Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_O22
(928 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 126 2e-29
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 71 1e-12
Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 68 1e-11
U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain (p... 65 8e-11
Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical pr... 61 1e-09
Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical pr... 58 9e-09
Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical p... 51 1e-06
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 50 2e-06
U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain (pr... 48 1e-05
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 46 5e-05
Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical pr... 44 2e-04
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 43 3e-04
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 43 4e-04
Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical p... 42 6e-04
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 42 6e-04
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 41 0.001
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 41 0.001
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 40 0.003
Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 35 0.072
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 35 0.072
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 35 0.072
U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain (pr... 35 0.095
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 35 0.095
U40029-1|AAA81123.3| 360|Caenorhabditis elegans Serpentine rece... 31 0.88
U97550-3|AAK18981.2| 423|Caenorhabditis elegans Hypothetical pr... 28 8.2
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 126 bits (305), Expect = 2e-29
Identities = 68/186 (36%), Positives = 92/186 (49%)
Frame = +3
Query: 276 MVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFKQISQAYEVLSNPDK 455
MVKET YYD+LGVKP+ + +E HPDKNP+ E+FKQISQAYEVLS+ K
Sbjct: 1 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKK 60
Query: 456 RRIYDQGGEQALKEXXXXXXXXXXPMDLFDMXXXXXXXXXXXXXXXXXXDVIHQLSVTLE 635
R+IYDQGGE+AL+ P D+FDM +H L VTL+
Sbjct: 61 RQIYDQGGEEALQGGGGGGEGFHNPFDVFDM--FFGGGGRGGRGERRVKPTVHNLRVTLD 118
Query: 636 ELYCGTVRKLTLQKNVIXXXXXXXXXXXXAVQTCPVCRGSGMQVQFTSXXRV*YXXSTVC 815
LY G +KL + + + + C CRG G++V+ + + C
Sbjct: 119 TLYKGVTKKLKISRTATCKGCKGLGGNEGSAKECSDCRGRGIKVRVIRMGPMVQQMQSHC 178
Query: 816 CECRGQ 833
C G+
Sbjct: 179 DSCNGE 184
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/86 (39%), Positives = 48/86 (55%)
Frame = +3
Query: 285 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEKFKQISQAYEVLSNPDKRRI 464
+TT Y L V+P+ + + HPDKNP+ G+KFK+IS AYEVLS+P+KRR+
Sbjct: 11 DTTLYTTLNVRPDASQADIKKSYFKLAKEYHPDKNPDHGDKFKEISFAYEVLSSPEKRRL 70
Query: 465 YDQGGEQALKEXXXXXXXXXXPMDLF 542
YD G + ++ P LF
Sbjct: 71 YDARGLEGVQGGGAGGGGGGFPGGLF 96
Score = 42.3 bits (95), Expect = 5e-04
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +3
Query: 603 DVIHQLSVTLEELYCGTVRKLTLQKNVIXXXXXXXXXXXXAVQTCPVCRGSGMQ 764
D +H L+VTLEELY G KL L K + C CRG G++
Sbjct: 141 DTVHPLNVTLEELYVGKTSKLKLSKKALCKTCEGSGGKKGEKYKCDACRGRGVK 194
>Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical
protein F54D5.8 protein.
Length = 331
Score = 67.7 bits (158), Expect = 1e-11
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +3
Query: 294 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG--EKFKQISQAYEVLSNPDKRRIY 467
YY +LG+ T DE HPDKN G KFK+I++AY+VLS+ K++IY
Sbjct: 5 YYKVLGISKGATDDEIKKAYRKMALKYHPDKNKEAGAENKFKEIAEAYDVLSDDKKKKIY 64
Query: 468 DQGGEQALKE 497
DQ GE+ LKE
Sbjct: 65 DQFGEEGLKE 74
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/27 (40%), Positives = 20/27 (74%)
Frame = +3
Query: 606 VIHQLSVTLEELYCGTVRKLTLQKNVI 686
V+H LSV+LE++ GT +K+ + + V+
Sbjct: 159 VLHDLSVSLEDVLKGTTKKMKITRKVM 185
>U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 14 protein.
