Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_O23
(952 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 50 4e-07
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.005
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.026
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.078
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.3
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 1.7
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 2.2
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 5.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.8
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 50.4 bits (115), Expect = 4e-07
Identities = 38/123 (30%), Positives = 39/123 (31%), Gaps = 7/123 (5%)
Frame = +1
Query: 439 PPGXXP-PXGGXXAXPXGGXLGXPXTTXXPXXGPPXPPXX--PXNPPPXGRXXXTXXP*Q 609
P G P P A P G P PP P P P P P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Query: 610 XKPP----AGGPXXXPXPRXAPLXXXPPPGXGGXXIPPPXXXPXXPXPXXXFPPXPXPXL 777
PP A G P P AP P P G +PPP P P P PP P P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAP--PVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTA 1234
Query: 778 PAP 786
AP
Sbjct: 1235 KAP 1237
Score = 48.4 bits (110), Expect = 1e-06
Identities = 34/123 (27%), Positives = 36/123 (29%), Gaps = 6/123 (4%)
Frame = +1
Query: 457 PXGGXXAXPXGGXLGXPXTTXXPXXGPPXPPXXPXNPPPXGRXXXTXXP*---QXKPPAG 627
P P G P PP P P PP + P PP
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKPSVAAPPVP--VPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Query: 628 GPXXXPXPRXAPLXXXPP---PGXGGXXIPPPXXXPXXPXPXXXFPPXPXPXLPAPKPXX 798
P P AP PP P G +PPP P P P PP P P P P
Sbjct: 1163 KPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Query: 799 XRG 807
G
Sbjct: 1223 SAG 1225
Score = 39.9 bits (89), Expect = 5e-04
Identities = 28/86 (32%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Frame = +1
Query: 535 PPXPPXXPXNPPPXGRXXXTXXP*QXKPPAGGPXXXPXPRXAPLXXXP--PPGXGGXXIP 708
PP P P PP T P K +G P P P AP P P G +P
Sbjct: 1032 PPIP--VPSTAPPV--PIPTSTPPVPKSSSGAPSAPP-PVPAPSSEIPSIPAPSGAPPVP 1086
Query: 709 PPXXXPXXPXPXXXFPPXPXPXLPAP 786
P P P P PP P P + P
Sbjct: 1087 APSGIPPVPKPSVAAPPVPKPSVAVP 1112
Score = 38.3 bits (85), Expect = 0.002
Identities = 45/194 (23%), Positives = 50/194 (25%), Gaps = 7/194 (3%)
Frame = +2
Query: 374 TPPXXXXXPGGXXNX--LPXKKXTPPGXPPQXGGXXPXXXGGHWXXPXQPXPXXXGPPPP 547
TPP G +P P P G G P P P PP P
Sbjct: 1049 TPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG---IPPVPKPSVAAPPVP 1105
Query: 548 XXXRXTPPPXAXXPXPPXXNXXNPXXGAPXXXXAPXXP---LSXXXPPRGXGGPXSPXP- 715
PP A PP P AP P ++ P G P P P
Sbjct: 1106 KPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPS 1165
Query: 716 XXXPXHPXPXXPFLPSRXP-XXXPPSXXXXXXXPLXPPGXXXRSPPXLXXXPDXQPXPGX 892
P P P P P PP P+ P P P P P
Sbjct: 1166 VAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPV-PTPSA 1224
Query: 893 XAXPTXXNPXRXPP 934
P + PP
Sbjct: 1225 GLPPVPVPTAKAPP 1238
Score = 38.3 bits (85), Expect = 0.002
Identities = 33/118 (27%), Positives = 35/118 (29%), Gaps = 2/118 (1%)
Frame = +1
