Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_N09
         (892 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.8  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    23   4.9  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   6.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   6.5  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   6.5  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   6.5  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   6.5  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 12/48 (25%), Positives = 20/48 (41%)
 Frame = -2

Query: 723 SATRELPGGTPGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPF 580
           S  + +  GTP  F + +    +   +D   +R+G      TPA   F
Sbjct: 620 STEKRVSAGTPAAFNISTTIYENQNCLDASSSRRGSKIGSPTPAESTF 667


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 708 APSLRSPVPTLPLTG 752
           AP    P+P+LPL G
Sbjct: 468 APCFEEPLPSLPLPG 482


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 695 VPPGSSLVALSCSDPAAYRIPVRL 766
           VP    + + S  DPA YRI  R+
Sbjct: 402 VPSALEIFSTSMKDPAFYRIYKRI 425


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 695 VPPGSSLVALSCSDPAAYRIPVRL 766
           VP    + + S  DPA YRI  R+
Sbjct: 402 VPSALEIFSTSMKDPAFYRIYKRI 425


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
 Frame = +1

Query: 541 TCEQKASKRPGTVKRPR--CWRFSIGSAPLTSITKIDAQVRXGETRQDYKDTR 693
           T      +R   V +PR   WR +I S           ++  G + +D+K TR
Sbjct: 382 TAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTR 434


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
 Frame = +1

Query: 541 TCEQKASKRPGTVKRPR--CWRFSIGSAPLTSITKIDAQVRXGETRQDYKDTR 693
           T      +R   V +PR   WR +I S           ++  G + +D+K TR
Sbjct: 297 TAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTR 349


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
 Frame = +1

Query: 541 TCEQKASKRPGTVKRPR--CWRFSIGSAPLTSITKIDAQVRXGETRQDYKDTR 693
           T      +R   V +PR   WR +I S           ++  G + +D+K TR
Sbjct: 616 TAPNAEERRVQGVTKPRYMVWRETISSTATLGFRVEGIKLAHGGSSKDFKTTR 668


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,970
Number of Sequences: 438
Number of extensions: 4928
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)