Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_O03
(924 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 45 2e-05
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 41 3e-04
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 40 4e-04
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 40 7e-04
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 40 7e-04
SPAC19G12.05 |||mitochondrial citrate transporter|Schizosaccharo... 39 9e-04
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 38 0.002
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 36 0.006
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 36 0.011
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 35 0.019
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 34 0.033
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 33 0.075
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 32 0.13
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 31 0.23
SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 31 0.30
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 30 0.40
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 30 0.53
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 30 0.53
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 29 0.70
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 29 1.2
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 28 1.6
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 2.8
SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3 |Schi... 27 4.9
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 26 8.6
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 44.8 bits (101), Expect = 2e-05
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 28/164 (17%)
Frame = +1
Query: 316 FIYGGLASIVAEFGTFPIDTTKTRL-QIQGQKIDPR-------HVELRIWPA-------- 447
FI GG+A IV+ T P+D K L G K P+ H +W
Sbjct: 131 FISGGIAGIVSRTCTAPLDRLKVMLISDTGSKPSPKYPFATLLHTTKVLWNRNGIRSFFV 190
Query: 448 -----VLRQATYGTIKFGTYYTLKNALAKRRADGGTKEHLPTNTFCA-AFAGGLSSAIAN 609
VL+ +IKFGTY +K L ++ H P ++ A AG ++
Sbjct: 191 GNGINVLKVMPESSIKFGTYEAMKRVLG---ISSSSENHSPLYSYLAGGMAGSVAQMFIY 247
Query: 610 PTDVLKVRMQMGEEKRN------LVRCFLDIYRTEGRGGLWRGV 723
P D LK R+Q + R ++ ++Y++ G G +RGV
Sbjct: 248 PVDTLKFRIQCSDLSRGQHGKSIILSNAKELYKSVGIRGYYRGV 291
Score = 35.9 bits (79), Expect = 0.008
Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 31/169 (18%)
Frame = +1
Query: 316 FIYGGLASIVAEFGTFPIDTTKTRLQI----QGQ----------KIDPRHVELR-----I 438
++ GG+A VA+ +P+DT K R+Q +GQ K + V +R +
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSRGQHGKSIILSNAKELYKSVGIRGYYRGV 291
Query: 439 WPAVLRQATYGTIKFGTYYTLKNA----LAKRRADGGTKEHLPTNTFCA--AFAGGLSSA 600
+L Y GT+ LK LA R LP A A +G +
Sbjct: 292 LVGILGMFPYSATDLGTFEGLKRTWIGILASRDNVDPQDVKLPNGLVMAFGALSGSTGAT 351
Query: 601 IANPTDVLKVRMQ-MGEEKR-----NLVRCFLDIYRTEGRGGLWRGVGP 729
I P +V++ R+Q G + CF + EG GL++G+ P
Sbjct: 352 IVFPLNVIRTRLQTQGTSAHPATYDGFIDCFYKTTKNEGFRGLYKGLSP 400
