Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_O06
(934 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.006
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.006
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.006
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 37 0.018
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 37 0.018
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 37 0.018
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 36 0.041
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 36 0.041
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.7
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 2.7
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 4.8
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 4.8
Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical p... 29 6.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/62 (38%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +2
Query: 725 PXPPPKXPXPXXXGGGXXFXPXRGXXGFPQXGGXPKKIXXXGPXRPNPKXPX-GGFXXGP 901
P PPP P GG P G P GG P G P P P GGF GP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLP--PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 902 PP 907
PP
Sbjct: 785 PP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/62 (38%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +2
Query: 725 PXPPPKXPXPXXXGGGXXFXPXRGXXGFPQXGGXPKKIXXXGPXRPNPKXPX-GGFXXGP 901
P PPP P GG P G P GG P G P P P GGF GP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLP--PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 784
Query: 902 PP 907
PP
Sbjct: 785 PP 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.7 bits (86), Expect = 0.006
Identities = 24/62 (38%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = +2
Query: 725 PXPPPKXPXPXXXGGGXXFXPXRGXXGFPQXGGXPKKIXXXGPXRPNPKXPX-GGFXXGP 901
P PPP P GG P G P GG P G P P P GGF GP
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLP--PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGP 367
Query: 902 PP 907
PP
Sbjct: 368 PP 369
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.1 bits (82), Expect = 0.018
Identities = 28/96 (29%), Positives = 30/96 (31%), Gaps = 5/96 (5%)
Frame = +2
Query: 635 GSXGGXGGFXXXXXXXXXXRGK--GXXFXXPXPXPPPKXPXPXXXGGGXXFXPXRGXXGF 808
G G GF RGK P P PPPK P G P G
Sbjct: 207 GFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP 266
Query: 809 PQXGGXPKKIXXXGPXRP---NPKXPXGGFXXGPPP 907
P+ G P P P +P P G PPP
Sbjct: 267 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.1 bits (82), Expect = 0.018
Identities = 28/96 (29%), Positives = 30/96 (31%), Gaps = 5/96 (5%)
Frame = +2
Query: 635 GSXGGXGGFXXXXXXXXXXRGK--GXXFXXPXPXPPPKXPXPXXXGGGXXFXPXRGXXGF 808
G G GF RGK P P PPPK P G P G
Sbjct: 228 GFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP 287
Query: 809 PQXGGXPKKIXXXGPXRP---NPKXPXGGFXXGPPP 907
P+ G P P P +P P G PPP
Sbjct: 288 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.1 bits (82), Expect = 0.018
Identities = 28/96 (29%), Positives = 30/96 (31%), Gaps = 5/96 (5%)
Frame = +2
Query: 635 GSXGGXGGFXXXXXXXXXXRGK--GXXFXXPXPXPPPKXPXPXXXGGGXXFXPXRGXXGF 808
G G GF RGK P P PPPK P G P G
Sbjct: 213 GFGGQQQGFGQQQQTQNGFRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPP 272
Query: 809 PQXGGXPKKIXXXGPXRP---NPKXPXGGFXXGPPP 907
P+ G P P P +P P G PPP
Sbjct: 273 PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 35.9 bits (79), Expect = 0.041
Identities = 22/63 (34%), Positives = 24/63 (38%)
Frame = -2
Query: 906 GGGPXXNPPXGXXGXGLXGPLXXIFXGXPPXWGKPXXPLXGXKXXPPPXXXGXGXXGGGX 727
GGG PP G G G + G P G+ P G PPP G G GG
Sbjct: 160 GGGDPRGPPGGMGGPPGHGGMG----GPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPG 215
Query: 726 GXG 718
G G
Sbjct: 216 GPG 218
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +2
Query: 737 PKXPXPXXXGGGXXFXPXRGXXGFPQXGGXPKKIXXXGPXRPNPKXPXGGFXXGPPP 907
P P P GGG P G G P GG G P P G GPPP
Sbjct: 151 PTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGP----PGHGGMGGPPP 203
