Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_O03
         (924 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    26   0.56 
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    26   0.56 
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          23   5.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   6.8  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   6.8  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   9.0  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   9.0  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 25.8 bits (54), Expect = 0.56
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 310 RPFIYGGLASIVAEFGTFPIDTTKTRLQIQ 399
           + F+ GG+A+ +++    PI+  K  LQ+Q
Sbjct: 12  KDFLAGGVAAAISKTTVAPIERVKLLLQVQ 41



 Score = 25.8 bits (54), Expect = 0.56
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
 Frame = +1

Query: 589 LSSAIANPTDVLKVRMQM--GEEK-----RNLVRCFLDIYRTEGRGGLWRG 720
           ++  ++ P D ++ RM M  G  K     ++ + C+  IY+TEG    ++G
Sbjct: 225 VAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275



 Score = 25.4 bits (53), Expect = 0.73
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 13/60 (21%)
 Frame = +1

Query: 580 AGGLSSAIANPT-----------DVLKVRMQMGEEKR--NLVRCFLDIYRTEGRGGLWRG 720
           AGG+++AI+  T            V  +  Q+ EE+R   ++ CF+ I + +G    WRG
Sbjct: 16  AGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRG 75


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 25.8 bits (54), Expect = 0.56
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 310 RPFIYGGLASIVAEFGTFPIDTTKTRLQIQ 399
           + F+ GG+A+ +++    PI+  K  LQ+Q
Sbjct: 12  KDFLAGGVAAAISKTTVAPIERVKLLLQVQ 41



 Score = 25.8 bits (54), Expect = 0.56
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
 Frame = +1

Query: 589 LSSAIANPTDVLKVRMQM--GEEK-----RNLVRCFLDIYRTEGRGGLWRG 720
           ++  ++ P D ++ RM M  G  K     ++ + C+  IY+TEG    ++G
Sbjct: 225 VAGIVSYPFDTVRRRMMMQSGRAKSEILYKSTLHCWATIYKTEGGNAFFKG 275



 Score = 25.4 bits (53), Expect = 0.73
 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 13/60 (21%)
 Frame = +1

Query: 580 AGGLSSAIANPT-----------DVLKVRMQMGEEKR--NLVRCFLDIYRTEGRGGLWRG 720
           AGG+++AI+  T            V  +  Q+ EE+R   ++ CF+ I + +G    WRG
Sbjct: 16  AGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKEQGFLSYWRG 75


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 618 RTKSADADGRGEAQPGALLPGH 683
           R +S D  GRG ++   ++P H
Sbjct: 312 RERSRDRRGRGRSREHRIIPSH 333


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 48  QNLKDSL*CXCNWK 7
           + +KDS  C C WK
Sbjct: 143 KRVKDSTNCNCGWK 156


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 277 CISRVMGERNWRPFIYGGLASIV 345
           C + V   + W PF +GG+  +V
Sbjct: 548 CSAPVWRFQPWGPFTWGGIGVVV 570


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -3

Query: 661  GCASPRPSASAL 626
            GCASP P+A+++
Sbjct: 1750 GCASPPPAATSM 1761


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -3

Query: 661  GCASPRPSASAL 626
            GCASP P+A+++
Sbjct: 1746 GCASPPPAATSM 1757


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,312
Number of Sequences: 438
Number of extensions: 4696
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)