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 40.7 bits (91), Expect = 3e-04
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Frame = +1
Query: 325 GGLASIVAEFGTFPIDTTKTRLQIQG--QKIDPRHVELRIWPAVLRQATYG-TIKFGTYY 495
G A + + FPIDT KTRLQ +G K H R ++L + G ++ F TY
Sbjct: 89 GICAGLAVDLSLFPIDTLKTRLQAKGGFVKNGGFHGVYRGLGSILVGSAPGASLFFTTYE 148
Query: 496 TLKNALAKRRADGGTKEHLPTNTFCAAFAGGLSSAIAN-PTDVLKVRMQ 639
+K+ L++ G P C+A G +++ I PT+V+K R Q
Sbjct: 149 NMKSRLSQ----SGLGLSDPQIHMCSASLGEIAACIVRVPTEVIKQRAQ 193
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 40.3 bits (90), Expect = 4e-04
Identities = 31/117 (26%), Positives = 51/117 (43%)
Frame = +1
Query: 298 ERNWRPFIYGGLASIVAEFGTFPIDTTKTRLQIQGQKIDPRHVELRIWPAVLRQATYGTI 477
E W+P + GGL+ +VAE FP+ T TR+Q ++ L T+
Sbjct: 5 EVQWKPILVGGLSGLVAETLVFPLSTIITRVQ-SSLSFQQAGGFQHLYRG-LSSVLVSTL 62
Query: 478 KFGTYYTLKNALAKRRADGGTKEHLPTNTFCAAFAGGLSSAIANPTDVLKVRMQMGE 648
+ + AK R G + HL + A+ A +S I P +V++ R Q+ +
Sbjct: 63 PSASSFFFVYEYAKARQKPGVRNHLVS----ASVAEVVSCGILAPAEVVRQRAQISK 115
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 39.5 bits (88), Expect = 7e-04
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Frame = +1
Query: 472 TIKFGTYYTLKNALAKRRADGGTKEHLPTNTFCAAFAGGLSSAIANPTDVLKVRMQMGEE 651
+I F +Y K LA +G +E+ + AA AG ++SA NP ++K R+Q+ ++
Sbjct: 138 SINFFSYGNGKRILADLFNNG--QENSQIHLMAAAIAGVITSAATNPIWLVKTRLQLDKK 195
Query: 652 K------RNLVRCFLDIYRTEGRGGLWRGV 723
R+ + C + R EG GL++G+
Sbjct: 196 SGQAAQYRSSIDCIIKTIRLEGFRGLYKGL 225
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 316 FIYGGLASIVAEFGTFPIDTTKTRLQ 393
FI GG+A ++ T P+D KTRLQ
Sbjct: 52 FIAGGVAGMLGAIATAPLDVVKTRLQ 77
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 39.5 bits (88), Expect = 7e-04
Identities = 37/143 (25%), Positives = 56/143 (39%), Gaps = 7/143 (4%)
Frame = +1
Query: 316 FIYGGLASIVAEFGTFPIDTTKTRLQIQGQKIDPRHVELRIWPAVLRQATYGTIKFGTYY 495
F+ G A I A ++P+DT +T+ + +I+ + + +KF
Sbjct: 108 FLCGTSAGIFATLTSYPLDTMRTKFASYAKTPHMLPATKKIYAEAGIKGFFPGLKFSVIQ 167
Query: 496 TLKNA---LAKRRADGGTKEHLP---TNTFCAAFAGGLSSAIANPTD-VLKVRMQMGEEK 654
A RA L ++T AG S AI P D V+K
Sbjct: 168 IGPYAGCFFMFYRASEAVLSPLGLALSSTLSGVIAGAGSKAIMFPVDTVVKTLQTFPSNY 227
Query: 655 RNLVRCFLDIYRTEGRGGLWRGV 723
++ CFL IYR G GL+RG+
Sbjct: 228 KSFKDCFLSIYRNSGIKGLYRGL 250
Score = 38.3 bits (85), Expect = 0.002
Identities = 35/150 (23%), Positives = 60/150 (40%), Gaps = 11/150 (7%)
Frame = +1
Query: 307 WRPFIYGGLASIVAEFGTFPIDTTKTRLQIQGQKIDPRHVEL-------RIW----PAVL 453
W + GG++S++ F P D K R+QI + P E +W A L
Sbjct: 17 WHYTLAGGISSVICRFMIAPFDVIKIRMQITQSSLRPVFKETVQKEGVRALWRGNVVAEL 76
Query: 454 RQATYGTIKFGTYYTLKNALAKRRADGGTKEHLPTNTFCAAFAGGLSSAIANPTDVLKVR 633
YG +F + LK+ L + A +H N C AG ++ + P D ++ +
Sbjct: 77 LYLVYGAAEFVAFSKLKH-LTENLA---MNDH-AVNFLCGTSAGIFATLTSYPLDTMRTK 131
Query: 634 MQMGEEKRNLVRCFLDIYRTEGRGGLWRGV 723
+ +++ IY G G + G+
Sbjct: 132 FASYAKTPHMLPATKKIYAEAGIKGFFPGL 161
