SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_O22
         (928 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom...   104   2e-23
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc...    71   3e-13
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom...    57   4e-09
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces...    57   4e-09
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom...    55   1e-08
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2...    54   3e-08
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch...    51   3e-07
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom...    51   3e-07
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ...    50   5e-07
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p...    48   1e-06
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo...    46   8e-06
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz...    44   4e-05
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha...    42   9e-05
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos...    41   3e-04
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc...    40   7e-04
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom...    38   0.003
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3...    36   0.006
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar...    33   0.057
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc...    29   0.93 
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb...    29   0.93 
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ...    26   6.6  
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc...    26   6.6  
SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase Gut2|Schi...    26   8.7  

>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 407

 Score =  104 bits (250), Expect = 2e-23
 Identities = 61/186 (32%), Positives = 86/186 (46%), Gaps = 1/186 (0%)
 Frame = +3

Query: 276 MVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFKQISQAYEVLSNPDK 455
           MVKET  Y++L V    +  E            HPDKNPN G+KFK+IS+AYE+L++ +K
Sbjct: 1   MVKETKLYEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEK 60

Query: 456 RRIYDQGGEQALKEXXXXXXXXXXPMDLF-DMXXXXXXXXXXXXXXXXXXDVIHQLSVTL 632
           R  YD+ GE+ L+             DLF                     D++H + VTL
Sbjct: 61  RATYDRFGEEGLQGGGADGGMSAD--DLFASFFGGGMFGGGMPRGPRKGKDLVHTIKVTL 118

Query: 633 EELYCGTVRKLTLQKNVIXXXXXXXXXXXXAVQTCPVCRGSGMQVQFTSXXRV*YXXSTV 812
           E+LY G   KL LQK VI            +V++C  C GSG++    +   +       
Sbjct: 119 EDLYRGKTTKLALQKKVICPKCSGRGGKEGSVKSCASCNGSGVKFITRAMGPMIQRMQMT 178

Query: 813 CCECRG 830
           C +C G
Sbjct: 179 CPDCNG 184


>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 379

 Score = 70.5 bits (165), Expect = 3e-13
 Identities = 33/68 (48%), Positives = 42/68 (61%)
 Frame = +3

Query: 276 MVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFKQISQAYEVLSNPDK 455
           MV +T  YD L V+P  +  E            HPDKNPN  +KFK+IS AYEVLS+P +
Sbjct: 1   MVADTKLYDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQR 60

Query: 456 RRIYDQGG 479
           R++YDQ G
Sbjct: 61  RKLYDQYG 68


>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
           type|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 392

 Score = 56.8 bits (131), Expect = 4e-09
 Identities = 30/76 (39%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
 Frame = +3

Query: 285 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNE----GEKFKQISQAYEVLSNPD 452
           +T YYD+LG+  + T  +            HPDKNP++     EKF++IS+AY+VL +  
Sbjct: 6   DTEYYDLLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEKFQKISEAYQVLGDEK 65

Query: 453 KRRIYDQ-GGEQALKE 497
            R  YDQ G E+A+ E
Sbjct: 66  LRSQYDQFGKEKAVPE 81


>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 403

 Score = 56.8 bits (131), Expect = 4e-09
 Identities = 31/73 (42%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = +3

Query: 267 IIKMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKN--PNEGEKFKQISQAYEVL 440
           IIK  K   YY+IL +K  CT  E            HPDKN  P+  E FK +S+A++VL
Sbjct: 106 IIKY-KNHQYYEILDLKKTCTDTEIKKSYKKLALQLHPDKNHAPSADEAFKMVSKAFQVL 164

Query: 441 SNPDKRRIYDQGG 479
           S+P+ R  YD+ G
Sbjct: 165 SDPNLRAHYDRTG 177


>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 381

 Score = 55.2 bits (127), Expect = 1e-08
 Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
 Frame = +3

