL +L  +   L  E+  RA + A   GS  V  E
Sbjct: 5   IKQSTVRSMLIVARRGKKRLNLDPDALAVLTALINLLAQESVARAAQSAANTGSRHVTKE 64

Query: 509 HIEKCLPQLMLDF 547
           H+++ + QLMLDF
Sbjct: 65  HLKRVIAQLMLDF 77


>U70852-14|AAM98014.1|  783|Caenorhabditis elegans Gei-4(four)
           interacting proteinprotein 4, isoform a protein.
          Length = 783

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 621 ELFEMITLSRFYHRIARHRSRVHPYYLEPLCPSTVRVQIF 740
           E  E +TL +FY R    R R  P +L     S +  QI+
Sbjct: 263 EFLERVTLEKFYRREIERRLRKQPKFLNDFVASIIIDQIY 302


>U70852-13|AAM98015.1|  788|Caenorhabditis elegans Gei-4(four)
           interacting proteinprotein 4, isoform b protein.
          Length = 788

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = +3

Query: 621 ELFEMITLSRFYHRIARHRSRVHPYYLEPLCPSTVRVQIF 740
           E  E +TL +FY R    R R  P +L     S +  QI+
Sbjct: 268 EFLERVTLEKFYRREIERRLRKQPKFLNDFVASIIIDQIY 307


>U58727-5|AAB00585.1| 1106|Caenorhabditis elegans Hypothetical
           protein D1005.1 protein.
          Length = 1106

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = +3

Query: 654 YHRIARHRSRVHPYYLEPLCPSTVRVQIFFAAY 752
           Y R+ +   R+H + +EP C  T + +++ A Y
Sbjct: 91  YVRVGQTEGRLHTFIVEPFCAHTEKDEMYIAIY 123


>AC024812-4|AAF59550.1|  197|Caenorhabditis elegans Hypothetical
           protein Y54E10BR.6 protein.
          Length = 197

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 636 ITLSRFYHRIARHRSRVHPYYLEPLCPSTVRVQIF 740
           +TL  F+H    H   +HP Y  P    T+++++F
Sbjct: 20  LTLRMFFHLSLDHEVCLHPKYFGPNLNETIKMKLF 54


>Z99281-29|CAH04731.2|  438|Caenorhabditis elegans Hypothetical
           protein Y57G11C.49 protein.
          Length = 438

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -3

Query: 175 QGIVDLINK-EQNYVNIEF--VHFSIR*QRRPCLYLWL 71
           +GIV  + + E   VN  F  VHF++  +RRP  Y+W+
Sbjct: 206 EGIVSSVGETEDPDVNFTFSEVHFALTVKRRPQFYVWV 243


>Z99281-1|CAB16504.2|  439|Caenorhabditis elegans Hypothetical
           protein Y57G11C.2 protein.
          Length = 439

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
 Frame = -3

Query: 175 QGIVDLINK-EQNYVNIEF--VHFSIR*QRRPCLYLWL 71
           +GIV  + + E   VN  F  VHF++  +RRP  Y+W+
Sbjct: 207 EGIVSSVGETEDPDVNFTFSEVHFALTVKRRPQFYVWV 244


>Z81028-1|CAB02690.1| 1099|Caenorhabditis elegans Hypothetical
           protein B0365.1 protein.
          Length = 1099

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 9/33 (27%), Positives = 18/33 (54%)
 Frame = +3

Query: 654 YHRIARHRSRVHPYYLEPLCPSTVRVQIFFAAY 752
           Y ++ +   R+H + +EP C  T   +++ A Y
Sbjct: 91  YVKVGQTEGRLHTFIVEPFCAHTENEEMYIAIY 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,404,477
Number of Sequences: 27780
Number of extensions: 389684
Number of successful extensions: 898
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2360254050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)