Length = 215
Score = 64.9 bits (151), Expect = 8e-11
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Frame = +3
Query: 297 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKN----PNEGEKFKQISQAYEVLSNPDKRRI 464
Y++LG++ N T DE HPDKN P + E FK+I+ A VLSNP+KRR+
Sbjct: 40 YNVLGIQKNATDDEIKKAYRKLALRYHPDKNLDGDPEKTEMFKEINYANAVLSNPNKRRV 99
Query: 465 YDQGGEQALK 494
YD+ GE LK
Sbjct: 100 YDEMGETGLK 109
>Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical
protein T15H9.7 protein.
Length = 249
Score = 60.9 bits (141), Expect = 1e-09
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Frame = +3
Query: 294 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNE---GEKFKQISQAYEVLSNPDKRRI 464
+Y ILGV N ++ HPD+N ++ EKF+ +S AYEVLS+ +KR +
Sbjct: 25 FYKILGVAKNANANQIKKAYRKLAKELHPDRNQDDEMANEKFQDLSSAYEVLSDKEKRAM 84
Query: 465 YDQGGEQALKEXXXXXXXXXXPM-DLFDMXXXXXXXXXXXXXXXXXXDVIHQLSVTLEEL 641
YD+ GE+ + + P F DV L VTLEE+
Sbjct: 85 YDRHGEEGVAKMGGGGGGGHDPFSSFFGDFFGGGGGHGGEEGTPKGADVTIDLFVTLEEV 144
Query: 642 YCGTVRKLTLQKNV 683
Y G ++ +K V
Sbjct: 145 YNGHFVEIKRKKAV 158
>Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical
protein R74.4 protein.
Length = 378
Score = 58.0 bits (134), Expect = 9e-09
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +3
Query: 279 VKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG---EKFKQISQAYEVLSNP 449
V E +Y +LGV+ + E HPD+NPN+ E+FK++S AY VLS+P
Sbjct: 13 VSEMDFYQLLGVEKMASEAEIKSAYRKLALKYHPDRNPNDAHAQEEFKKVSIAYSVLSDP 72
Query: 450 DKRRIYDQGG 479
+KRR YD G
Sbjct: 73 NKRRQYDVSG 82
>Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical
protein B0035.14 protein.
Length = 401
Score = 51.2 bits (117), Expect = 1e-06
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 294 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDK--NPNEGEKFKQISQAYEVLSNPDKRRIY 467
YY+IL + + D+ HPDK P+ E FK + AY VLS+ DKRR Y
Sbjct: 138 YYEILKIDKKASDDDIRKEYRKLALKLHPDKCRAPHATEAFKALGNAYAVLSDTDKRRQY 197
Query: 468 DQGGEQA 488
DQ G +A
Sbjct: 198 DQYGAEA 204
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +3
Query: 294 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKN---PNEGEKFKQISQAYEVLSNPDKRRI 464
YY++LGV+ + HPD+N PN ++F +I++AYEVL + + R+
Sbjct: 21 YYELLGVERDADDRTIRKAFKKLAIKKHPDRNTDDPNAHDEFVKINKAYEVLKDENLRKK 80
Query: 465 YDQGGEQALKE 497
YDQ GE+ L++
Sbjct: 81 YDQFGEKGLED 91
>U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 4 protein.
Length = 274
Score = 48.0 bits (109), Expect = 1e-05
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +3
Query: 273 KMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG--EKFKQISQAYEVLSN 446
K +++ T+Y++LGV+ T E HPD + E F ++ AY+VL
Sbjct: 22 KKIRQRTHYEVLGVESTATLSEIKSAFYAQSKKVHPDNSSEESATASFLELKNAYDVLRR 81
Query: 447 PDKRRIYD 470
P RR+YD
Sbjct: 82 PADRRLYD 89
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Frame = +3
Query: 294 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK----FKQISQAYEVLSNPDKRR 461
+Y++L V+ + D+ HPDKNP+ E+ F+ + AY+VLS+P +R
Sbjct: 29 HYEVLEVERDADDDKIKKNYRKLALKWHPDKNPDRIEECTQQFRLLQAAYDVLSDPRERE 88
Query: 462 IYDQGGEQALK 494
YD+ E LK
Sbjct: 89 FYDRHRESILK 99
>Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical
protein T04A8.9 protein.