>SPAC19G12.05 |||mitochondrial citrate
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 291
Score = 39.1 bits (87), Expect = 9e-04
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Frame = +1
Query: 448 VLRQATYGTIKFGTYYTLKNALAKRRADGGTKEHLPTNTFCAAFAGGLSSAIANPTDVLK 627
V RQA ++F Y ++K +L + R K T + AG ++ P D +K
Sbjct: 170 VARQAANSGVRFTAYNSIKQSL-QSRLPPDEKLSTVTTFLVGSVAGIITVYCTQPIDTVK 228
Query: 628 VRMQM---GEEKRNLVRCFLDIYRTEGRGGLWRGVGP 729
RMQ +E +N + C I +G W G P
Sbjct: 229 SRMQSLSASKEYKNSIHCAYKILTQDGLLRFWSGATP 265
Score = 30.3 bits (65), Expect = 0.40
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 316 FIYGGLASIVAEFGTFPIDTTKTRLQ 393
F+ G +A I+ + T PIDT K+R+Q
Sbjct: 207 FLVGSVAGIITVYCTQPIDTVKSRMQ 232
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 38.3 bits (85), Expect = 0.002
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Frame = +1
Query: 574 AFAGGLSSAIANPTDVLKVRMQM--GEEKR---NLVRCFLDIYRTEGRGGLWRGV 723
AF+G L ++ P D +K RMQM G + N+V + I TEG LWRG+
Sbjct: 27 AFSGILEHSVMYPVDAIKTRMQMLNGVSRSVSGNIVNSVIKISSTEGVYSLWRGI 81
Score = 35.1 bits (77), Expect = 0.014
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Frame = +1
Query: 553 PTNTFCAAFAGG----LSSAIANPTDVLKVRMQMGEEK-RNLVRCFLDIYRTEGRGGLW 714
P +A AG +S A P DV+K RMQ+ K ++ + C ++R EG G +
Sbjct: 110 PDRPLASALAGACAITISDAFMTPFDVIKQRMQLPSRKYKSALHCATTVFRNEGLGAFY 168
Score = 29.1 bits (62), Expect = 0.93
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +1
Query: 319 IYGGLASIVAEFGTFPIDTTKTRLQIQGQKIDP 417
I GGL+ +A T P+D KT LQ +G P
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRGSSSIP 241
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 36.3 bits (80), Expect = 0.006
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 553 PTNTFCAAF-AGGLSSAIANPTDVLKVRMQMGEEKRNLVRCFLDIYRTEGRGGLWRGV 723
P +TF AA + +S+ I P D +KVR Q + CF + + EG GL+RG+
Sbjct: 17 PASTFSAALVSSAISNVIGYPLDSIKVRQQTYNFP-TIRSCFQNAVKNEGLKGLYRGL 73
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/68 (25%), Positives = 23/68 (33%)
Frame = +1
Query: 436 IWPAVLRQATYGTIKFGTYYTLKNALAKRRADGGTKEHLPTNTFCAAFAGGLSSAIANPT 615
+W T + Y+T+ K K H F AF G LS + P
Sbjct: 177 LWNGYRYHLTRDALGSACYFTIYETFKKNLIANDVKPHF-AYAFSGAFCGALSWILVFPV 235
Query: 616 DVLKVRMQ 639
D K +Q
Sbjct: 236 DTAKSIVQ 243
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 35.5 bits (78), Expect = 0.011
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Frame = +1
Query: 565 FCAAFAGGLSSAIANPTDVLKVRMQM------GEEKRNLVRCFLDIYRTEGRGGLWRG 720
F F G + + P DVL+ R Q+ G +N+ IY+TEG G +RG
Sbjct: 231 FLGGFTGIIGQTLTFPADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEGINGFFRG 288
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 34.7 bits (76), Expect = 0.019
Identities = 41/160 (25%), Positives = 63/160 (39%), Gaps = 21/160 (13%)
Frame = +1
Query: 316 FIYGGLASIVAEFGTFPIDTTKTRLQIQGQKID----------------PRHVELRIWPA 447
F G +A I +P+D KTR+Q+ K D P + I P