Query: 303 ILGVKPNCTTDEXXXXXXXXXXXXHPDKNP-NEG--EKFKQISQAYEVLSNPDKRRIYDQ 473
           ILGV  + +  E            HPDKNP NE   EKF +I++A+EVLS+P++R+IYD 
Sbjct: 11  ILGVSKDASESEIRKAYRQLTKQWHPDKNPGNEEAQEKFIEINKAHEVLSDPEQRKIYDA 70

Query: 474 GGEQAL 491
            GE+ L
Sbjct: 71  YGEEGL 76



 Score = 27.5 bits (58), Expect = 2.8
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +3

Query: 723 AVQTCPVCRGSGMQV 767
           A+++CPVC GSG +V
Sbjct: 168 AIESCPVCGGSGFRV 182


>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 413

 Score = 54.0 bits (124), Expect = 3e-08
 Identities = 46/197 (23%), Positives = 73/197 (37%), Gaps = 11/197 (5%)
 Frame = +3

Query: 276 MVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNP-----NEGEKFKQISQAYEVL 440
           MV +T  YDIL V    + +E            HPDK P        E+F+ + +AY++L
Sbjct: 1   MVVDTKLYDILEVHFEASAEEIKKSYKRLALLHHPDKAPIHEKEEAAERFRGVQEAYDIL 60

Query: 441 SNPDKRRIYDQGG--EQALKEXXXXXXXXXXPMDLFDM--XXXXXXXXXXXXXXXXXXDV 608
            +P+ R +YD  G    +  +             +F M                    DV
Sbjct: 61  KDPESREMYDMYGMNSDSNSQFDGGVNLDDVLAQMFGMNFEAGGPGKNVPRDRKRRGSDV 120

Query: 609 IHQLSVTLEELYCGTVRKLTLQKNVIXXXXXXXXXXXXAVQ-TCPVCRGSGMQVQFTSXX 785
           IH   ++LE+++ G   KL   +N +            A +  C  C G G++       
Sbjct: 121 IHDYEISLEDMFKGKEVKLRATRNTLCPRCQGRGGKRFAKEKPCLSCDGKGVKQHLKHVG 180

Query: 786 RV*YXXSTVCCE-CRGQ 833
                 S V C+ C G+
Sbjct: 181 PHHVTNSQVICDTCNGK 197


>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 476

 Score = 50.8 bits (116), Expect = 3e-07
 Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
 Frame = +3

Query: 270 IKMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE---KFKQISQAYEVL 440
           +K  K   +Y ILGV    T  E            HPDKN    E   +FK++ +AY +L
Sbjct: 342 LKKSKRKDHYKILGVSKEATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKEVGEAYTIL 401

Query: 441 SNPDKRRIYDQG 476
           S+P+ RR +D G
Sbjct: 402 SDPESRRRFDSG 413


>SPCC63.03 |||DNAJ domain protein, DNAJC11
           family|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 642

 Score = 50.8 bits (116), Expect = 3e-07
 Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
 Frame = +3

Query: 297 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG-----EKFKQISQAYEVLSNPDKRR 461
           Y  LG+  + T+D+            HPD++  +      EKF+ I  AYEVLS+P K+ 
Sbjct: 10  YLALGLPKDATSDQIKESYYRLSRLFHPDRHTADQKAAAEEKFQIIQHAYEVLSDPSKKE 69

Query: 462 IYDQGGEQALK 494
           IYD  GEQ LK
Sbjct: 70  IYDNFGEQGLK 80


>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 528

 Score = 50.0 bits (114), Expect = 5e-07
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
 Frame = +3

Query: 288 TTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG--EKFKQISQAYEVLSNPDKRR 461
           T  Y  LGV  + +  E            HPD NP++   +KF +I QAYEVL +P K++
Sbjct: 85  TDPYKTLGVSKSASASEIKSAYYKLAKQYHPDANPDKAAQDKFVEIKQAYEVLQDPKKKK 144

