Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_N04
(923 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0508 + 3710435-3710980,3711086-3711238,3711323-3711408,371... 44 2e-04
05_03_0110 + 8500204-8500460,8502544-8502612,8502725-8502790,850... 42 0.001
08_02_0305 + 15586044-15586073,15586846-15586968,15587060-155872... 37 0.020
05_01_0502 + 4191443-4191769,4191770-4191892,4194161-4194313,419... 37 0.020
09_02_0312 - 7168332-7168408,7168492-7168621,7168793-7168861,716... 36 0.045
04_04_1697 - 35454337-35454576,35454657-35454888,35455045-354552... 31 1.7
05_04_0293 - 19898254-19898819,19899698-19899701 30 3.0
05_01_0165 - 1139271-1139417,1139549-1139777,1139889-1139992,114... 29 3.9
08_01_0035 - 262750-262962,263046-263277,263420-263627,263762-26... 29 5.2
03_02_0611 + 9842550-9843035,9844313-9844416,9844586-9844814,984... 29 5.2
08_02_1420 + 26942777-26942905,26944415-26944511,26944596-269449... 29 6.9
01_01_0977 - 7717808-7717837,7718227-7718327,7718449-7718548,771... 29 6.9
11_06_0223 - 21419128-21419397,21419493-21419747,21420243-214204... 28 9.1
>01_01_0508 +
3710435-3710980,3711086-3711238,3711323-3711408,
3711533-3711617,3711705-3711824,3711906-3711974,
3712088-3712217,3712336-3712406
Length = 419
Score = 43.6 bits (98), Expect = 2e-04
Identities = 25/77 (32%), Positives = 37/77 (48%)
Frame = +2
Query: 515 PWAIAKLLTTLCSXVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSRXXXXXXXXXX 694
P A +L T+ + +S+ KV VS+ HT+KA+ P +T L+ GE S
Sbjct: 188 PLAAGHMLGTVFTNMSLSKVAVSFTHTIKASEPFFTVLLSAFFLGETPSLLVLGSLVPIV 247
Query: 695 XXXXXXSXTELQFDALG 745
S TEL F+ +G
Sbjct: 248 GGVALASLTELSFNWIG 264
>05_03_0110 +
8500204-8500460,8502544-8502612,8502725-8502790,
8502885-8502963,8504270-8504390,8504486-8504581,
8505403-8505515,8505612-8505689,8507777-8507893,
8508194-8508293,8508463-8508563,8509093-8509110
Length = 404
Score = 41.5 bits (93), Expect = 0.001
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +2
Query: 512 YPWAIAKLLTTLCSXVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSRXXXXXXXXX 691
+P A+ + + S VS V VS+AHT+KA P + A ++ + G++V
Sbjct: 168 FPVAVCHAIGHVTSTVSFAAVAVSFAHTIKALEPFFNAAASQFILGQQVPLTLWLSLAPV 227
Query: 692 XXXXXXXSXTELQFDALGAGN 754
S TEL F+ G N
Sbjct: 228 VIGVSMASLTELSFNWTGFVN 248
Score = 28.3 bits (60), Expect = 9.1
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +1
Query: 292 RRETLIVGFLCAAWYMLSSASNVVGKLALTELPFP 396
R L+ GF WY L+ N++ K P+P
Sbjct: 96 RYPALVTGFFFFMWYFLNVIFNILNKKIFDYFPYP 130
>08_02_0305 +
15586044-15586073,15586846-15586968,15587060-15587212,
15587313-15587398,15588327-15588411,15588796-15588864,
15589261-15589326
Length = 203
Score = 37.1 bits (82), Expect = 0.020
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 515 PWAIAKLLTTLCSXVSIWKVPVSYAHTVKATTPLWTAGLARVLFGE 652
P A+ + L + +S+ KV VS+ HT+KA P ++ L+ + GE
Sbjct: 57 PLAVVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSAIFLGE 102
>05_01_0502 +
4191443-4191769,4191770-4191892,4194161-4194313,
4194420-4194505,4194648-4194732,4194871-4194990,
4195066-4195134,4195351-4195506
Length = 372
Score = 37.1 bits (82), Expect = 0.020
Identities = 21/77 (27%), Positives = 36/77 (46%)
Frame = +2
Query: 515 PWAIAKLLTTLCSXVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSRXXXXXXXXXX 694
P A+ + + + +S+ KV VS+ HT+KA P ++ L+ + GE S
Sbjct: 156 PLALVHTMGNVFTNMSLGKVAVSFTHTIKAMEPFFSVLLSVLFLGETPSFLVLGSLVPIV 215
Query: 695 XXXXXXSXTELQFDALG 745
S TE+ F+ +G
Sbjct: 216 GGVVLASMTEVSFNWIG 232
>09_02_0312 -
7168332-7168408,7168492-7168621,7168793-7168861,
7168947-7169066,7169356-7169440,7169565-7169650,
7169762-7169914,7170008-7170130,7170974-7171357
Length = 408
Score = 35.9 bits (79), Expect = 0.045
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +2
Query: 515 PWAIAKLLTTLCSXVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSRXXXXXXXXXX 694
P A+ + L + +S+ KV VS+ HT+KA P ++ L+ + GE +
Sbjct: 175 PLAMVHTMGNLFTNMSLGKVAVSFTHTIKAMEPFFSVLLSALFLGEMPTPFVVLSLVPIV 234
