Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_O11
         (932 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0065 - 7938007-7938393,7939292-7939435,7940597-7940665,794...    33   0.25 
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677...    31   0.99 
01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647     30   2.3  
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27...    29   4.0  
11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160     29   4.0  
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25...    29   4.0  
01_07_0082 - 40965947-40967023                                         29   4.0  

>11_02_0065 -
           7938007-7938393,7939292-7939435,7940597-7940665,
           7940762-7940809,7941488-7941584,7941688-7941767,
           7941841-7941912,7942256-7942350,7943903-7943984,
           7945176-7945209,7945255-7945262,7945657-7946058
          Length = 505

 Score = 33.5 bits (73), Expect = 0.25
 Identities = 17/36 (47%), Positives = 17/36 (47%)
 Frame = +3

Query: 501 PPPXGXGFFFXGPXPXPPXKXPXPRXXGGGGGFFXP 608
           PPP    FF   P P PP     P   GGGGGF  P
Sbjct: 67  PPPPPAAFFAAVPPPPPPPFEYYP-AVGGGGGFGAP 101



 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/37 (40%), Positives = 15/37 (40%)
 Frame = +1

Query: 499 PPPPGXXGFFFXAXSPXPXKKXXXPGXXGGGXGFSXP 609
           PPPP     FF A  P P          GGG GF  P
Sbjct: 68  PPPPAA---FFAAVPPPPPPPFEYYPAVGGGGGFGAP 101


>01_07_0188 -
           41866689-41866763,41866889-41867155,41867277-41867722,
           41867945-41868033,41868279-41868368,41868661-41868739,
           41868979-41869042,41869597-41869684,41869776-41869836,
           41869906-41869969,41870134-41870188,41870275-41870346,
           41870469-41870551,41870629-41870724,41871279-41871383,
           41872159-41872227,41872470-41872561,41872667-41872886
          Length = 704

 Score = 31.5 bits (68), Expect = 0.99
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 537 PXPXPPXKXPXPRXXGGGGGFF 602
           P P PP   P P+  GGGGG F
Sbjct: 10  PPPPPPQHPPPPQAGGGGGGEF 31



 Score = 29.9 bits (64), Expect = 3.0
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +3

Query: 537 PXPXPPXKXPXPRXXGGGGG 596
           P P PP + P P   GGGGG
Sbjct: 9   PPPPPPPQHPPPPQAGGGGG 28


>01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647
          Length = 252

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
 Frame = +2

Query: 512 GXGVFFXGPXP-LXPXKXXXPPVFXGGGXVFXPPXGGXXFXPKLGGNPXKKFXXXGPXKG 688
           G   F  GP P   P     PP    G     P  G     PK G  P  K    GP   
Sbjct: 149 GDKCFHHGPKPGPKPKPKPSPPKPKPGPKPKPPKPGPKPKPPKPGPKPKPKPPKPGPKPK 208

Query: 689 PKPXK 703
           PKP K
Sbjct: 209 PKPPK 213


>12_01_0033 -
           272848-272943,274026-274169,274264-274375,274521-274702,
           274781-274912,275038-276330,279841-280545,280649-280695,
           280787-280865
          Length = 929

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = +3

Query: 498 PPPPXGXGFFFXGPXPXPPXKXPXPRXXGGG 590
           PPPP G      GP P PP     PR   GG
Sbjct: 626 PPPPPGKP---GGPPPPPPRPGSLPRNLAGG 653


>11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160
          Length = 306

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 513 GXGFFFXGPXPXPPXKXPXPRXXGGGGGFFXPXXG 617
           G  + +  P   PP   P P   GGGGG + P  G
Sbjct: 253 GRVYGYSVPSARPPPLLPPPCYSGGGGGGYTPYCG 287


>11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-256958,
            257038-257169,257297-258589,259133-259837,260465-260549,
            260604-260650,260810-260900,261838-262101,262195-262309,
            262455-262570,262713-262847,262969-263036,263292-263411
          Length = 1235

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = +3

Query: 498  PPPPXGXGFFFXGPXPXPPXKXPXPRXXGGG 590
            PPPP G      GP P PP     PR   GG
Sbjct: 931  PPPPPGKP---GGPPPPPPPPGSLPRNLAGG 958


>01_07_0082 - 40965947-40967023
          Length = 358

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
 Frame = +3

Query: 498 PPPPXGXGFFFXGPXPXPPXKXPXPRXXGG-GGGF-FXPXXGVXXFXQNWGXTXEKN 662
           PPP  G G+    P P      P P    G GGG+ + P  G   + Q      +KN
Sbjct: 256 PPPQYGYGYPAQPPPPQAGYGYPPPPPQAGYGGGYGYPPQAGYGGYQQQAVKPAKKN 312


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,763,561
Number of Sequences: 37544
Number of extensions: 291768
Number of successful extensions: 1108
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)