Query: 462 IYDQGGEQALK 494
            +D  G  A K
Sbjct: 145 AFDTYGAGAFK 155


>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 355

 Score = 48.4 bits (110), Expect = 1e-06
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
 Frame = +3

Query: 267 IIKMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKN---PNEG-EKFKQISQAYE 434
           +++ V +  YYDIL +  +   D             HPDKN   P    EKF+++++AY+
Sbjct: 1   MVQRVVDRDYYDILNISVDADGDTIKKSYRRLAILYHPDKNRENPEAAREKFQKLAEAYQ 60

Query: 435 VLSNPDKRRIYDQGGE 482
           VLS+P  R  YD+ G+
Sbjct: 61  VLSDPKLREKYDKLGK 76


>SPBC1773.09c |mug184||meiotically upregulated gene
           Mug184|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 551

 Score = 46.0 bits (104), Expect = 8e-06
 Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
 Frame = +3

Query: 294 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK----FKQISQAYEVLSNPDKRR 461
           YY IL ++ N T  +            HPD+NP + E+    F+++  A+EVLS+  KR 
Sbjct: 13  YYAILKLQKNATFQQIRKQYLFLALQYHPDRNPGDEERAVKRFQRLQLAHEVLSDATKRL 72

Query: 462 IYDQ 473
           IYDQ
Sbjct: 73  IYDQ 76


>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
           Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 289

 Score = 43.6 bits (98), Expect = 4e-05
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = +3

Query: 294 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNE---GEKFKQISQAYEVLSNPDKRRI 464
           YY++LG+  +    E            HPDKNPN+    EKF  +  AY  L +   R+ 
Sbjct: 10  YYELLGINEDAQDQEIHRAWRKTSLKYHPDKNPNDPKAAEKFHMLQLAYNALIDVQLRKA 69

Query: 465 YD 470
           YD
Sbjct: 70  YD 71


>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 380

 Score = 42.3 bits (95), Expect = 9e-05
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
 Frame = +3

Query: 282 KETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNP---NEGEKFKQISQAYEVLSNPD 452
           K+   Y+IL V  +    E            HPD+NP   +  E F QI+ AY +LSN D
Sbjct: 6   KDMDCYEILQVNHDSDLQEIKANYRKLALQYHPDRNPGIEDYNEIFSQINAAYNILSNDD 65

Query: 453 KRRIYDQ 473
           KR+ +++
Sbjct: 66  KRKWHEK 72


>SPBC11B10.05c |rsp1||random septum position protein
           Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 494

 Score = 40.7 bits (91), Expect = 3e-04
 Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
 Frame = +3

Query: 294 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPN-EGE---KFKQISQAYEVLSNPDKRR 461
           YY ILG +   +  E            HPD+NP  E E   +F+ I +A+EVL +P  R 
Sbjct: 13  YYTILGAESTSSYVEIRQQYLKLVLRYHPDRNPGREAEVLPQFQLIQKAHEVLKDPKLRE 72

Query: 462 IYDQ 473
           ++DQ
Sbjct: 73  LFDQ 76


>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 442

 Score = 39.5 bits (88), Expect = 7e-04
 Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
 Frame = +3

Query: 282 KETTYYDILGVKP---NCTTDEXXXXXXXXXXXXHPDK-----NPNEGEKFKQISQAYEV 437
           K+  +Y +LG+        T++            HPDK     N N+   FK I +AYE+
Sbjct: 94  KQQDHYAVLGLSKYRYKADTEQIKKAHLKKVLKHHPDKKAASGNINDDSFFKCIQKAYEI 153

Query: 438 LSNPDKRRIYDQGGEQA 488
           LS+P +RR +D   E A
Sbjct: 154 LSDPVRRRQFDSVDENA 170


>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 303

 Score = 37.5 bits (83), Expect = 0.003
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +3