Query: 695 XXXXXXSXTELQFDALG 745
S TE F+ G
Sbjct: 235 GGVALASLTEASFNWAG 251
Score = 34.3 bits (75), Expect = 0.14
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 286 GSRRETLIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAVQ 417
G +TL +G L WY+ + N+ K L P+P+ +T VQ
Sbjct: 100 GGLAKTLQLGALFGLWYLFNIYFNIYNKQVLKVFPYPINITNVQ 143
>04_04_1697 -
35454337-35454576,35454657-35454888,35455045-35455252,
35455380-35455629,35456232-35456354
Length = 350
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/78 (23%), Positives = 32/78 (41%)
Frame = +2
Query: 512 YPWAIAKLLTTLCSXVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSRXXXXXXXXX 691
+P + + + VS+ +PVS+ T+K+ TP T L +++ +
Sbjct: 88 FPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLVWSKHFEWRIWASLVPI 147
Query: 692 XXXXXXXSXTELQFDALG 745
S TEL F+ G
Sbjct: 148 VGGILLTSITELSFNMFG 165
>05_04_0293 - 19898254-19898819,19899698-19899701
Length = 189
Score = 29.9 bits (64), Expect = 3.0
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +1
Query: 742 GGWEPXLTSXALLALQ-HLYSKRALQDSRRAPLA 840
GGW+P L L + H Y ++A + +RR PLA
Sbjct: 78 GGWDPPLACAILQECELHSYLRQARRPARRRPLA 111
>05_01_0165 -
1139271-1139417,1139549-1139777,1139889-1139992,
1140097-1140639
Length = 340
Score = 29.5 bits (63), Expect = 3.9
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +2
Query: 539 TTLCSXVSIWKVPVSYAHTVKATTPLWTAGLARVLFGER 655
+ + VS+ +PVS+ V ATTP +TA LA + R
Sbjct: 122 SVVAGNVSLRYLPVSFNQAVGATTPFFTAVLAYAVAARR 160
>08_01_0035 -
262750-262962,263046-263277,263420-263627,263762-264011,
265232-265342
Length = 337
Score = 29.1 bits (62), Expect = 5.2
Identities = 18/78 (23%), Positives = 32/78 (41%)
Frame = +2
Query: 512 YPWAIAKLLTTLCSXVSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVSRXXXXXXXXX 691
+P + + + VS+ +PVS+ T+K+ TP T L +++ +
Sbjct: 84 FPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLVWRKYFEWRIWASLVPI 143
Query: 692 XXXXXXXSXTELQFDALG 745
S TEL F+ G
Sbjct: 144 VGGIMLTSITELSFNMFG 161
>03_02_0611 +
9842550-9843035,9844313-9844416,9844586-9844814,
9846121-9846270
Length = 322
Score = 29.1 bits (62), Expect = 5.2
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 557 VSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVS 661
VS+ +PVS+ V ATTP +TA A ++ +R S
Sbjct: 109 VSLRYLPVSFNQAVGATTPFFTAVFAYIMTVKRES 143
>08_02_1420 +
26942777-26942905,26944415-26944511,26944596-26944962,
26945286-26945793
Length = 366
Score = 28.7 bits (61), Expect = 6.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 529 QTSYHTVLXSFHLESASLLCPH 594
QTSYHTV + S+SL+CP+
Sbjct: 73 QTSYHTVGDHSNAASSSLVCPY 94
>01_01_0977 -
7717808-7717837,7718227-7718327,7718449-7718548,
7718706-7718822,7718913-7718990,7719980-7720058,
7720184-7720249,7720373-7720441,7720890-7721188
Length = 312
Score = 28.7 bits (61), Expect = 6.9
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +1
Query: 304 LIVGFLCAAWYMLSSASNVVGKLALTELPFPLTMTAV 414
LI GF WY L+ N++ K P+P ++ +
Sbjct: 114 LITGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVI 150
>11_06_0223 -
21419128-21419397,21419493-21419747,21420243-21420414,
21420530-21420757,21420916-21421049,21421309-21421392,
21421554-21421760,21421871-21422203,21422343-21422449,
21422823-21422988,21423127-21423230,21423347-21423507,
21423595-21424495,21424642-21424732,21424837-21425127,
21425491-21425575,21425665-21425747,21427653-21427773,
21427785-21428260
Length = 1422
Score = 28.3 bits (60), Expect = 9.1
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 557 VSIWKVPVSYAHTVKATTPLWTAGLARVLFGERVS 661
++I K+PV Y H P WT G+A +L VS
Sbjct: 626 LTIKKLPVFYKHRDFLFFPAWTFGVANILLKVPVS 660
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,016,831
Number of Sequences: 37544
Number of extensions: 434288
Number of successful extensions: 1189
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2635816500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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