Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_O09
         (926 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0183 + 28251548-28252009,28252172-28252594                       29   6.9  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.2  
02_01_0251 - 1652356-1652522,1652564-1652608,1652658-1652733,165...    28   9.2  

>05_07_0183 + 28251548-28252009,28252172-28252594
          Length = 294

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +2

Query: 758 CRYLSSGVGRSLQAGLCAXTPPXXPDRCALSGNYRLGVHPGKTXLIPPWHQPLVTG 925
           CR L+S V RS++       PP  P   A  GN        K  ++ P H  L++G
Sbjct: 44  CRALASSVDRSIRLAASCFPPPEHPPPAA--GNAGRDAAFKKRQVMVPGHGGLISG 97


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 303 NESAN---ARGEAVCVLGALPLPRSLTRCAR 386
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>02_01_0251 -
           1652356-1652522,1652564-1652608,1652658-1652733,
           1652976-1653041,1653120-1653238,1653334-1653508,
           1653604-1653881,1654253-1654436,1654455-1654550,
           1654872-1655012,1655091-1655123
          Length = 459

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 17/47 (36%), Positives = 20/47 (42%)
 Frame = -1

Query: 923 RLPGAGARGG*VGFYRDGLQDGSYRIRRXGRXEXGGXXHTAQLGAND 783
           R P +G RGG       G+ DG   +RR GR   GG       G  D
Sbjct: 380 RKPNSGIRGGNYTQLH-GVVDGGIYLRRGGRGRFGGGGRGYARGGGD 425


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,118,606
Number of Sequences: 37544
Number of extensions: 544499
Number of successful extensions: 1477
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1477
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)