Query: 285 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFKQISQAYEVLSNPDKRRI 464
           + T+Y++L V    +  E            HPDKNP   E +  +     +L N + R+ 
Sbjct: 38  KATFYELLEVPTKASIKEINRAYRKKSILYHPDKNPKSKELYTLLGLIVNILRNTETRKR 97

Query: 465 YD 470
           YD
Sbjct: 98  YD 99


>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 208

 Score = 36.3 bits (80), Expect = 0.006
 Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
 Frame = +3

Query: 294 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDK-NPNEG----EKFKQISQAYEVLSNPDKR 458
           YY IL + P  + +E            HPD+ +P+      E+F+ +++AY VLS+  +R
Sbjct: 5   YYAILNITPKASAEEIKYAYKKAALETHPDRVSPSARARATEQFQLVNEAYYVLSDNSRR 64

Query: 459 RIYDQ 473
             YD+
Sbjct: 65  AQYDR 69


>SPAC1071.09c |||DNAJ domain protein, DNAJC9
           family|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 282

 Score = 33.1 bits (72), Expect = 0.057
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
 Frame = +3

Query: 297 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK------FKQISQAYEVLSNPDKR 458
           Y +LGV+ + + +             HPD+  +E +K      F +++ AY VLS+  +R
Sbjct: 33  YSVLGVEKDASDELIRRAYRKKALQHHPDRIHDEEKKVEARIEFDKVAIAYGVLSDKKRR 92

Query: 459 RIYDQGGE 482
           + YD+ G+
Sbjct: 93  KHYDKTGQ 100


>SPAC926.05c |||diphthamide biosynthesis protein Dph4
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 139

 Score = 29.1 bits (62), Expect = 0.93
 Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
 Frame = +3

Query: 294 YYDILGVKPN--CTTDEXXXXXXXXXXXXHPDK---NPNEGEKFKQISQAYEVLSNPDKR 458
           +Y +L +K     T DE            HPDK    P+      Q+ +AY+VLS+   R
Sbjct: 3   HYSVLNLKDGKTYTDDEIKEAYRKALLLFHPDKCKEKPSVVYTIDQVKEAYQVLSSEKDR 62

Query: 459 RIY 467
           + Y
Sbjct: 63  QQY 65


>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 209

 Score = 29.1 bits (62), Expect = 0.93
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
 Frame = +3

Query: 297 YDILGVKPNCTTDEXXXXXXXXXXXXHPDK---NPNEGEKFKQISQAYEVLSNPDKRRIY 467
           YD+L + P  + D+            HPDK   NP   + F  + +A   L N   R   
Sbjct: 33  YDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAADAFDILKKAESDLVNDKIRESL 92

Query: 468 D 470
           D
Sbjct: 93  D 93


>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
           Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 611

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 8/65 (12%)
 Frame = +3

Query: 297 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPN-------EGEK-FKQISQAYEVLSNPD 452
           Y+ILG+    + D+            HPDK  N       E EK + +I+ AY  L++  
Sbjct: 100 YEILGIAKGTSVDDVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHYIEITNAYRALTDDK 159

Query: 453 KRRIY 467
            R  Y
Sbjct: 160 TRENY 164


>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 270

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +3

Query: 279 VKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE 404
           +K  T Y+IL +   CT ++            HPDK  N  +
Sbjct: 28  LKSLTPYEILELPRTCTANDIKRKYIELVKKHHPDKMKNASQ 69


>SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase
           Gut2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 649

 Score = 25.8 bits (54), Expect = 8.7
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 522 KIHHHYHPLPLMLVHHLDHKFAFCQDSRAP 433
           ++ H YH +PL L  HL H +     SRAP
Sbjct: 494 RLIHEYH-IPLRLAKHLSHNYG----SRAP 518


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,043,342
Number of Sequences: 5004
Number of extensions: 56863
Number of successful extensions: 146
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 469338710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -