Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_N21
         (912 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0862 + 21979932-21980057,21982221-21982289,21982394-21982603     33   0.31 
03_03_0074 + 14278725-14278934,14279045-14279806                       32   0.73 
08_02_0432 - 17103230-17103322,17103403-17103542,17104950-171052...    31   0.96 
01_06_0247 + 27851206-27851255,27851382-27851496,27852280-278524...    31   0.96 
01_01_0772 - 5999333-5999881,6001105-6001315,6001791-6001858           31   1.7  
03_05_0220 + 22063411-22063468,22063535-22063545,22064478-220646...    29   3.9  
03_03_0078 + 14287889-14288098,14289404-14289649                       29   5.1  

>08_02_0862 + 21979932-21980057,21982221-21982289,21982394-21982603
          Length = 134

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 10/48 (20%), Positives = 23/48 (47%)
 Frame = -2

Query: 377 HHIRLGCHQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHHIRPD 234
           +H+    H++     H+  D++H+  D   +  D   +  D++H+  D
Sbjct: 71  NHVSRDTHEVSCDICHVSDDFYHVSRDTREVSCDTCQVSDDFYHVSRD 118



 Score = 31.5 bits (68), Expect = 0.96
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -2

Query: 335 HHIRPDYHHIRLDCHHIRLDCHHIRLDYHHIRPD 234
           + +  D++H+  D H +  D  H+  D++H+  D
Sbjct: 64  YQVSDDFNHVSRDTHEVSCDICHVSDDFYHVSRD 97



 Score = 28.3 bits (60), Expect = 9.0
 Identities = 10/41 (24%), Positives = 20/41 (48%)
 Frame = -2

Query: 356 HQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHHIRPD 234
           +Q+   ++H+  D H +  D  H+  D +H+  D   +  D
Sbjct: 64  YQVSDDFNHVSRDTHEVSCDICHVSDDFYHVSRDTREVSCD 104


>03_03_0074 + 14278725-14278934,14279045-14279806
          Length = 323

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +1

Query: 73  SASVLKMKITIACLILIVTACYGYPYGYGHES 168
           +AS +K+ + +AC + + +AC+G   GY  +S
Sbjct: 2   AASGMKLAVAVACALALASACHGLQLGYYKQS 33


>08_02_0432 -
           17103230-17103322,17103403-17103542,17104950-17105211,
           17105391-17105495,17105496-17105558,17106876-17107022
          Length = 269

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 10/48 (20%), Positives = 23/48 (47%)
 Frame = -2

Query: 377 HHIRLGCHQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHHIRPD 234
           +H+     ++      +  D++H+  D H +  D  H+  D++H+  D
Sbjct: 55  YHVSRDTREVSCETCQVSDDFNHVLRDTHEVLCDTCHVSGDFYHVSRD 102


>01_06_0247 +
           27851206-27851255,27851382-27851496,27852280-27852468,
           27853698-27854057,27854138-27854201,27854365-27854504,
           27854610-27854918,27855135-27855389
          Length = 493

 Score = 31.5 bits (68), Expect = 0.96
 Identities = 9/48 (18%), Positives = 24/48 (50%)
 Frame = -2

Query: 377 HHIRLGCHQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHHIRPD 234
           +H+     ++    + +  +++H+  D H +  D  H+  D++H+  D
Sbjct: 61  YHVSRDTREVSCETYQVPDNFNHVSRDTHEVSCDTCHVLDDFYHVSRD 108


>01_01_0772 - 5999333-5999881,6001105-6001315,6001791-6001858
          Length = 275

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 10/51 (19%), Positives = 23/51 (45%)
 Frame = -2

Query: 377 HHIRLGCHQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHHIRPDCHH 225
           +H+     ++   ++H+  D H +  D   +  D +H+  D   +  D +H
Sbjct: 29  YHVSRDTRKVSYDFNHVSRDTHEVSCDTCRVSDDFYHVSRDTRKVSDDFYH 79



 Score = 28.3 bits (60), Expect = 9.0
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = -2

Query: 338 YHHIRPDYHHIRLDCHHIRLDCHHIRLDYHHIRPDCHH 225
           ++H+  D   +  D +H+  D H +  D   +  D +H
Sbjct: 28  FYHVSRDTRKVSYDFNHVSRDTHEVSCDTCRVSDDFYH 65


>03_05_0220 +
           22063411-22063468,22063535-22063545,22064478-22064609,
           22064696-22065799,22065874-22066566,22066968-22067019,
           22067861-22067916,22067917-22068063
          Length = 750

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 9/50 (18%), Positives = 24/50 (48%)
 Frame = -2

Query: 377 HHIRLGCHQIRLGYHHIRPDYHHIRLDCHHIRLDCHHIRLDYHHIRPDCH 228
           +H+     ++    + +  D++H+  D   I  D + +  D++H+  D +
Sbjct: 687 YHVSGDTREVSCDTYQVSDDFYHVSGDTREISCDTYQVLDDFYHVSGDTY 736


>03_03_0078 + 14287889-14288098,14289404-14289649
          Length = 151

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 73  SASVLKMKITIACLILIVTACYGYPYGYGHES 168
           +A  +K+ + + C +L+  AC G   GY  +S
Sbjct: 2   AAHTIKLAVAVTCTLLLAAACSGLEVGYYKKS 33


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,953,737
Number of Sequences: 37544
Number of extensions: 182527
Number of successful extensions: 380
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)