Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_O11
(932 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.39
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 32 0.67
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 32 0.67
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 32 0.67
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 32 0.67
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 0.89
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 0.89
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 0.89
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 30 2.1
U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical pr... 30 2.7
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 30 2.7
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 28 8.3
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 8.3
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 28 8.3
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 28 8.3
AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical ... 28 8.3
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.39
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +3
Query: 498 PPPPXGXGFFFXGPXPXPPXKXPXPRXXGGGGG 596
PPPP G G + P PP P P G GG
Sbjct: 435 PPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGG 467
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 498 PPPPXGXGFFFXGPX-PXPPXKXPXPRXXGGGGGFFXP 608
P PP G GP P PP P P GGGGG + P
Sbjct: 780 PMPPRG------GPGAPPPPGMRPPPGAPGGGGGMYPP 811
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -1
Query: 650 GXPPILGKTXXPPXGXEKPXPPPXXPGXXXFXXGXGXXAXKKKPXXPGGGG 498
G P+ PP G + P PP PG + P PGGGG
Sbjct: 762 GPSPVPRPAPAPPGGRQAPMPPRGGPG------APPPPGMRPPPGAPGGGG 806
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 498 PPPPXGXGFFFXGPX-PXPPXKXPXPRXXGGGGGFFXP 608
P PP G GP P PP P P GGGGG + P
Sbjct: 780 PMPPRG------GPGAPPPPGMRPPPGAPGGGGGMYPP 811
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -1
Query: 650 GXPPILGKTXXPPXGXEKPXPPPXXPGXXXFXXGXGXXAXKKKPXXPGGGG 498
G P+ PP G + P PP PG + P PGGGG
Sbjct: 762 GPSPVPRPAPAPPGGRQAPMPPRGGPG------APPPPGMRPPPGAPGGGG 806
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 498 PPPPXGXGFFFXGPX-PXPPXKXPXPRXXGGGGGFFXP 608
P PP G GP P PP P P GGGGG + P
Sbjct: 780 PMPPRG------GPGAPPPPGMRPPPGAPGGGGGMYPP 811
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -1
Query: 650 GXPPILGKTXXPPXGXEKPXPPPXXPGXXXFXXGXGXXAXKKKPXXPGGGG 498
G P+ PP G + P PP PG + P PGGGG
Sbjct: 762 GPSPVPRPAPAPPGGRQAPMPPRGGPG------APPPPGMRPPPGAPGGGG 806
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/38 (44%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = +3
Query: 498 PPPPXGXGFFFXGPX-PXPPXKXPXPRXXGGGGGFFXP 608
P PP G GP P PP P P GGGGG + P
Sbjct: 780 PMPPRG------GPGAPPPPGMRPPPGAPGGGGGMYPP 811
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/51 (31%), Positives = 19/51 (37%)
Frame = -1
Query: 650 GXPPILGKTXXPPXGXEKPXPPPXXPGXXXFXXGXGXXAXKKKPXXPGGGG 498
G P+ PP G + P PP PG + P PGGGG
Sbjct: 762 GPSPVPRPAPAPPGGRQAPMPPRGGPG------APPPPGMRPPPGAPGGGG 806
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 0.89
Identities = 25/70 (35%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = +2
Query: 500 PPPXGXGVFFXGPXPLXPXKXXXPPVFXGGGXVFXPPXGGXXFXPKLGGNPXKKFXXXG- 676
PPP G GP P P PP+ GG PP GG P GG P G
Sbjct: 714 PPPPGLPPITGGPPP-PPPPGGLPPI--TGGPPPPPPPGG--LPPISGGPPPPPPPPGGC 768
Query: 677 PXKGPKPXKG 706
P P P G
