Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_N18
(917 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.55
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.55
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.55
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.55
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.55
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 26 0.55
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.55
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 26 0.55
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 24 2.2
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 3.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 3.9
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 23 3.9
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 22 6.8
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 22 6.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 6.8
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 22 9.0
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 9.0
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 9.0
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 22 9.0
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 22 9.0
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.55
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -3
Query: 186 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLTGQNLKD 31
R R PS I LF++ L K+I IL GN R G L++
Sbjct: 284 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQE 335
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.55
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -3
Query: 186 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLTGQNLKD 31
R R PS I LF++ L K+I IL GN R G L++
Sbjct: 284 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQE 335
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.55
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -3
Query: 186 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLTGQNLKD 31
R R PS I LF++ L K+I IL GN R G L++
Sbjct: 284 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQE 335
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.55
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -3
Query: 186 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLTGQNLKD 31
R R PS I LF++ L K+I IL GN R G L++
Sbjct: 284 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQE 335
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.55
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -3
Query: 186 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLTGQNLKD 31
R R PS I LF++ L K+I IL GN R G L++
Sbjct: 284 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQE 335
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.55
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -3
Query: 186 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLTGQNLKD 31
R R PS I LF++ L K+I IL GN R G L++
Sbjct: 284 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQE 335
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.8 bits (54), Expect = 0.55
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -3
Query: 186 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLTGQNLKD 31
R R PS I LF++ L K+I IL GN R G L++
Sbjct: 352 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQE 403
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.8 bits (54), Expect = 0.55
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -3
Query: 186 RKSSRIA*PSVINWLFIESCMMLANKFTKTKRI*IPPILSGNTRLTGQNLKD 31
R R PS I LF++ L K+I IL GN R G L++
Sbjct: 352 RTPDRYVMPSWIKMLFLQWLPCLLRMSRPGKKITKKTILGGNRRAKGMELQE 403
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 23.8 bits (49), Expect = 2.2
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +3
Query: 753 LQRVIHNLTYXIPVSKDXYY 812
L V HNL Y P S++ YY
Sbjct: 257 LSPVTHNLYYNSPSSENLYY 276
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 3.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 527 IFKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 634
++KN I E + Y P P+G WI+++E
Sbjct: 116 LYKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 151
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.0 bits (47), Expect = 3.9
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 527 IFKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 634
++KN I E + Y P P+G WI+++E
Sbjct: 116 LYKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 151
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 23.0 bits (47), Expect = 3.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 141 FIESCMMLANKFTKTKRI*IPPILSGN 61
F E CM L K +T+ +P ILS N
Sbjct: 212 FTELCMKLGWKSARTRFDILPLILSAN 238
Score = 22.2 bits (45), Expect = 6.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 512 PQPAR*SQALCKCSSRVHYTCNI 444
PQP +AL KC +R TCN+
Sbjct: 701 PQPI--GKALSKCHNRNVTTCNM 721
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.2 bits (45), Expect = 6.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 530 FKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 634
+KN I E + Y P P+G WI+++E
Sbjct: 117 YKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 151
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 22.2 bits (45), Expect = 6.8
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 530 FKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 634
+KN I E + Y P P+G WI+++E
Sbjct: 342 YKNYIINIEQIPVPVPVYYGNFPPRPMGPWISMQE 376
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.2 bits (45), Expect = 6.8
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -2
Query: 535 LKNIHALHHSRLDKAKLFAN 476
LKN AL+H + DK L N
Sbjct: 436 LKNDEALNHDQPDKYDLIGN 455
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.8 bits (44), Expect = 9.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 320 NDKIRCFFEEGAIDADGN 373
N+ +C +EG A+GN
Sbjct: 45 NNYFKCLMDEGRCTAEGN 62
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.8 bits (44), Expect = 9.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 530 FKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 634
+KN I E + Y P P+G WI+++E
Sbjct: 106 YKNYIINIEQIPVPVPIYCGNFPPRPMGPWISIQE 140
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 9.0
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +2
Query: 530 FKNPGIGSEVVAHQDATYLYTEPTPPVGFWIALEE 634
+KN I E + Y P P+G WI+++E
Sbjct: 347 YKNYIINIEQIPVPVPIYCGNFPPRPMGPWISIQE 381
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.8 bits (44), Expect = 9.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 320 NDKIRCFFEEGAIDADGN 373
N+ +C +EG A+GN
Sbjct: 45 NNYFKCLMDEGRCTAEGN 62
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.8 bits (44), Expect = 9.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +2
Query: 320 NDKIRCFFEEGAIDADGN 373
N+ +C +EG A+GN
Sbjct: 45 NNYFKCLMDEGRCTAEGN 62
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,153
Number of Sequences: 438
Number of extensions: 5455
Number of successful extensions: 32
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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