Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_O21
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0417 - 18896949-18897269,18897340-18897424,18899561-188996...    40   0.004
09_04_0025 - 13882424-13882657                                         31   1.6  
01_01_1167 - 9301114-9301490,9302251-9302808,9303054-9303093           30   2.9  
10_08_0734 + 20195434-20196225                                         29   5.0  
12_02_1094 + 26032135-26032164,26032975-26033152,26033234-260340...    29   6.7  
08_02_0191 + 14041201-14043894,14044354-14044632                       29   6.7  
01_01_0024 - 185516-185676,186459-186735                               28   8.8  

>12_02_0417 -
           18896949-18897269,18897340-18897424,18899561-18899656,
           18900418-18900476,18901285-18901359
          Length = 211

 Score = 39.5 bits (88), Expect = 0.004
 Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = -3

Query: 569 LSPQGLPETRRQFRTHQAPVLDGGGQDLGRVDEQRGLPRRCVDQLHARLGRG*ADHREQD 390
           L+PQ + E  +Q +  QA +L  GGQ + R     G+P+    ++H    RG ADH+   
Sbjct: 132 LTPQQMQE--QQLQQQQAQLLSFGGQMVMRPGVVNGIPQLLQGEMH----RG-ADHQNAG 184

Query: 389 LVTTEIVE--RYTCTHNDGGFQLSD 321
             T+E  E  R T T NDGG    D
Sbjct: 185 GATSEPSESHRSTGTENDGGSDFGD 209


>09_04_0025 - 13882424-13882657
          Length = 77

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = +2

Query: 437 ADLRSVVAGLAARRLGQDPGRLRQEQEPDASETAAWS 547
           A L + VA  AARRLG+D G  RQ+  P  S + A S
Sbjct: 19  ASLNAGVAVAAARRLGEDGGGRRQQPPPLVSVSKASS 55


>01_01_1167 - 9301114-9301490,9302251-9302808,9303054-9303093
          Length = 324

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/32 (46%), Positives = 19/32 (59%)
 Frame = +2

Query: 455 VAGLAARRLGQDPGRLRQEQEPDASETAAWSL 550
           V  L AR L     RLR + EP A+ TAAW++
Sbjct: 76  VQSLKARALKVSERRLRYKLEPPATATAAWTV 107


>10_08_0734 + 20195434-20196225
          Length = 263

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 18/61 (29%), Positives = 26/61 (42%)
 Frame = -3

Query: 617 IGVINETTFSWQGQPELSPQGLPETRRQFRTHQAPVLDGGGQDLGRVDEQRGLPRRCVDQ 438
           +G +  +  S QG          + R   R H+  V DGGG   GRV+E   + +   D 
Sbjct: 109 LGELERSVRSLQGAVAEGRGAKNDGRGGGRRHRRTVSDGGGGGSGRVEESVAVVKESADP 168

Query: 437 L 435
           L
Sbjct: 169 L 169


>12_02_1094 +
           26032135-26032164,26032975-26033152,26033234-26034017,
           26034135-26034216,26034968-26035177
          Length = 427

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 20/64 (31%), Positives = 28/64 (43%)
 Frame = -3

Query: 512 VLDGGGQDLGRVDEQRGLPRRCVDQLHARLGRG*ADHREQDLVTTEIVERYTCTHNDGGF 333
           +L   G  +GRVDE +  PR    +L A       DH +  L+  E+ E Y    +D   
Sbjct: 23  LLGSHGGSIGRVDEAKKSPRASPARLDA--DEDDDDHPKNSLLPQELDEDYPKDQSDSSR 80

Query: 332 QLSD 321
             SD
Sbjct: 81  SRSD 84


>08_02_0191 + 14041201-14043894,14044354-14044632
          Length = 990

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = -3

Query: 572 ELSPQGLPETRRQFRTHQAPVLDGGGQDLGRVDEQRGLPRRCVDQLHARLG 420
           E S  G+P    Q+ TH     D  GQDL    +  G  R+  D++ +RLG
Sbjct: 10  EQSIHGIPIQEMQWTTHGGSD-DCWGQDLSHGGDSVGGARQVFDEMPSRLG 59


>01_01_0024 - 185516-185676,186459-186735
          Length = 145

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 343 MEGFNFLMSKFNLVNFVLAGSSQWVALP 260
           ++GFNF  S F    + +  +S WV +P
Sbjct: 95  LDGFNFWTSPFYFWAYFIGANSSWVVIP 122


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,740,939
Number of Sequences: 37544
Number of extensions: 437242
Number of successful extensions: 992
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)