Sbjct: 769 PPPPPPPPPG 778
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 498 PPPPXGXGFFFXGPXPXPP 554
PPPP G F GP P PP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/66 (33%), Positives = 23/66 (34%)
Frame = +2
Query: 500 PPPXGXGVFFXGPXPLXPXKXXXPPVFXGGGXVFXPPXGGXXFXPKLGGNPXKKFXXXGP 679
PPP G GP P P PP+ GG PP GG P P GP
Sbjct: 730 PPPGGLPPITGGPPP-PPPPGGLPPI-SGGPPPPPPPPGGCPPPPP---PPPPGGFKGGP 784
Query: 680 XKGPKP 697
P P
Sbjct: 785 PPPPPP 790
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +3
Query: 498 PPPPXGXGFFFXGPXPXPPXK--XPXPRXXGGGGGF 599
PPPP G GP P PP P P GGF
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = -1
Query: 650 GXPPILGK--TXXPPXGXEKPXPPPXXPG 570
G PPI G PP G P PPP PG
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 0.89
Identities = 25/70 (35%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = +2
Query: 500 PPPXGXGVFFXGPXPLXPXKXXXPPVFXGGGXVFXPPXGGXXFXPKLGGNPXKKFXXXG- 676
PPP G GP P P PP+ GG PP GG P GG P G
Sbjct: 714 PPPPGLPPITGGPPP-PPPPGGLPPI--TGGPPPPPPPGG--LPPISGGPPPPPPPPGGC 768
Query: 677 PXKGPKPXKG 706
P P P G
Sbjct: 769 PPPPPPPPPG 778
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 498 PPPPXGXGFFFXGPXPXPP 554
PPPP G F GP P PP
Sbjct: 771 PPPPPPPGGFKGGPPPPPP 789
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/66 (33%), Positives = 23/66 (34%)
Frame = +2
Query: 500 PPPXGXGVFFXGPXPLXPXKXXXPPVFXGGGXVFXPPXGGXXFXPKLGGNPXKKFXXXGP 679
PPP G GP P P PP+ GG PP GG P P GP
Sbjct: 730 PPPGGLPPITGGPPP-PPPPGGLPPI-SGGPPPPPPPPGGCPPPPP---PPPPGGFKGGP 784
Query: 680 XKGPKP 697
P P
Sbjct: 785 PPPPPP 790
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +3
Query: 498 PPPPXGXGFFFXGPXPXPPXK--XPXPRXXGGGGGF 599
PPPP G GP P PP P P GGF
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 780
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = -1
Query: 650 GXPPILGK--TXXPPXGXEKPXPPPXXPG 570
G PPI G PP G P PPP PG
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPG 778
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 0.89
Identities = 25/70 (35%), Positives = 26/70 (37%), Gaps = 1/70 (1%)
Frame = +2
Query: 500 PPPXGXGVFFXGPXPLXPXKXXXPPVFXGGGXVFXPPXGGXXFXPKLGGNPXKKFXXXG- 676
PPP G GP P P PP+ GG PP GG P GG P G
Sbjct: 297 PPPPGLPPITGGPPP-PPPPGGLPPI--TGGPPPPPPPGG--LPPISGGPPPPPPPPGGC 351
Query: 677 PXKGPKPXKG 706
P P P G
Sbjct: 352 PPPPPPPPPG 361
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 498 PPPPXGXGFFFXGPXPXPP 554
PPPP G F GP P PP
Sbjct: 354 PPPPPPPGGFKGGPPPPPP 372
Score = 28.3 bits (60), Expect = 8.3
Identities = 22/66 (33%), Positives = 23/66 (34%)
Frame = +2
Query: 500 PPPXGXGVFFXGPXPLXPXKXXXPPVFXGGGXVFXPPXGGXXFXPKLGGNPXKKFXXXGP 679
PPP G GP P P PP+ GG PP GG P P GP
Sbjct: 313 PPPGGLPPITGGPPP-PPPPGGLPPI-SGGPPPPPPPPGGCPPPPP---PPPPGGFKGGP 367
Query: 680 XKGPKP 697
P P
Sbjct: 368 PPPPPP 373
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +3
Query: 498 PPPPXGXGFFFXGPXPXPPXK--XPXPRXXGGGGGF 599
PPPP G GP P PP P P GGF
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGF 363
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = -1
Query: 650 GXPPILGK--TXXPPXGXEKPXPPPXXPG 570
G PPI G PP G P PPP PG
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPPG 361
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 690 GPFXGPXXKNFFXGXPPNFGXNXXPPXGGXKTXPPP 583
GP P G PP FG PP G PPP
Sbjct: 129 GPACAPSAPIIVNGPPPCFGPACPPPCFGPACAPPP 164
>U58758-7|AAO38576.1| 220|Caenorhabditis elegans Hypothetical
protein ZK1127.9d protein.