Query: 439 PPGXXP-PXGGXXAXPXGGXLGXPXTTXXPXXGPPXPPXXPXNPP-PXGRXXXTXXP*QX 612
P G P P A P G P PP P PP P P
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP--- 1192
Query: 613 KPPAGGPXXXPXPRXAPLXXXPPPGXGGXXIPPPXXXPXXPXPXXXFPPXPXPXLPAP 786
PP+ P P P + PPP P P P P PP P P AP
Sbjct: 1193 -PPSEAPPV-PKPSVG-VPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 35.5 bits (78), Expect = 0.011
Identities = 36/143 (25%), Positives = 40/143 (27%), Gaps = 3/143 (2%)
Frame = +2
Query: 521 PXXXGPPPPXXXRXTPPPXAXXPXPPXXNXXNPXXGAPXXXXAPXXPLSXXXPP---RGX 691
P P P R P P PP P AP P+ PP
Sbjct: 999 PVSTSPAAPLA-RVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSS 1057
Query: 692 GGPXSPXPXXXPXHPXPXXPFLPSRXPXXXPPSXXXXXXXPLXPPGXXXRSPPXLXXXPD 871
G P +P P P P P PS P PS P+ P +PP
Sbjct: 1058 GAPSAPPPVPAPSSEIPSIP-APSGAPPVPAPS----GIPPVPKPS--VAAPPVPKPSVA 1110
Query: 872 XQPXPGXXAXPTXXNPXRXPPXV 940
P P P P P V
Sbjct: 1111 VPPVPAPSGAPPVPKPSVAAPPV 1133
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.5 bits (83), Expect = 0.003
Identities = 30/98 (30%), Positives = 32/98 (32%)
Frame = -3
Query: 791 GLGAGRXGXGXGGKXXXGXGXXGSXXGGGXXXPPXPGGGXXXRGAXRGXGXXXGPPAGGX 612
GL + G + G G G GGG PP GG G G G G G
Sbjct: 170 GLASHALGNLFHHRGHNGGGFGG--FGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFG 227
Query: 611 XCXGXXVXXXRPXGGGLXGXXGGXGGPXXGXXVVXGXP 498
G GGG G GG GG G G P
Sbjct: 228 GGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
Score = 36.7 bits (81), Expect = 0.005
Identities = 30/93 (32%), Positives = 31/93 (33%), Gaps = 2/93 (2%)
Frame = -3
Query: 803 RXXXGLGAGRXGXGXGGKXXX--GXGXXGSXXGGGXXXPPXPGGGXXXRGAXRGXGXXXG 630
R G G G G G GG G G G G G G G G G G G
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Query: 629 PPAGGXXCXGXXVXXXRPXGGGLXGXXGGXGGP 531
P G G + GG G GG GGP
Sbjct: 243 GPGG----FGGGLGGFGGGPGGFGGGPGGHGGP 271
Score = 30.7 bits (66), Expect = 0.31
Identities = 23/74 (31%), Positives = 25/74 (33%)
Frame = -2
Query: 597 GGXGXXAXGGGVXRXXXGGGGPXXXGXGCXGXXQXPPXWXGXXPPXWGGXPGGVXFFXGX 418
GG G G G G GG G G P + G P +GG PGG G
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG-PGGFGGGPGGFGGGLGG 253
Query: 417 XFXXPPGXXXXXGG 376
P G GG
Sbjct: 254 FGGGPGGFGGGPGG 267
Score = 29.5 bits (63), Expect = 0.73
Identities = 31/98 (31%), Positives = 31/98 (31%)
Frame = -3
Query: 734 GXXGSXXGGGXXXPPXPGGGXXXRGAXRGXGXXXGPPAGGXXCXGXXVXXXRPXGGGLXG 555
G G GG PP PGG G G G G GG G GG G
Sbjct: 188 GGFGGFGGGSGGPPPGPGGF----GGFGGFGGE-GHHHGGHGGFGGGP-------GGFEG 235
Query: 554 XXGGXGGPXXGXXVVXGXPSXPPXGXAXXPPXGGXXPG 441
GG GG G G P G P G PG
Sbjct: 236 GPGGFGGGPGGFGGGLGGFGGGPGGFGGG-PGGHGGPG 272
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.005
Identities = 33/129 (25%), Positives = 38/129 (29%)
Frame = +3
Query: 438 PPRXXPPXGGGXXPPXXGXTGXXPNNXXPXXGAPXPPXXXVQPPPXGPXXRHXPSXTXXT 617
PPR P G PP + N P P + PP G R + T
Sbjct: 365 PPRSAPSTG--RQPPPLSSSRAVSNPPAPPPAIPGRSAPAL--PPLGNASR-TSTPPVPT 419
Query: 618 PXXGPPGXPXPPXXPSRXXXXXXXXXXXXPPXXXRXXXTPXPAXLSSXPXXPPXXPQAXL 797
P PP P P PS P P PA + + P PP P