Sbjct: 12 FAAGAVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPP 71
Query: 448 VLRQATYGTIKFGTYYTLKNALAK--RRADGGTKEHLPTNTFCAAFAGGLSSAIANPTDV 621
+L +A +KF + T K +R D + T + CA F + + P ++
Sbjct: 72 ILMEAPKRALKFASNDTYSKLWRKVFKRKDSSPALSILTGS-CAGFT---ETFVVVPFEL 127
Query: 622 LKVRMQ--MGEEKRN-LVRCFLDIYRTEGRGGLWRGVGPT 732
+K+R+Q K N V CF I + E L+ G T
Sbjct: 128 MKIRLQDVKNASKYNGTVDCFTKIVKQERILALYNGFEAT 167
Score = 33.9 bits (74), Expect = 0.033
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +1
Query: 562 TFCAAFAGGLSSAIA-NPTDVLKVRMQMGEEK---RNLVRCFLDIYRTEGRGGLWRGVGP 729
TF A G+S + P DV+K RMQ+ K C I + EG L+RG+ P
Sbjct: 11 TFAAGAVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILP 70
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 33.9 bits (74), Expect = 0.033
Identities = 18/36 (50%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 316 FIYGGLASIVAEFGTFPIDTTKTRLQIQGQ--KIDP 417
F+ GGLA+ A T P + KTR Q+QGQ K+DP
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDP 62
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 32.7 bits (71), Expect = 0.075
Identities = 35/160 (21%), Positives = 58/160 (36%), Gaps = 12/160 (7%)
Frame = +1
Query: 292 MGERNWRPFIYGGLASIVAEFGTFPIDTTKTRLQIQGQKIDPRHVE---------LRIWP 444
+G ++ + G L ++ P+D KTR Q + P+ V +W
Sbjct: 10 LGVKSSKHLAAGALGGFISSTTLQPLDLLKTRCQQSQRDSLPKMVRRIILHEGGVFSLWK 69
Query: 445 AVLRQATYGTIKFGTYYTLKNALAK--RRADGGTKEHLPTNTFCAAFAGGLSSAIANPTD 618
L T Y+ N L ++ H+ N + FA P
Sbjct: 70 GTLPSILRSTTGSSCYFYFLNWLRHFAPQSKNIASSHIQ-NLWMGGFARAAVGFAFMPVT 128
Query: 619 VLKVRMQMGEEKRNLVRCFL-DIYRTEGRGGLWRGVGPTS 735
V+KVR + + + DI++ EG G +RG G T+
Sbjct: 129 VIKVRYESNLYSYTTIYSSIRDIWKKEGISGFFRGFGVTA 168
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 31.9 bits (69), Expect = 0.13
Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 5/100 (5%)
Frame = +1
Query: 442 PAVLRQATYGTIKFGTYYTLKNAL----AKRRADGGTKEHLPTNTFCAAFAGGLSSAIAN 609
P RQ Y +KF ++ + AL K + E + + AG L + I++
Sbjct: 181 PLWFRQIPYTMMKFASFERIVEALYTYIGKPKNMYSKAEKIGISFAGGYMAGVLCAIISH 240
Query: 610 PTDVLKVRMQMGEEK-RNLVRCFLDIYRTEGRGGLWRGVG 726
P DV+ ++ ++ IY+ G GLW G+G
Sbjct: 241 PADVMVSKLNSNKKAGEGAGAAAARIYKEIGFSGLWNGLG 280
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 316 FIYGGLASIVAEFGTFPIDTTKTRLQIQGQKIDPRHVELRIW 441
F+ GG++ +A T P D +KT Q+ G + L +W
Sbjct: 250 FVSGGISGTLATLLTQPFDVSKTAKQVHGHTLTRGQFMLTLW 291
>SPBP18G5.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 430
Score = 30.7 bits (66), Expect = 0.30
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +1
Query: 250 VLNNIKL*HCISRVMGERNWRPFIYGGLASIVAEFGTFPIDTTKTRLQIQGQKIDPRHVE 429
V NI++ ++ E N + +IY S+ + +FPI R+ I + +PR E
Sbjct: 70 VQGNIEISEEPQKLFQEENVKVYIYDSAISLSSVRASFPISELGIRMDIIKARAEPREDE 129
Query: 430 LR 435
+R
Sbjct: 130 IR 131
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 30.3 bits (65), Expect = 0.40
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Frame = +1