Length = 249
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +3
Query: 294 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE----KFKQISQAYEVLSNPDKRR 461
+Y +LG+ + + + HPD NP E KF Q++ AYE+LS+ DKR+
Sbjct: 25 HYKVLGLAQSASQKDIKSAYYKLSKQHHPDTNPTNKEEAAKKFHQVAMAYEILSSEDKRK 84
Query: 462 IYD 470
YD
Sbjct: 85 AYD 87
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 45.6 bits (103), Expect = 5e-05
Identities = 28/74 (37%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +3
Query: 273 KMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK------FKQISQAYE 434
++V + YY ILGV+ N E HPD +E EK F I+ A E
Sbjct: 374 ELVGKRDYYKILGVRRNANKREITKAYRKMAQKWHPDNFQDEKEKKKAEKKFIDIAAAKE 433
Query: 435 VLSNPDKRRIYDQG 476
VLSN +KRR +D G
Sbjct: 434 VLSNEEKRRAFDNG 447
>Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical
protein T24H10.3 protein.
Length = 242
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Frame = +3
Query: 297 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE-------KFKQISQAYEVLSNPDK 455
Y++LGVK +C HPDK+ E KF+ +++AY++LS+ +K
Sbjct: 16 YELLGVKKDCDEKALKKGYYRQSMRWHPDKSNLVEEDMQTYTTKFQLLNKAYQILSDEEK 75
Query: 456 RRIYDQGG 479
R+IYD+ G
Sbjct: 76 RKIYDETG 83
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 43.2 bits (97), Expect = 3e-04
Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +3
Query: 294 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE------KFKQISQAYEVLSNPDK 455
YY ILGVK N + E HPD +E E KF I+ A EVL + +K
Sbjct: 380 YYKILGVKRNASKREITKAYRKLAQKWHPDNFSDEEEKKKAEKKFIDIAAAKEVLQDEEK 439
Query: 456 RRIYDQG 476
RR +DQG
Sbjct: 440 RRQFDQG 446
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = +3
Query: 297 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE--KFKQISQAYEVLSNPDKRRIYD 470
Y +LG+ + E HPDK +E +F +I++AYEVLS+P ++ YD
Sbjct: 24 YKVLGISRRASAKEIKSAYKSLAREWHPDKRKDEAASGRFMEIAEAYEVLSDPLRKERYD 83
Query: 471 QGG 479
+ G
Sbjct: 84 RFG 86
>Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical
protein K07F5.16 protein.
Length = 155
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Frame = +3
Query: 282 KETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDK----NPNEGEKFKQISQAYEVLSNP 449
KE Y +LG + + D+ HPDK N N EKF ++ AY +L++
Sbjct: 12 KEPKLYRLLGCDESSSIDQITAEYRARVRDCHPDKVKEHNTNSTEKFMELQNAYSILTSD 71
Query: 450 DKRRIYD 470
+R+ YD
Sbjct: 72 SRRKTYD 78
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 41.9 bits (94), Expect = 6e-04
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Frame = +3
Query: 282 KETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGEK------FKQISQAYEVLS 443
+E +Y IL V + T DE HPD+ + EK F ++ +A+EVL
Sbjct: 23 EEIDFYAILNVPKDATDDEIIKAYRKRCLMFHPDRFVDNDEKKDAERVFVKLRRAHEVLL 82
Query: 444 NPDKRRIYDQGGEQAL 491
+P +R IYD G Q L
Sbjct: 83 DPKQRAIYDALGVQGL 98
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 294 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE--KFKQISQAYEVLSNPDKRRIY 467
YY LGV HPD N + KF++IS+AYEVLS+ KR+ Y
Sbjct: 45 YYKTLGVDKKSDAKAIKKAYFQLAKKYHPDVNKTKEAQTKFQEISEAYEVLSDDTKRQEY 104
Query: 468 DQGG 479
D G
Sbjct: 105 DAYG 108
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 40.7 bits (91), Expect = 0.001
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = +3
Query: 294 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE--KFKQISQAYEVLSNPDKRRIY 467
YY LGV HPD N + KF++IS+AYEVLS+ KR+ Y
Sbjct: 45 YYKTLGVDKKSDAKAIKKAYFQLAKKYHPDVNKTKEAQTKFQEISEAYEVLSDDTKRQEY 104
Query: 468 DQGG 479
D G
Sbjct: 105 DAYG 108
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 39.5 bits (88), Expect = 0.003
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 294 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDK--NPNEGEKFKQISQAYEVLSNPDKRRIY 467
+Y IL V + DE HPDK +P+ E K ++ A+ +L +P KRR Y
Sbjct: 28 FYKILNVDKKASPDEIRIAFRKRIREVHPDKCKHPSATEASKVVNNAFSLLMDPAKRRQY 87
Query: 468 D 470
D
Sbjct: 88 D 88
>Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical
protein C01G10.12 protein.