Sbjct: 420 PPSLPPSAP-PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Query: 798 GPXXXPFXP 824
P P P
Sbjct: 479 APAPAPAAP 487
Score = 34.7 bits (76), Expect = 0.019
Identities = 44/194 (22%), Positives = 52/194 (26%), Gaps = 7/194 (3%)
Frame = +2
Query: 374 TPPXXXXXPGGXXNXLPXKKXT--PPGXPPQXGGXXPXXXGGHWXXPXQPXPXXXGP-PP 544
+PP P + P T PP PP P P P P
Sbjct: 266 SPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKP 325
Query: 545 PXXXRXTPPPXAXXPXPPXXNXXNPXXGAPXXXXAPXXPLSXXXPPRGXGGPXSPXPXXX 724
P + P PP N P AP P P G P
Sbjct: 326 PIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAV 385
Query: 725 PXHPXPXXPFLPSRXPXXXPP--SXXXXXXXPL-XPPGXXXRSPPXL-XXXPDXQPXPGX 892
P P P +P R PP + P+ PP +PP L P P
Sbjct: 386 SNPPAP-PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Query: 893 XAXPTXXNPXRXPP 934
A P + PP
Sbjct: 445 AAPPLPPSAPIAPP 458
Score = 33.9 bits (74), Expect = 0.034
Identities = 42/169 (24%), Positives = 47/169 (27%), Gaps = 7/169 (4%)
Frame = +3
Query: 390 GXPPGGXKTXFXKKKXPPRXXPPXGGGXXP-PXXGXTGXXPNNXXPXXGAPXPPXXXVQP 566
G PP G + PP G P P G + P P AP QP
Sbjct: 323 GKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPP---PPPRSAPSTGR---QP 376
Query: 567 PPXGPXXR--HXPSXTXXTPXXGPPGXPXPPXXPSRXXXXXXXXXXXXPPXXXRXXXTPX 740
PP + P+ P P P P SR PP
Sbjct: 377 PPLSSSRAVSNPPAPPPAIPGRSAPALP-PLGNASRTSTPPVPTPPSLPPSAPPSLPPSA 435
Query: 741 PAXLS----SXPXXPPXXPQAXLGPXXXPFXPPGXXRGPXPXXXXXPXP 875
P L + P PP P A P P PP P P P P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 29.1 bits (62), Expect = 0.96
Identities = 31/137 (22%), Positives = 33/137 (24%), Gaps = 4/137 (2%)
Frame = +3
Query: 537 PXPPXXXVQPPPXGPXXRHXP-SXTXXTPXXGPPGXPXPPXXPSRXXXXXXXXXXXXPPX 713
P P V PP P P S P P P S PP
Sbjct: 257 PPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Query: 714 XXRXXXTPXPAX--LSSXPXXPPXXPQAXLGPXXXPFXPPGXXRGPXPXXXXXPXP-NQX 884
R P S+ PP P P P G P P P Q
Sbjct: 317 PSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP 376
Query: 885 PGXXXXQPXLTPSXDPP 935
P + P PP
Sbjct: 377 PPLSSSRAVSNPPAPPP 393
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/71 (30%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Frame = +2
Query: 542 PPXXXRXTPPPXAXXPXPPXXNXXNPXXGAPXXXXAPXXPLSXXXPPRGXGGPXS-PXPX 718
PP + PP A PP P GAP P P + PP G P + P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLP-MGAP--AAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Query: 719 XXPXHPXPXXP 751
P P P
Sbjct: 472 AAPAPPPAPAP 482
Score = 27.9 bits (59), Expect = 2.2
Identities = 35/143 (24%), Positives = 38/143 (26%), Gaps = 5/143 (3%)
Frame = +1
Query: 379 PPXXXXPRGXXKRXSXKKXDPPGXXPPXGGXXAXPXGGXLGXPXTTXXPXXGPP--XPPX 552
PP R + S PP PP G + P P P P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNS----PPRPIAPVSMNPAINSTS 288
Query: 553 XPXNPPPXGRXXXTXXP*QXKPPAGGPXXXPXPRXAPLXXXPPPGXG--GXXIPPPXXXP 726
P PPP R K P P P PP G G +PPP P
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRP-----PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Query: 727 -XXPXPXXXFPPXPXPXLPAPKP 792
PP P P P
Sbjct: 344 RSNAAGSIPLPPQGRSAPPPPPP 366
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/65 (26%), Positives = 20/65 (30%)