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.9 bits (79), Expect = 0.041
Identities = 22/63 (34%), Positives = 24/63 (38%)
Frame = -2
Query: 906 GGGPXXNPPXGXXGXGLXGPLXXIFXGXPPXWGKPXXPLXGXKXXPPPXXXGXGXXGGGX 727
GGG PP G G G + G P G+ P G PPP G G GG
Sbjct: 440 GGGDPRGPPGGMGGPPGHGGMG----GPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPG 495
Query: 726 GXG 718
G G
Sbjct: 496 GPG 498
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/57 (35%), Positives = 20/57 (35%)
Frame = +2
Query: 737 PKXPXPXXXGGGXXFXPXRGXXGFPQXGGXPKKIXXXGPXRPNPKXPXGGFXXGPPP 907
P P P GGG P G G P GG G P P G GPPP
Sbjct: 431 PTGPPPLMGGGGDPRGPPGGMGGPPGHGGMGGPPGHGGQGGP----PGHGGMGGPPP 483
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/70 (32%), Positives = 23/70 (32%)
Frame = +2
Query: 695 GKGXXFXXPXPXPPPKXPXPXXXGGGXXFXPXRGXXGFPQXGGXPKKIXXXGPXRPNPKX 874
GKG PPP P P G G G P G P GP P P
Sbjct: 147 GKGAAAPCEPSTPPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSP-----AGPSGPGPAG 201
Query: 875 PXGGFXXGPP 904
P G GPP
Sbjct: 202 PPG--PAGPP 209
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 719 PXPXPPPKXPXPXXXGGGXXFXPXRGXXGFPQXGG 823
P P PPP P P GGG G G GG
Sbjct: 305 PPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGG 339
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +2
Query: 719 PXPXPPPKXPXPXXXGGGXXFXPXRGXXGFPQXGG 823
P P PPP P P GGG G G GG
Sbjct: 305 PPPPPPPPAPAPVSSGGGYSEQSSGGGGGSSYSGG 339
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 7/70 (10%)
Frame = +2
Query: 719 PXPXPPPKXPXPXXXG-GGXXFXPXRGXXGFPQXGGXPK------KIXXXGPXRPNPKXP 877
P P PPP P G G P G P GG P + P P P+ P
Sbjct: 297 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 356
Query: 878 XGGFXXGPPP 907
G PPP
Sbjct: 357 SAGPGMYPPP 366
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.7
Identities = 22/70 (31%), Positives = 24/70 (34%), Gaps = 7/70 (10%)
Frame = +2
Query: 719 PXPXPPPKXPXPXXXG-GGXXFXPXRGXXGFPQXGGXPK------KIXXXGPXRPNPKXP 877
P P PPP P G G P G P GG P + P P P+ P
Sbjct: 307 PPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYP 366
Query: 878 XGGFXXGPPP 907
G PPP
Sbjct: 367 SAGPGMYPPP 376
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Frame = +2
Query: 731 PPPKXPXPXXXGG-GXXFXPXRGXXGFPQXGGXPKKIXXXGPXRPNPKXPXGGFXXGPPP 907
PP P GG G P G G P G P+ GP P P G GPPP
Sbjct: 393 PPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQ----GGPGGFGPPPPGGPGAYGPPP 448
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = +2
Query: 731 PPPKXPXPXXXGGGXXFXPXRGXXGFPQXGGXPKKIXXXGPXRPNPKXPXGGFXXGPPP 907
PPP P P GG + G P G P++ P P P G PPP
Sbjct: 296 PPPSGP-PSEYGGYAPPQQQQQQFGAPPPQGAPQQGFGAPPQGPPQGGPPQGSFGAPPP 353
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/71 (28%), Positives = 25/71 (35%)
Frame = +2
Query: 695 GKGXXFXXPXPXPPPKXPXPXXXGGGXXFXPXRGXXGFPQXGGXPKKIXXXGPXRPNPKX 874
G G + PPP P P GGG + G G P G + GP +
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGGPG-PVGGASYSQ----GPQGFGGQV 105
Query: 875 PXGGFXXGPPP 907
G + GP P
Sbjct: 106 GGGAYQAGPGP 116
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.8
Identities = 20/71 (28%), Positives = 25/71 (35%)
Frame = +2
Query: 695 GKGXXFXXPXPXPPPKXPXPXXXGGGXXFXPXRGXXGFPQXGGXPKKIXXXGPXRPNPKX 874
G G + PPP P P GGG + G G P G + GP +
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGGPG-PVGGASYSQ----GPQGFGGQV 105
Query: 875 PXGGFXXGPPP 907
G + GP P
Sbjct: 106 GGGAYQAGPGP 116
>Z70783-10|CAC70122.1| 1037|Caenorhabditis elegans Hypothetical
protein ZK856.13 protein.
Length = 1037
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1
Query: 217 GILQGIETK*FNNYLHANGSGNKRKNDE 134
GI+ GI+TK LH NGSGN+++ +E
Sbjct: 45 GIIAGIDTKPHLTGLH-NGSGNRKRVEE 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,358,205
Number of Sequences: 27780
Number of extensions: 270183
Number of successful extensions: 1014
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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