Length = 191
Score = 35.9 bits (79), Expect = 0.041
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Frame = +3
Query: 294 YYDILGVKPNCTTDEXXXXXXXXXXXXHPDKN---------------PNEGEKFKQISQA 428
YY+I+GV + T E HPD++ +E E+F + +A
Sbjct: 19 YYEIIGVSASATRQEIRDAFLKKTKQLHPDQSRKSSKSDSRVGWATGSSETEQFMLVKEA 78
Query: 429 YEVLSNPDKRRIYD 470
Y+VL N +KR+ YD
Sbjct: 79 YDVLRNEEKRKEYD 92
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 35.1 bits (77), Expect = 0.072
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 375 HPDKNPNEGEKFKQISQAYEVLSN 446
HPDKNP E F++I+ AYE+LS+
Sbjct: 1353 HPDKNPEGREMFERINAAYELLSS 1376
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 35.1 bits (77), Expect = 0.072
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 375 HPDKNPNEGEKFKQISQAYEVLSN 446
HPDKNP E F++I+ AYE+LS+
Sbjct: 1353 HPDKNPEGREMFERINAAYELLSS 1376
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 35.1 bits (77), Expect = 0.072
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 375 HPDKNPNEGEKFKQISQAYEVLSN 446
HPDKNP E F++I+ AYE+LS+
Sbjct: 1353 HPDKNPEGREMFERINAAYELLSS 1376
>U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 24 protein.
Length = 249
Score = 34.7 bits (76), Expect = 0.095
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +3
Query: 282 KETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEG------EKFKQISQAYEVLS 443
+E + Y LG+ E HPDK+ ++ +KFK+I+QAYE+L+
Sbjct: 4 REDSPYITLGISSTSDDVEIKKAYRKLALKWHPDKHTDDKSKEEAEQKFKKIAQAYEILT 63
Query: 444 NPDKRRIYDQ 473
+ KR D+
Sbjct: 64 DKKKRADLDR 73
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 34.7 bits (76), Expect = 0.095
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +3
Query: 297 YDILGVKPNCTTDEXXXXXXXXXXXXHPDKNPNEGE----KFKQISQAYEVLSNPDKRRI 464
Y IL ++ CT E HPDKN + E +F + +A++ L + +KR
Sbjct: 10 YKILHLEKGCTDKEIQKAYRAQCLKWHPDKNLDNKEEAERRFIEAKEAFDFLYDKEKREE 69
Query: 465 YDQGGEQ 485
YD E+
Sbjct: 70 YDNREER 76
>U40029-1|AAA81123.3| 360|Caenorhabditis elegans Serpentine
receptor, class e (epsilon)protein 39 protein.
Length = 360
Score = 31.5 bits (68), Expect = 0.88
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 190 HYYTVFSVKRKTXRILCCTSDRDLCLITNDVLVFHSRI 77
+Y +F + LCC +CLI N V VFHS +
Sbjct: 26 YYAMLFIIIHILLTFLCCLLTIQVCLIINSVRVFHSNM 63
>U97550-3|AAK18981.2| 423|Caenorhabditis elegans Hypothetical
protein T20F7.6 protein.
Length = 423
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 384 KNPNEGEKFKQ---ISQAYEVLSNPDKRRIYDQG 476
K PN+ E F + I+Q YE + + K ++DQG
Sbjct: 32 KTPNDKEAFARLLWINQCYEAMPSSSKMVVFDQG 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,969,485
Number of Sequences: 27780
Number of extensions: 325101
Number of successful extensions: 757
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 716
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 742
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2381234086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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