Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_O10
         (925 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71261-3|CAA95802.1|  130|Caenorhabditis elegans Hypothetical pr...   156   2e-38
AL132860-11|CAB60517.1|  440|Caenorhabditis elegans Hypothetical...    60   3e-09
AF069986-1|AAC39136.1|  440|Caenorhabditis elegans nitrilase and...    60   3e-09
U53148-1|AAB37071.1|  175|Caenorhabditis elegans Hypothetical pr...    38   0.008
Z81039-4|CAB02776.1|  361|Caenorhabditis elegans Hypothetical pr...    29   3.6  
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr...    29   4.7  

>Z71261-3|CAA95802.1|  130|Caenorhabditis elegans Hypothetical
           protein F21C3.3 protein.
          Length = 130

 Score =  156 bits (379), Expect = 2e-38
 Identities = 68/112 (60%), Positives = 92/112 (82%)
 Frame = +3

Query: 105 DTIFGKILRKEIPANFIYEDEQCVAFNDVNPQAPTHVLVIPRKPIPQLSLADDTDEQLLG 284
           DT+FGKI+RKEIPA  I+ED++ +AF+DV+PQAP H LVIP++ I  L  A D+D  L+G
Sbjct: 20  DTLFGKIIRKEIPAKIIFEDDEALAFHDVSPQAPIHFLVIPKRRIDMLENAVDSDAALIG 79

Query: 285 HLLIVARKVAAQVGLDKTGFRLVVNDGKNGAQSVYHLHIHILGGRQMQWPPG 440
            L++ A KVA Q+G+   G+R+VVN+GK+GAQSV+HLH+H+LGGRQ+QWPPG
Sbjct: 80  KLMVTASKVAKQLGM-ANGYRVVVNNGKDGAQSVFHLHLHVLGGRQLQWPPG 130


>AL132860-11|CAB60517.1|  440|Caenorhabditis elegans Hypothetical
           protein Y56A3A.13 protein.
          Length = 440

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
 Frame = +3

Query: 120 KILRKEIPANFI-YEDEQCVAFNDVNPQAPTHVLVIPRKPIPQLSLADDTDEQLLGHLLI 296
           K  R  IPA+ I Y       F ++ P    HVLV P++ +P+L+  D TD +    L I
Sbjct: 300 KFARFNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLT--DLTDAET-ADLFI 356

Query: 297 VARKVAAQVGL--DKTGFRLVVNDGKNGAQSVYHLHIHILGGR 419
           VA+KV A +    + T   + V DGK+  Q+V H+HIHIL  R
Sbjct: 357 VAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVPHVHIHILPRR 399


>AF069986-1|AAC39136.1|  440|Caenorhabditis elegans nitrilase and
           fragile histidinetriad fusion protein NitFhit protein.
          Length = 440

 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
 Frame = +3

Query: 120 KILRKEIPANFI-YEDEQCVAFNDVNPQAPTHVLVIPRKPIPQLSLADDTDEQLLGHLLI 296
           K  R  IPA+ I Y       F ++ P    HVLV P++ +P+L+  D TD +    L I
Sbjct: 300 KFARFNIPADHIFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLT--DLTDAET-ADLFI 356

Query: 297 VARKVAAQVGL--DKTGFRLVVNDGKNGAQSVYHLHIHILGGR 419
           VA+KV A +    + T   + V DGK+  Q+V H+HIHIL  R
Sbjct: 357 VAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVPHVHIHILPRR 399


>U53148-1|AAB37071.1|  175|Caenorhabditis elegans Hypothetical
           protein C26F1.7 protein.
          Length = 175

 Score = 38.3 bits (85), Expect = 0.008
 Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
 Frame = +3

Query: 159 EDEQCVAFNDVNPQAPTHVLVIPRKPIPQLSLADDTDEQLLGHLLIVARKVAAQVGLDKT 338
           E++ CV  ND+ P+A  H LV+ ++ I + +     D  LL  +    R++  +  L K 
Sbjct: 27  ENKSCVVINDIKPKAKNHYLVLSKQHIAKPTDLTVADVPLLEEMEKTGRELLRE-HLKKK 85

Query: 339 GFRLVVNDG-KNGAQ-----SVYHLHIHIL 410
           G    V D  + G       SV+HLH+HI+
Sbjct: 86  GEADTVEDMLRIGFHLPPLLSVHHLHMHII 115


>Z81039-4|CAB02776.1|  361|Caenorhabditis elegans Hypothetical
           protein C25D7.5 protein.
          Length = 361

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = -3

Query: 716 SVKGIRRGTLQRKNRIVIFINSEHFHIYLPFKPLDF 609
           ++KGI+   ++  N +V+F  +E  H+ +  KP++F
Sbjct: 272 ALKGIKTRNIRETN-VVLFKKNEEIHVRIELKPMEF 306


>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical protein
            F47A4.2 protein.
          Length = 3498

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/29 (48%), Positives = 18/29 (62%)
 Frame = +3

Query: 237  IPQLSLADDTDEQLLGHLLIVARKVAAQV 323
            +PQL + +DTDE  L  LL+   K AA V
Sbjct: 1123 LPQLDVDEDTDEYRLRRLLLFGLKPAANV 1151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,873,823
Number of Sequences: 27780
Number of extensions: 319193
Number of successful extensions: 777
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 744
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)