Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_M24
(958 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 39 0.001
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.002
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.034
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.079
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 31 0.32
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.32
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 30 0.42
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 9.0
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 39.1 bits (87), Expect = 0.001
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Frame = +1
Query: 763 PTXXPXPRPPXXPX-PXGGPPXCXXXXHXXXXXPXPXXPXXPXPAPXXXPPXXPXXPPPP 939
PT P PRP P P PP P P P P +P P PP P
Sbjct: 140 PTSAP-PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 940 PXAPXP 957
P P P
Sbjct: 199 PKVPPP 204
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 605 AXPPXXPXXTHPXXXXPXPXXHPPXPXPPXPXGAXSP 715
A PP P P P PP P P P A +P
Sbjct: 122 AAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAP 158
Score = 26.6 bits (56), Expect = 5.2
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +1
Query: 325 PPMQXXXXPPLXAXPXXLXPPPPPHXXXQVXGGGXGGXSXXXXPAPPRGEAPXVRGPXPL 504
P Q PP A P PPP P + S PA P A V+ P
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP---AAPVKSPPSA 187
Query: 505 P 507
P
Sbjct: 188 P 188
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 859 PXPXXPXXPXPAPXXXPPXXPXXPPPPPXAPXP 957
P P P P PP P PPP P + P
Sbjct: 128 PAPPTPQSELRPPTSAPPR-PSIPPPSPASAPP 159
Score = 25.8 bits (54), Expect = 9.0
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +1
Query: 754 PGKPTXXPXPRPPXXPXPXGGPPXCXXXXHXXXXXPXPXXPXXPXPAPXXXPPXXPXXPP 933
P P P P P PP P P P P PP P PP
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPA------QPAAPVKSPPSAP-SLPSAVPPMPPKVPP 203
Query: 934 PP 939
PP
Sbjct: 204 PP 205
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.3 bits (85), Expect = 0.002
Identities = 45/200 (22%), Positives = 47/200 (23%), Gaps = 5/200 (2%)
Frame = +1
Query: 325 PPMQXXXXPPLXAXPXXLXPPPPPHXXXQ---VXGGGXGGXSXXXXPAPPRGEAPXVRGP 495
PP L A PPPPP + G G S P PPR A G
Sbjct: 294 PPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNA---AGS 350
Query: 496 XPLPXSXTXRXGGRXXXXXXXXXXXXXXXRGXPXXPXPXPXXTPXXPPXXT--XAXPXXP 669
PLP GR R P P PP + P P
Sbjct: 351 IPLPPQ------GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP 404
Query: 670 PPXXRXXXXXXXXXXXXXXXXXXXXXXEPGKPTXXPXPRPPXXPXPXGGPPXCXXXXHXX 849
P P P P P P P P
Sbjct: 405 PLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464
Query: 850 XXXPXPXXPXXPXPAPXXXP 909
P P P PAP P
Sbjct: 465 AAPPLPPAAPAPPPAPAPAP 484
Score = 31.1 bits (67), Expect = 0.24
Identities = 18/61 (29%), Positives = 19/61 (31%)
Frame = +1
Query: 775 PXPRPPXXPXPXGGPPXCXXXXHXXXXXPXPXXPXXPXPAPXXXPPXXPXXPPPPPXAPX 954
P P PP G PP + P P P PP PPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP-PRSNAAGSIPLPPQGRSAPPPPPPRSA 369
Query: 955 P 957
P
Sbjct: 370 P 370
Score = 30.7 bits (66), Expect = 0.32
Identities = 26/99 (26%), Positives = 29/99 (29%), Gaps = 3/99 (3%)
Frame = +2
Query: 611 PPXXPXXTHPXXXXPXPXXHPPXPXPPXPXGAXSPLR-XXPXXSXXXXXXXXXXXXXXPG 787
PP P ++ P P P PP P A S R P S PG
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPG 397
Query: 788 PPXXXXPXGGPRXASSXXTXXXXP--PXXAXPXXPPRPP 898
P G +S P P A P PP P
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAP 436
Score = 30.7 bits (66), Expect = 0.32
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = +3
Query: 324 PPXAXGXXAPPXXXTXXXXPPPPPPXXVPGXGRR 425
PP + + P PPPPPP P GR+
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQ 375
Score = 29.1 bits (62), Expect = 0.97
Identities = 20/83 (24%), Positives = 21/83 (25%)
Frame = +3
Query: 633 PTRPHXGPPXXPTPXXPXRRXPXGLXPPSGXXPXXHPPXRTXETNRVPXXPAPRXPXTXR 812