Frame = +2
Query: 740 PXXPFLPSRXPXXXPPSXXXXXXXPLXPPGXXXRSPPXLXXXPDXQPXPGXXAXPTXXNP 919
P P +PS P PS P+ PP S P P A + P
Sbjct: 231 PIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKP 290
Query: 920 XRXPP 934
PP
Sbjct: 291 PLPPP 295
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.026
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +1
Query: 619 PAGGPXXXPXPRXAPLXXXPPPGXGGXXIPPPXXXPXXPXPXXXFPPXPXPXLPAP 786
P P P P P P +PPP P P PP P P AP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +3
Query: 546 PXXXVQPPPXGPXXRHXPSXTXXTPXXGPPGXPXPPXXP 662
P V PP P P + TP P P PP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 26.6 bits (56), Expect = 5.1
Identities = 17/60 (28%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
Frame = +3
Query: 477 PPXXGXTGXXPNNXXPXXGAPXPPXXXVQPPPXGPXXRHXP--SXTXXTPXXGPPGXPXP 650
PP + P P P PP V PPP P P + P P P P
Sbjct: 1690 PPVRPQSAAPPQMSAP---TPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 543 PPXXXVQPPPXGPXXRHXPSXTXXTPXXGPPGXPXPPXXPS 665
PP PP P P P GPP P PP S
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPA-GPPSAPPPPLPAS 1738
Score = 26.2 bits (55), Expect = 6.8
Identities = 27/108 (25%), Positives = 28/108 (25%)
Frame = +3
Query: 441 PRXXPPXGGGXXPPXXGXTGXXPNNXXPXXGAPXPPXXXVQPPPXGPXXRHXPSXTXXTP 620
P+ PP P N AP PP Q PP P PS
Sbjct: 1444 PQVVPPAPMHAVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNV-PVPSMIPSVA 1502
Query: 621 XXGPPGXPXPPXXPSRXXXXXXXXXXXXPPXXXRXXXTPXPAXLSSXP 764
PP P PS P P A LSS P
Sbjct: 1503 QQ-PPSSVAPATAPSSTLPPSQSSFAHVPSPAPPAPQHPSAAALSSAP 1549
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.7 bits (71), Expect = 0.078
Identities = 22/57 (38%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Frame = +1
Query: 616 PPAGGPXXXPXPRXAPLXXXPP-PGXGGXXIPPPXXXPXXPXPXXXFPPXPXPXLPA 783
PP P P AP+ PP P GG PPP P P PP P P PA
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGG---PPPPPPP--PGVAGAGPPPPPPPPPA 784
Score = 28.3 bits (60), Expect = 1.7
Identities = 23/64 (35%), Positives = 23/64 (35%)
Frame = +2
Query: 536 PPPPXXXRXTPPPXAXXPXPPXXNXXNPXXGAPXXXXAPXXPLSXXXPPRGXGGPXSPXP 715
PPPP TP P A P PP P G P P P PP G G P P
Sbjct: 734 PPPPAVIVPTPAP-APIPVPPPA----PIMGGP-----PPPP-----PPPGVAGAGPPPP 778
Query: 716 XXXP 727
P
Sbjct: 779 PPPP 782
Score = 27.9 bits (59), Expect = 2.2
Identities = 19/62 (30%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = +3
Query: 735 PXPAXLSSXPXXPPXXPQ-AXLGPXXXPFXPPGXXRGPXPXXXXXPXPNQXPGXXXXQPX 911
P PA + P PP P A GP P PP G P P P +
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG--GSRYYAPAPQAEPEPKIDETS 809
Query: 912 LT 917
LT
Sbjct: 810 LT 811
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 515 PXPXXXGPPPPXXXRXTPPPXAXXPXPPXXNXXNPXXGA 631
P P GPPPP PPP PP P A
Sbjct: 754 PAPIMGGPPPP-----PPPPGVAGAGPPPPPPPPPAVSA 787
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +2
Query: 725 PXHPXPXXPFLPSRXPXXXPPSXXXXXXXPLXPPGXXXRSPPXLXXXPDXQPXPGXXAXP 904
P P P P R P PP P P ++PP P P P A P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP----IPSSLPPPAQPAAP 180
