Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_P03
         (952 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47075-5|CAA87378.1|  402|Caenorhabditis elegans Hypothetical pr...    91   8e-19
Z68315-4|CAA92675.2|  745|Caenorhabditis elegans Hypothetical pr...    29   4.9  

>Z47075-5|CAA87378.1|  402|Caenorhabditis elegans Hypothetical
           protein E02H1.3 protein.
          Length = 402

 Score = 91.5 bits (217), Expect = 8e-19
 Identities = 53/139 (38%), Positives = 75/139 (53%), Gaps = 12/139 (8%)
 Frame = +1

Query: 331 KQKKVDQREFMFEKCHYRHVLLRVSYLGWEYQGLAVQENTTQTVEYHLFEALKRACLIQS 510
           K KK    +F+      R + ++  YLGWE+ GL  Q +T  TVE H+ +AL +  LI+ 
Sbjct: 15  KSKKAKTLDFLAHP--RRKIAIQFFYLGWEHDGLVQQPHTQNTVENHIMQALIKTHLIED 72

Query: 511 RETSNYHRCGRTDKGVSSFGQVISICLRS----------KHSPEEQNKP--SCIRNEIPY 654
               ++ RCGRTDKGVS+F Q  ++ +RS            S +E  K        E+PY
Sbjct: 73  WTKCDFSRCGRTDKGVSAFKQTAAMVVRSLCPGDSGVFWSDSTQEHQKVDYKASGEELPY 132

Query: 655 SKLLNRLLPKHIKVIAWMP 711
            K+LN +LPK I+V AW P
Sbjct: 133 VKMLNGVLPKTIRVFAWAP 151


>Z68315-4|CAA92675.2|  745|Caenorhabditis elegans Hypothetical
           protein F28C6.4a protein.
          Length = 745

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
 Frame = -3

Query: 293 FQLCIMGLQL--YYFLDEIIFVQL*KFLSCCVPVNLLFWWQFFHILTSLILL--FQAHVV 126
           +Q  ++GLQL  Y F   I+F+      SC   +N LF ++   + TSLI L  FQ H+ 
Sbjct: 661 YQPILVGLQLMLYTFSGPILFLCGCNASSCTSLLNHLFSYRISSMCTSLICLYIFQNHL- 719

Query: 125 YFNTTLYS 102
            F  ++YS
Sbjct: 720 -FIWSVYS 726


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,232,653
Number of Sequences: 27780
Number of extensions: 392356
Number of successful extensions: 1148
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2465154230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)