Query: 562 TFCAA-FAGGLSSAIANPTDVLKVR-MQMGEEKRNLVRCFLDIYRTEGRGGLWRGVGPT 732
T C++ FAG + +A+ NP V+K R + N F D+ + EG G + G P+
Sbjct: 101 TLCSSGFAGCIVAALTNPIWVVKSRILSKRVNYTNPFFGFYDLIKNEGLRGCYAGFAPS 159
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 29.9 bits (64), Expect = 0.53
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 9/102 (8%)
Frame = +1
Query: 451 LRQATYGTIKFGTYYTLKNALAKR-RADGGTKEHLPTNT---FCAAFAGGLSSAIANPTD 618
LRQ T +G+ L L K R G E P T F A+ + G S P +
Sbjct: 171 LRQMT----NWGSRLALSRFLEKPIRYFTGRTEAEPLTTGQRFVASVSAGALSCWNQPLE 226
Query: 619 VLKVRMQ-----MGEEKRNLVRCFLDIYRTEGRGGLWRGVGP 729
V +V MQ + +++ + IY+ G GL+RG P
Sbjct: 227 VARVEMQSLTKGIQHSSPGIMQTIMSIYKNNGIKGLYRGAVP 268
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 643 GEEKRNLVRCFLDIYRTEGRGGLWRGV 723
G+E + R F D+Y+ +G G+ RGV
Sbjct: 140 GQEVKGTFRVFADLYKEKGIRGINRGV 166
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 29.9 bits (64), Expect = 0.53
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Frame = +1
Query: 580 AGGLSSAIANPTDVLKVRMQM-------GEEKRNLV-----RCFLDIYRTEGRGGLWRGV 723
AG SS + P DV+K R Q G K +V I+ EG GL+RGV
Sbjct: 15 AGLASSLVVAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGV 74
Query: 724 GP 729
GP
Sbjct: 75 GP 76
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 29.5 bits (63), Expect = 0.70
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 307 WRPFIYGGLASIVAEFGTFPIDTTKTRLQ 393
+R I G LA A F T P+D KTRLQ
Sbjct: 215 FRELITGSLAGAGAGFLTTPLDVAKTRLQ 243
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 643 GEEKRN-LVRCFLDIYRTEGRGGLWRGVGPT 732
GE + N LV + YR++G GL+RG GP+
Sbjct: 171 GERQFNGLVDVYRKTYRSDGLRGLYRGFGPS 201
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +1
Query: 568 CAAFAGGLSSAIANPTDVLKVRMQMGEEKRN 660
C AFAG ++ P +V + +MQ+G ++N
Sbjct: 242 CGAFAGVCGQTVSYPFEVCRRKMQIGGIRKN 272
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -2
Query: 722 TPRHSPPRPSVRYMSRKQRTRLRFSSPICIRTFSTSVG 609
TP PPRPS Q T RF P ++F SVG
Sbjct: 239 TPPPPPPRPSQPTSGESQNTNPRF--PFSAQSFVFSVG 274
>SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 970
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -1
Query: 621 YVGRVGNSTGQSTRKGSTESVRREVLLRSTVRSSLGERVLQRIVGTKLNRAI 466
YVG V N+T ++ GS ++V + R + R R+VG ++ AI
Sbjct: 374 YVGHVDNATIAQSKGGSQQTVLLTPMDRRVPKIRFRTRQAPRLVGRRIVVAI 425
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 25.8 bits (54), Expect = 8.6
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 340 IVAEFGTFPIDTTKTRLQ--IQGQKIDPRHVELRIW 441
IV GTFP T + + ++D RHVEL +W
Sbjct: 24 IVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALW 59
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,183,030
Number of Sequences: 5004
Number of extensions: 64169
Number of successful extensions: 234
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 467341524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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