Query: 905 TXXNP 919
P
Sbjct: 181 VKSPP 185
Score = 27.9 bits (59), Expect = 2.2
Identities = 17/66 (25%), Positives = 19/66 (28%)
Frame = +3
Query: 438 PPRXXPPXGGGXXPPXXGXTGXXPNNXXPXXGAPXPPXXXVQPPPXGPXXRHXPSXTXXT 617
PP PP PP P+ P + PP P P PS
Sbjct: 139 PPTSAPPRPS-IPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPM 197
Query: 618 PXXGPP 635
P PP
Sbjct: 198 PPKVPP 203
Score = 27.5 bits (58), Expect = 2.9
Identities = 25/96 (26%), Positives = 28/96 (29%), Gaps = 1/96 (1%)
Frame = +3
Query: 378 PPXXGXPPGGXKTXFXKKKXPPRXX-PPXGGGXXPPXXGXTGXXPNNXXPXXGAPXPPXX 554
PP PP PPR PP PP P++ P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP----PAQPAA 179
Query: 555 XVQPPPXGPXXRHXPSXTXXTPXXGPPGXPXPPXXP 662
V+ PP P P PP P P P
Sbjct: 180 PVKSPPSAPSL----------PSAVPPMPPKVPPPP 205
Score = 27.5 bits (58), Expect = 2.9
Identities = 25/100 (25%), Positives = 32/100 (32%), Gaps = 5/100 (5%)
Frame = +2
Query: 506 PXQPXPXXX-GPPPPXXXRXTPPPXAXXPXPPXXNXXNPXXGAPXXXXAPXXPLSXXXPP 682
P P P PP R + PP + PP + P + P P+ PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVK--SPP 185
Query: 683 RGXGGPXS--PXPXXXPXHPXPXXPF--LPSRXPXXXPPS 790
P + P P P P P SR PP+
Sbjct: 186 SAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPA 225
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Frame = +3
Query: 522 PXXGAPXPPXXXVQPP---PXGPXXRHXPSXTXXTPXXGPPGXPXPPXXPS 665
P AP PP P P P P+ P PPG PP P+
Sbjct: 487 PGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPA 537
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 643 PXPRXAPLXXXPPPGXGGXXIPPPXXXPXXPXPXXXFPPXPXPXLP 780
P PR PL P P PP P P PP P +P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 26.6 bits (56), Expect = 5.1
Identities = 16/55 (29%), Positives = 18/55 (32%)
Frame = -3
Query: 779 GRXGXGXGGKXXXGXGXXGSXXGGGXXXPPXPGGGXXXRGAXRGXGXXXGPPAGG 615
G G GG+ G G G G GG RG G G +GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.8
Identities = 24/83 (28%), Positives = 24/83 (28%), Gaps = 4/83 (4%)
Frame = +1
Query: 544 PPXXPXNPPPXGRXXXTXXP*QXKPPAGGPXXXPXPRXAPLXXXPPP--GXGGXXIP--P 711
PP P PP T P PP P A P G P P
Sbjct: 167 PP--PSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIP 224
Query: 712 PXXXPXXPXPXXXFPPXPXPXLP 780
P P P PP P P LP
Sbjct: 225 PTYTPKQADPLPAPPPPPPPTLP 247
Score = 25.8 bits (54), Expect = 9.0
Identities = 26/109 (23%), Positives = 29/109 (26%), Gaps = 13/109 (11%)
Frame = +1
Query: 505 PXTTXXPXXGPPXPPXXPX---------NPPPX----GRXXXTXXP*QXKPPAGGPXXXP 645
P T+ PP PP P N P GR P P P P
Sbjct: 179 PATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAP 238
Query: 646 XPRXAPLXXXPPPGXGGXXIPPPXXXPXXPXPXXXFPPXPXPXLPAPKP 792
P P PP +P P PP P P+P
Sbjct: 239 PPPPPPTL--PPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRP 285
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,869,721
Number of Sequences: 5004
Number of extensions: 28954
Number of successful extensions: 254
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 485316198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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