Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_O21
         (901 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   2.9  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    23   3.8  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   3.8  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   5.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.6  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   8.8  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   8.8  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    22   8.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   8.8  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 788 MRLIRQSQQACPKTXGTSSAVCVLLKE 708
           + L+R +    P   GT + +C LLK+
Sbjct: 659 LALVRDATARLPNGEGTRADICQLLKD 685


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = +3

Query: 342 IVVCTGIAFYNLRRHQVLFPMISSTAAQSSMKLIY 446
           +VVC GIA  ++    V     S+     SMK+IY
Sbjct: 7   LVVCLGIACQDVTSAAVNHQRKSANNLAHSMKVIY 41


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 796 TITNKNALCHVYISHVLIK 852
           T+    A+CH +ISH + K
Sbjct: 149 TVERYIAICHPFISHTMSK 167


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 608 INETTFSWQGQPELSPQG 555
           +NE+  +W G+ +  P+G
Sbjct: 390 VNESNITWPGRLQTKPEG 407


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 361 IPVHTTMEGFNFLMSKFNLVN 299
           IPVH T+E F  L +    +N
Sbjct: 442 IPVHATLEKFMILCNLMRTMN 462


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -3

Query: 896 KCTXIQKRAGSDILHLISTCEIXTWHSAFLFVIVK 792
           KCT IQK+    +    +T E   W+  F+ +++K
Sbjct: 77  KCTEIQKQNLDKLAEWFTTNEPEKWNH-FVEIMIK 110


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = -3

Query: 896 KCTXIQKRAGSDILHLISTCEIXTWHSAFLFVIVK 792
           KCT IQK+    +    +T E   W+  F+ +++K
Sbjct: 77  KCTEIQKQNLDKLAEWFTTNEPEKWNH-FVEIMIK 110


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 580 PCQLKVVSLMTPMLI*NWKQQRRCPY 657
           PC +   SL  P  + N+ ++  C Y
Sbjct: 194 PCNVLATSLTEPYTLRNYGRRINCTY 219


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = +1

Query: 241 AESTTGSVTRPTEMIR-REQN 300
           A  TTG+ T PT  +R R QN
Sbjct: 252 AAMTTGTTTIPTRRLRKRRQN 272


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,825
Number of Sequences: 438
Number of extensions: 4249
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)