Length = 220
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/64 (31%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = +2
Query: 503 PPXGXGVFFXGPXPLXPX--KXXXPPVFXGGGXVFXPPXGGXXFXPKLGGNPXKKFXXXG 676
PP G G FF P PP F G G F P F P+ G P +
Sbjct: 43 PPGGAGSFFGVPPAARGRGGPGMAPPGFAGRGRGFATPGMSSGFAPRGRGMPPGRGGYMP 102
Query: 677 PXKG 688
P +G
Sbjct: 103 PYRG 106
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/64 (31%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = +2
Query: 503 PPXGXGVFFXGPXPLXPX--KXXXPPVFXGGGXVFXPPXGGXXFXPKLGGNPXKKFXXXG 676
PP G G FF P PP F G G F P F P+ G P +
Sbjct: 52 PPGGAGSFFGVPPAARGRGGPGMAPPGFAGRGRGFATPGMSSGFAPRGRGMPPGRGGYMP 111
Query: 677 PXKG 688
P +G
Sbjct: 112 PYRG 115
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 29.9 bits (64), Expect = 2.7
Identities = 20/64 (31%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
Frame = +2
Query: 503 PPXGXGVFFXGPXPLXPX--KXXXPPVFXGGGXVFXPPXGGXXFXPKLGGNPXKKFXXXG 676
PP G G FF P PP F G G F P F P+ G P +
Sbjct: 43 PPGGAGSFFGVPPAARGRGGPGMAPPGFAGRGRGFATPGMSSGFAPRGRGMPPGRGGYMP 102
Query: 677 PXKG 688
P +G
Sbjct: 103 PYRG 106
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/68 (30%), Positives = 25/68 (36%)
Frame = +2
Query: 500 PPPXGXGVFFXGPXPLXPXKXXXPPVFXGGGXVFXPPXGGXXFXPKLGGNPXKKFXXXGP 679
PPP G F P P PP+F GG P GG P + G P G
Sbjct: 66 PPPVPNG--FIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGL 123
Query: 680 XKGPKPXK 703
P+P +
Sbjct: 124 GVAPQPPR 131
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +2
Query: 500 PPPXGXGVFFXGPXPLXPXKXXXPPVFXGGGXVFXPPXGGXXFXPKLGG 646
PPP G F P + PP+ GGG PP GG P GG
Sbjct: 133 PPPFGQP-FQQAPQGMFNVPTGPPPLMGGGGDPRGPP-GGMGGPPGHGG 179
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/49 (36%), Positives = 20/49 (40%)
Frame = +2
Query: 500 PPPXGXGVFFXGPXPLXPXKXXXPPVFXGGGXVFXPPXGGXXFXPKLGG 646
PPP G F P + PP+ GGG PP GG P GG
Sbjct: 413 PPPFGQP-FQQAPQGMFNVPTGPPPLMGGGGDPRGPP-GGMGGPPGHGG 459
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3
Query: 513 GXGFFFXGPXPXPPXKXPXPRXXGGGGGFFXPXXG 617
G G + PP P P GGG G+ P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3
Query: 513 GXGFFFXGPXPXPPXKXPXPRXXGGGGGFFXPXXG 617
G G + PP P P GGG G+ P G
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGG 85
>AC024136-3|AAF35959.2| 470|Caenorhabditis elegans Hypothetical
protein F54A3.6 protein.
Length = 470
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 492 KXPPPPXGXGFFFXGPXPXP 551
K PPP G+FF P P P
Sbjct: 321 KPNPPPPSAGYFFQAPPPAP 340
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,732,210
Number of Sequences: 27780
Number of extensions: 192591
Number of successful extensions: 851
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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