P P P P R PP P + V PAP R
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 813 GAPEXXXXXAXXXXXPPPXPXPP 881
AP PP P PP
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPP 421
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/60 (30%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Frame = +3
Query: 654 PPXXPTPXXPXR-RXPXGLXPPSGXXPXXHPPXRTXETNRVPXXPAPR---XPXTXRGAP 821
PP P P R + P G + P PP R+ +P P R P R AP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 27.5 bits (58), Expect = 3.0
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 6/62 (9%)
Frame = +1
Query: 790 PXXPXP----XGGPPXCXXXXHXXXXXPXPXXPXXPXPAP--XXXPPXXPXXPPPPPXAP 951
P P P PP P P P AP P P PP PP AP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 952 XP 957
P
Sbjct: 475 AP 476
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.9 bits (74), Expect = 0.034
Identities = 30/122 (24%), Positives = 33/122 (27%), Gaps = 8/122 (6%)
Frame = +1
Query: 601 PXPXPXXTPXXPPXXTXAXPXXPPPXXRXXXXXXXXXXXXXXXXXXXXXXEPGKP----T 768
P P P TP P + A P PPP P P
Sbjct: 1042 PVPIPTSTPPVPKSSSGA-PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVA 1100
Query: 769 XXPXPRP----PXXPXPXGGPPXCXXXXHXXXXXPXPXXPXXPXPAPXXXPPXXPXXPPP 936
P P+P P P P G PP P P P+ P P PP
Sbjct: 1101 APPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Query: 937 PP 942
P
Sbjct: 1161 VP 1162
Score = 31.9 bits (69), Expect = 0.14
Identities = 45/221 (20%), Positives = 50/221 (22%), Gaps = 13/221 (5%)
Frame = +1
Query: 328 PMQXXXXPPLXAXPXXLXPPPPPHXXXQVXGGGXGGXSXXXXPAPPRGEAPXVRGPXPLP 507
P+ PP+ P P P P V G S P E P + P P
Sbjct: 1025 PLPSADAPPIPV-PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP 1083
Query: 508 XSXTXRXGGRXXXXXXXXXXXXXXXRGXPXXPXPXPXXTPXXPPXXTXAXPXX-----PP 672
G P P P P P A P PP
Sbjct: 1084 P--VPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Query: 673 PXXRXXXXXXXXXXXXXXXXXXXXXXEPGKPTXX----PXPRP----PXXPXPXGGPPXC 828
P P P P+P P P P PP
Sbjct: 1142 VPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Query: 829 XXXXHXXXXXPXPXXPXXPXPAPXXXPPXXPXXPPPPPXAP 951
P P P P+ P P PP AP
Sbjct: 1202 KPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 30.7 bits (66), Expect = 0.32
Identities = 28/128 (21%), Positives = 29/128 (22%), Gaps = 9/128 (7%)
Frame = +1
Query: 601 PXPXPXXTPXXPPXXTXAXPXXPPPXXRXXXXXXXXXXXXXXXXXXXXXXEPGKPTXXPX 780
P P P P + A P P P P
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV 1152
Query: 781 PRP---PXXPXPXGGPPXCXXXXHXXXXXPXPXXPXXPXPAPXXXPP------XXPXXPP 933
P P P P P P P P P P P PP P PP
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 934 PPPXAPXP 957
P P P
Sbjct: 1213 PSTAPPVP 1220
Score = 26.2 bits (55), Expect = 6.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 324 PPXAXGXXAPPXXXTXXXXPPPPPPXXVP 410
PP APP PP PPP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +2
Query: 602 PAXPPXXPXXTHPXXXXPXPXXHPPXPXP 688
P+ PP P + P P PP P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAP 1088
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.7 bits (71), Expect = 0.079
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 865 PXXPXXPXPAPXXXPPXXPXXPPPP 939
P P P P P PP P PPPP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 323 PPXCXGXLXPPXXRHXPXXPPPPPP 397
PP PP P PPPPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 9.0
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +3
Query: 654 PPXXPTPXXPXRRXPXGLXPPSGXXPXXHPPXRTXETNRVP 776
PP P P P P G PPS P P N+ P
Sbjct: 5 PPGNPPPPPP----PPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 25.8 bits (54), Expect = 9.0
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 907 PPXXPXXPPPPPXAPXP 957
PP P PPPPP P
Sbjct: 5 PPGNPPPPPPPPGFEPP 21
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 30.7 bits (66), Expect = 0.32
Identities = 18/70 (25%), Positives = 19/70 (27%), Gaps = 2/70 (2%)
Frame = +1
Query: 754 PGKPTXXPXPRPPXXPXPXGGP--PXCXXXXHXXXXXPXPXXPXXPXPAPXXXPPXXPXX 927
