Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_N14
         (907 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662...    42   7e-04
05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,753...    40   0.003
10_01_0028 - 359988-359996,360228-360332,360415-360536,360676-36...    39   0.005
10_05_0046 + 8516043-8516425,8517908-8518019,8518276-8518377,851...    29   6.7  
09_06_0056 - 20561645-20561920,20562024-20562611,20562698-205630...    28   8.9  

>03_02_0234 +
           6625417-6626184,6626314-6626339,6626435-6626531,
           6627009-6627116,6627194-6627328,6627429-6627528,
           6627763-6627974,6628060-6628125,6628231-6628464,
           6628583-6628641,6628716-6628782,6628863-6629192,
           6629267-6629335,6629417-6629503,6629605-6629692,
           6630057-6630178,6630251-6630355,6630442-6630485,
           6630558-6630627,6630711-6630814,6630980-6631189,
           6632935-6633018,6633291-6634003,6634115-6634649,
           6634703-6634789,6634826-6634970,6635049-6635125,
           6635215-6635359,6635462-6635626,6635725-6635958
          Length = 1761

 Score = 41.9 bits (94), Expect = 7e-04
 Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = +1

Query: 379 KGKLHYLIRWKGYSADSDTWEPEQTLS-CPELIGKF 483
           K  L + +RWKGY    DTWEP   LS CPE I +F
Sbjct: 576 KNGLWFKVRWKGYDPSYDTWEPIDGLSDCPERIKEF 611


>05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,
            7535889-7535932,7536042-7536146,7536223-7536344,
            7536807-7536894,7536966-7537052,7537718-7537786,
            7537859-7538188,7539777-7539824,7540003-7540069,
            7540150-7540208,7541220-7541453,7541536-7541601,
            7541684-7541883,7542104-7542197,7542295-7542414,
            7542596-7542703,7542808-7542871,7543378-7543409,
            7546049-7548007
          Length = 1407

 Score = 39.9 bits (89), Expect = 0.003
 Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = +1

Query: 367  SKKIKGKLHYLIRWKGYSADSDTWEPEQTL-SCPELIGKF 483
            +K  K  L++ +RWKGY    DTWEP + L +C E I  F
Sbjct: 949  NKVSKHGLYFKVRWKGYGPHHDTWEPVEGLRNCKEAIRDF 988


>10_01_0028 -
           359988-359996,360228-360332,360415-360536,360676-360763,
           360988-361056,361132-361461,361544-361610,361695-361753,
           361838-362056,362224-362289,362370-362500,362683-362782,
           362864-363001,363111-363218,363627-363723,363806-364257
          Length = 719

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = +1

Query: 388 LHYLIRWKGYSADSDTWEPEQTL-SCPELIGKF 483
           L++ ++WKGY  + DTWEP + L  CP  I +F
Sbjct: 434 LYFKVQWKGYGREEDTWEPIENLRDCPLKIKEF 466


>10_05_0046 +
           8516043-8516425,8517908-8518019,8518276-8518377,
           8518605-8518657,8518976-8519062,8519162-8519830,
           8520154-8520214,8520295-8520342
          Length = 504

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +1

Query: 379 KGKLHYLIRWKGYSADSDTWEPEQTLSCPELIGK 480
           KGKL YL++W G   +   W+    L+ PEL G+
Sbjct: 119 KGKLQYLVKW-GSQWEGGAWD----LAAPELSGR 147


>09_06_0056 -
           20561645-20561920,20562024-20562611,20562698-20563055,
           20563149-20563483,20563593-20563633,20563722-20563932,
           20564289-20564348,20564432-20564457,20565066-20565264
          Length = 697

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
 Frame = +1

Query: 82  LLIKFIMRKISKN-RTDDDVVSSTNGSLLNDDQTATENKTVE---SVTDES 222
           L + F  ++ S + +TDD V   +N SL  DD+  +EN + E   S+TD++
Sbjct: 110 LSVDFFRKRASPSWKTDDLVNDLSNASLDVDDKVKSENSSAEHELSLTDKT 160


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,887,019
Number of Sequences: 37544
Number of extensions: 271211
Number of successful extensions: 702
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)