Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_O04
         (951 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0388 + 23726957-23727418,23730016-23730262,23731072-237312...    29   4.1  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   4.1  
07_03_0792 - 21541301-21542143,21542426-21542661,21543177-215433...    29   5.4  
07_03_1788 + 29523216-29524867,29525048-29525075                       28   9.5  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    28   9.5  

>03_05_0388 +
           23726957-23727418,23730016-23730262,23731072-23731220,
           23731313-23731597,23731665-23731889,23734251-23734445
          Length = 520

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +3

Query: 417 PPXXXKXXPXXXPPXGGGGGXXXXFXPXKKKKXFFXPP 530
           PP      P   PP G G G    F P + +  ++ PP
Sbjct: 306 PPQPWGPPPSHLPPGGPGYGGHPQFMPPRPQDNYYPPP 343


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +2

Query: 371 PPPXKXXXGKKKXXXXPPXXKKXPPXXPPXGGG 469
           PPP     G       PP  KK  P  PP  GG
Sbjct: 353 PPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385


>07_03_0792 -
           21541301-21542143,21542426-21542661,21543177-21543373,
           21543459-21544173,21544250-21544892,21545970-21546139,
           21546442-21546943
          Length = 1101

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/54 (29%), Positives = 16/54 (29%)
 Frame = +2

Query: 374 PPXKXXXGKKKXXXXPPXXKKXPPXXPPXGGGGGXXXXXXPXKKKKXXFFXPPP 535
           PP K           PP  K  PP  PP   G G      P          PPP
Sbjct: 577 PPLKASPVPPPEPSPPPAPKAAPPPPPPKSTGPGPPRPPPPAMPGSSKTRPPPP 630


>07_03_1788 + 29523216-29524867,29525048-29525075
          Length = 559

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = +3

Query: 375 PPKXXXXXKKKXXXPPXXXKXXPXXXPPXGGGGG 476
           PPK      +K   PP      P   PP G G G
Sbjct: 18  PPKRGRGRPRKNPPPPPPPATDPNPHPPSGAGAG 51


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 17/55 (30%), Positives = 18/55 (32%)
 Frame = +2

Query: 371  PPPXKXXXGKKKXXXXPPXXKKXPPXXPPXGGGGGXXXXXXPXKKKKXXFFXPPP 535
            PPP     G       P      PP  PP GG GG      P   +      PPP
Sbjct: 1099 PPPPSIGAGAPPPPPPPGGITGVPPP-PPIGGLGGHQAPPAPPLPEGIGGVPPPP 1152


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,795,650
Number of Sequences: 37544
Number of extensions: 283758
Number of successful extensions: 868
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)