P +P P P P P P P P P P P P P
Sbjct: 620 PQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSV 679
Query: 928 PPPPPXAPXP 957
P PP P
Sbjct: 680 PQPPAVPVVP 689
Score = 27.1 bits (57), Expect = 3.9
Identities = 19/70 (27%), Positives = 20/70 (28%), Gaps = 4/70 (5%)
Frame = +1
Query: 754 PGKPTXXPXPRPPXXPXPXGGP--PXCXXXXHXXXXXPXPXXPXXPXPAPXXXPPXXPXX 927
P +P P P P P P P P P P P P
Sbjct: 545 PQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSV 604
Query: 928 PPPP--PXAP 951
P PP P AP
Sbjct: 605 PQPPVAPVAP 614
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.32
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 883 PXPAPXXXPPXXPXXPPPPPXAPXP 957
P PAP PP P PPP P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 29.5 bits (63), Expect = 0.73
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 865 PXXPXXPXPAPXXXPPXXPXXPPPPPXAPXP 957
P P P P PP PPPP P P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.97
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +1
Query: 775 PXPRPPXXPXPXGGPPXCXXXXHXXXXXPXPXXPXXPXPAPXXXPPXXPXXPPPPP 942
P P PP P P P P P P P P PPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPP----PAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 6/39 (15%)
Frame = +1
Query: 859 PXPXXPXXPXPAPXXXPPXXPXXPP------PPPXAPXP 957
P P P PAP P P PP PPP P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 351 PPXXXTXXXXPPPPPPXXVPGXG 419
PP PPPPPP V G G
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAG 774
Score = 27.1 bits (57), Expect = 3.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 351 PPXXXTXXXXPPPPPPXXVPGXGRR 425
PP PPPPPP V G R
Sbjct: 767 PPGVAGAGPPPPPPPPPAVSAGGSR 791
Score = 26.6 bits (56), Expect = 5.2
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 601 PXPXPXXTPXXPPXXTXAXPXXPPP 675
P P P P PP P PPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPP 766
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 30.3 bits (65), Expect = 0.42
Identities = 26/75 (34%), Positives = 27/75 (36%), Gaps = 6/75 (8%)
Frame = -2
Query: 819 GPPXGXXXXGGPGXXXX-----GWFPXFGGG-GXXXGXXRRGXXAPXGXGGXGXGGWXXG 658
GPP G GG G G FGGG G G P G GG G GG+ G
Sbjct: 199 GPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGG-GLGGFGGG 257
Query: 657 XGXXXXGWVXXGXXG 613
G G G G
Sbjct: 258 PGGFGGGPGGHGGPG 272
Score = 28.7 bits (61), Expect = 1.3
Identities = 19/50 (38%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
Frame = -3
Query: 950 GAXGGG-GGXXGXXGGXXXGAGXGXXGXXGXGXXXXXCXXXXXLGGPPXG 804
G GGG GG G GG G G G G G G GG P G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPG-GFGGFGGFGGEGHHHGGHGGFGGGPGG 232
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.3
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 859 PXPXXPXXPXPAPXXXPPXXPXXPPPPPXAPXP 957
P P P P P PP P PP P P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPP-MPAGPPSAPPPPLP 1736
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Frame = +1
Query: 859 PXPXXPXXPXPAPXXXPPXXPXXPPPP-PXAPXP 957
P P P P+ P P PPPP P + P
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.2 bits (55), Expect = 6.8
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +1
Query: 841 HXXXXXPXPXXPXXPXPAPXXXPPXXPXXPPPPPXAP 951
H P P PP P PPPP AP
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 25.8 bits (54), Expect = 9.0
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = +2
Query: 602 PAXPPXXPXXTHPXXXXPXPXXHPPXPXPPXP 697
P PP P P P P P PP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2
Query: 821 RXASSXXTXXXXPPXXAXPXXPPRPP 898
R ++ + PP A P PPRPP
Sbjct: 261 RNVNNLGSQVNIPPPPATPSQPPRPP 286
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,947,379
Number of Sequences: 5004
Number of extensions: 29893
Number of successful extensions: 403
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 489310570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -