Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_M23
(923 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC890.04c |||ribosome biogenesis protein Ytm1 |Schizosaccharom... 106 5e-24
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 38 0.002
SPAC630.14c |tup12||transcriptional corepressor Tup12 |Schizosac... 36 0.008
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 36 0.011
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 35 0.019
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 34 0.025
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 34 0.033
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 33 0.057
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 33 0.057
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 33 0.075
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 32 0.099
SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein Mfr1|Schizosa... 32 0.13
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 32 0.13
SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit Git... 32 0.13
SPAC806.02c |||Par A family ATPase iron cluster assembly protein... 31 0.17
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 31 0.17
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 31 0.17
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 31 0.17
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 31 0.30
SPAC25H1.08c |||ribosome biogenesis protein Sqt1|Schizosaccharom... 31 0.30
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 30 0.40
SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13... 30 0.40
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 30 0.53
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 30 0.53
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 29 0.70
SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces ... 29 0.70
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 29 0.93
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 29 1.2
SPAC13G6.08 |||Cdc20/Fizzy family WD repeat protein|Schizosaccha... 29 1.2
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 28 1.6
SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4 family|S... 28 1.6
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 28 1.6
SPAC343.17c |||WD repeat protein, human WDR70 family|Schizosacch... 28 2.1
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 27 2.8
SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyc... 27 2.8
SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyc... 27 2.8
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 27 2.8
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 27 2.8
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 27 3.7
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 27 3.7
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 27 4.9
SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation co... 27 4.9
SPBC32F12.02 |rec14||recombination protein Rec14|Schizosaccharom... 27 4.9
SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyc... 26 6.5
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 26 8.6
SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||... 26 8.6
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 26 8.6
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ... 26 8.6
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 26 8.6
>SPAC890.04c |||ribosome biogenesis protein Ytm1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 440
Score = 106 bits (254), Expect = 5e-24
Identities = 56/151 (37%), Positives = 82/151 (54%)
Frame = +1
Query: 145 ALEAQLQVRFITKQEQYAVPDSPYAIQCNVHPADLNTLINAILKETSPSFEKAVIFDFLV 324
A Q+QVRF T+ E AV D+P + ++ L+ ++N +LK EK FDFLV
Sbjct: 6 APSGQVQVRFTTRNEDLAVGDTPIFVPTSLKRYGLSQIVNHLLKT-----EKPTPFDFLV 60
Query: 325 CGELLCASLAEHLQEKGVSTEDTLEVEYLGRFPAPTPQDCLMHDDWVSAVQAHSSWILSG 504
G+LL +L E++ + G+STE L++EY+ P HDDW+S +Q S IL+
Sbjct: 61 QGQLLKTTLDEYIVQNGLSTESILDIEYIQSTLPPAYLASFSHDDWISGIQLTSDTILTS 120
Query: 505 SYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 597
SYD +W G+ K G S +K+ SW
Sbjct: 121 SYDGIARVWDKSGEIKFQSTGCGSSLKSASW 151
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 38.3 bits (85), Expect = 0.002
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 451 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQG 612
H D V + S+ ++SGS D ++ +W G ++ + GHT PV +V + +G
Sbjct: 352 HTDSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRG 405
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +1
Query: 451 HDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAVSW 597
H D V +Q + + SGSYD ++ +W+ ++A + GH+S V + +
Sbjct: 272 HSDGVMCLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTCLQF 321
Score = 30.7 bits (66), Expect = 0.30
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +1
Query: 334 LLCASLAEHLQEKGVSTEDTLEVEYLGRFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYD 513
++C L ++ G S + T+ + L F + H V+ +Q ++SGS D
Sbjct: 276 VMCLQLVRNILASG-SYDATIRLWNLATFQQVALLEG--HSSGVTCLQFDQCKLISGSMD 332
Query: 514 NSLHIWSTKGQHKLAI-PGHTSPVKAVSWVS 603
++ IW+ + ++I GHT V +++ S
Sbjct: 333 KTIRIWNYRTSECISILHGHTDSVLCLTFDS 363
>SPAC630.14c |tup12||transcriptional corepressor Tup12
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 586
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +1
Query: 451 HDDWVSAVQAH--SSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVS 594
H D++ +V WI+SGS D ++ WS H +L + GH + V +V+
Sbjct: 511 HKDFILSVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVISVA 561
Score = 30.7 bits (66), Expect = 0.30
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 666 VWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSWDNNV 794
+W++ + V ++T GH++ I L S DG SGS D V
Sbjct: 360 IWDIAQKRVYRLLT--GHEQEIYSLDFSKDGKTLVSGSGDRTV 400
Score = 29.1 bits (62), Expect = 0.93
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +1
Query: 436 QDCLMH-DDWVSAVQ--AHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 597
Q ++H DD V+ V +I +GS D + IW++ G + GH V +V++
Sbjct: 410 QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAF 466
Score = 29.1 bits (62), Expect = 0.93
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 696 CMITYRGHDKGIECLSVSADGNRFASGSWDNNVVF 800
C T+ GH I ++VS DG SGS D + F
Sbjct: 504 CKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQF 538
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 714 GHDKGIECLSVSADGNRFASGSWDNNV 794
GH++ + ++ S DG SGS DN +
Sbjct: 456 GHEESVYSVAFSPDGKYLVSGSLDNTI 482
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 35.5 bits (78), Expect = 0.011
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 493 ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSW 597
+ SGS DN++ IW+ K + L + GHT+P+ V W
Sbjct: 242 LASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRW 277
Score = 32.3 bits (70), Expect = 0.099
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 484 SSWILSGSYDNSLHIWSTKGQH-KLAIPGHTSPVKAVSW 597
S ++S S D +L +W + + K +PGH V AV W
Sbjct: 443 SRLLVSSSQDTTLKVWDVRSKKMKFDLPGHEDQVFAVDW 481
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 487 SWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVS 594
+WI S SYD ++ IW K G+ + GH + V +S
Sbjct: 281 NWIYSSSYDKTIRIWDAKDGKCLHILKGHAARVNHLS 317
Score = 29.9 bits (64), Expect = 0.53
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 705 TYRGHDKGIECLSVSADGNRFASGSWDNNVVF 800
T +GH + C++ + D + A+GS DN + F
Sbjct: 172 TMKGHTNWVSCVAWAPDASIIATGSMDNTIRF 203
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 660 LWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSWDNNV 794
L +W+ P+ S + GH K + S S DG A+ S+D++V
Sbjct: 370 LILWD-PQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSV 413
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 34.7 bits (76), Expect = 0.019
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = +1
Query: 451 HDDWVS--AVQAHSSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAV 591
H D+V AV S W LSGS D S+ W + GQ L GH + V +V
Sbjct: 537 HTDFVLSVAVSPDSRWGLSGSKDRSMQFWDLQTGQSYLTCQGHKNSVISV 586
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 702 ITYRGHDKGIECLSVSADGNRFASGSWD 785
+T +GH + + S DG +FASGS D
Sbjct: 574 LTCQGHKNSVISVCFSPDGRQFASGSGD 601
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +1
Query: 469 AVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 597
A+ + +I GS D + +WS G + GH V ++++
Sbjct: 450 AISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAF 492
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 696 CMITYRGHDKGIECLSVSADGNRFASGSWDNNVVF 800
C TY GH + ++VS D SGS D ++ F
Sbjct: 530 CKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQF 564
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 34.3 bits (75), Expect = 0.025
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 660 LWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSWDNNV 794
+++W+V + + T GH+ + LS ++ G+ ASGSWD V
Sbjct: 449 IFMWSVQTGQL--LETLAGHEGPVSSLSFNSSGSLLASGSWDKTV 491
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 33.9 bits (74), Expect = 0.033
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = +1
Query: 466 SAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAV 591
SA +S I++GS+D++ +W+ GQ K + GH S V AV
Sbjct: 103 SASALNSETIITGSWDSTARVWAL-GQCKYVLKGHQSSVWAV 143
Score = 30.3 bits (65), Expect = 0.40
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +1
Query: 445 LMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQ 609
L H+D V ++ S S D + +W++ G+ + GHTS V +++++ Q
Sbjct: 173 LAHNDCVRSLCQIPGGFASCSNDGVIKLWTSDGEFLYELHGHTSFVYSLTYIHNQ 227
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 33.1 bits (72), Expect = 0.057
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 451 HDDWVSAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAV 591
H D V + + ++SGSYD+S+ IW + G+ + GH+ + +V
Sbjct: 506 HTDSVRTISGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSV 553
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 451 HDDWVSAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAV 591
H + V AV+ H + ++SGS D ++ +W+ K + GH S ++ +
Sbjct: 390 HKEGVWAVKIHENTLVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCL 437
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/47 (23%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 451 HDDWVSAVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKA 588
HD +V+ + + ++SGS D+++ IW G+ + +P ++ + +
Sbjct: 588 HDAFVTLLNVFQNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYISS 634
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 33.1 bits (72), Expect = 0.057
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 481 HSSWILSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSW 597
+S ++ +GS D ++++WS G + +PGH V V +
Sbjct: 280 NSRFVGAGSSDKNVYVWSATGDLRYVLPGHEGSVNHVDF 318
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 666 VWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSWDNNV-VFGVQ 809
+W++ N C +GH I L++S DG+ S S DN V +F V+
Sbjct: 203 IWDLRNNH--CSHVLKGHKDIITSLAISKDGSSLLSNSMDNTVRIFDVK 249
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 32.7 bits (71), Expect = 0.075
Identities = 17/55 (30%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Frame = +1
Query: 442 CLM-HDDWVSAVQAH--SSWILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVS 594
CL H ++VS++ + + ++SGS+D ++ IW+ + G +P H+ P+ +VS
Sbjct: 133 CLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTCLRMLPAHSEPIISVS 187
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 666 VWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSWD 785
+WN+ + C+ H + I +S+SADG A+ S+D
Sbjct: 164 IWNLQDGT--CLRMLPAHSEPIISVSISADGTLCATASYD 201
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 705 TYRGHDKGIECLSVSADGNRFASGSWDNNV 794
T GH+K + C+SVS + A+ S D +
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTI 78
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +1
Query: 469 AVQAHSSWILSGSYDNSLHIWST-KGQHKLAIPGHTSPVKAVSWVS 603
+V + WI + S D ++ IWS + + + GH + V W +
Sbjct: 61 SVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWAT 106
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 666 VWNVPRN-SVDCMITYRGHDKGIECLSVSADGNRFASGSWDNNV 794
+W+ + SV C+ +GH + + + G SGSWD V
Sbjct: 122 IWDFEKRCSVRCL---KGHTNYVSSIDFNPLGTLLVSGSWDETV 162
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 32.3 bits (70), Expect = 0.099
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 451 HDDWVSAVQAHSSWILSGSYDNSLHIWSTK 540
H +S++Q S+ + SGSYDNS+ IW +
Sbjct: 535 HTAPISSLQFDSNHLYSGSYDNSVRIWDLR 564
Score = 30.7 bits (66), Expect = 0.30
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 346 SLAEHLQEKGVSTEDTLEVEYLGRFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYDNSLH 525
+LA +K V D V YLG H D+VS + S+I +GS D ++
Sbjct: 346 TLATASTDKTVKVWDMAGVVYLGSLKG--------HSDYVSCLAIQDSFIATGSMDTTVR 397
Query: 526 IWS 534
+W+
Sbjct: 398 LWN 400
>SPBC1198.12 |mfr1|SPBC660.02|fizzy-related protein
Mfr1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 421
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +1
Query: 415 RFPAPTPQDCLMHDDWVSAVQAHSSW--ILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVK 585
R P + +H+ + +Q S + SG DN+L +W + L HT+ VK
Sbjct: 236 RAPGCCAEMMKVHEQEICGLQWDRSLGQLASGGNDNNLFVWDYRSSRPLHKFEEHTAAVK 295
Query: 586 AVSWVSFQ 609
A+ W Q
Sbjct: 296 AIGWSPHQ 303
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +1
Query: 451 HDDWVS--AVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVS 594
H +VS A+ S + LS S+D ++ +W KG+ GHTS V +VS
Sbjct: 62 HSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVS 112
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +3
Query: 666 VWNVPRNSVDCMITYR---GHDKGIECLSVSADGNRFASGSWDNNV 794
+WN+ R+ V+ + R GH + ++S D + S SWD +
Sbjct: 42 LWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTI 87
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +3
Query: 666 VWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSWDNNV 794
+W++ + +C + GH + +S+S D + SGS D +
Sbjct: 89 LWDLEKG--ECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTI 129
>SPBC32H8.07 |git5|gpb1|heterotrimeric G protein beta subunit
Git5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 305
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 714 GHDKGIECLSVSADGNRFASGSWDNNV 794
GH+ I L++++DG A+GSWD V
Sbjct: 272 GHENRISSLALTSDGTMLATGSWDECV 298
>SPAC806.02c |||Par A family ATPase iron cluster assembly
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 608
Score = 31.5 bits (68), Expect = 0.17
Identities = 11/48 (22%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 660 LWVWNVPRNS-VDCMITYRGHDKGIECLSVSADGNRFASGSWDNNVVF 800
+W+W + DC+ + H + ++ ++ + SGS+DN++ F
Sbjct: 402 VWIWEATEDDEFDCLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNSICF 449
Score = 29.9 bits (64), Expect = 0.53
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 693 DCMITYRGHDKGIECLSVSADGNRFASGSWDNNV 794
+C GH+ ++C++ S +GN A+ S D +V
Sbjct: 369 ECTAALEGHENEVKCIAWSCNGNYLATCSRDKSV 402
Score = 29.5 bits (63), Expect = 0.70
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 9/62 (14%)
Frame = +1
Query: 439 DCLM----HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQH---KLAIPGHTSPVKAV 591
DCL H V V H + ++SGSYDNS+ W G + GHT+ V A+
Sbjct: 414 DCLAVLQEHTQDVKVVTWHPTEDLLVSGSYDNSICFWRDDGDDWALTCQLQGHTNTVWAL 473
Query: 592 SW 597
++
Sbjct: 474 AF 475
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 31.5 bits (68), Expect = 0.17
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 6/44 (13%)
Frame = +1
Query: 427 PTPQDCLM---HDDWVSAVQAHSS---WILSGSYDNSLHIWSTK 540
P +DCL H D+V+++ H + LSGS D L +WS K
Sbjct: 337 PVRKDCLCCFEHSDFVTSIAFHPKDDRFFLSGSLDCKLRLWSIK 380
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 31.5 bits (68), Expect = 0.17
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +3
Query: 699 MITYRGHDKGIECLS-VSADGNRFASGSWDNNV 794
+ T++GH KGI CL G+ SGS DN +
Sbjct: 259 IFTWKGHTKGISCLRFFPISGHLLLSGSMDNQI 291
Score = 31.1 bits (67), Expect = 0.23
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 624 HLLVDLMIKXAILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSWDNNV 794
HLL+ + I +W V + + T++GH + I LS S DG F S S+D +
Sbjct: 280 HLLLSGSMDNQIK-IWEVYHDR-SLLRTFQGHARPIRDLSFSQDGRSFLSTSFDKTI 334
Score = 29.1 bits (62), Expect = 0.93
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 493 ILSGSYDNSLHIWSTKGQHKL--AIPGHTSPVKAVSW 597
+LSGS DN + IW L GH P++ +S+
Sbjct: 282 LLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSF 318
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = +1
Query: 451 HDDWVSAVQAH--SSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVS 594
H WV V + W +G+ D ++ IW G KL + GH + V+ ++
Sbjct: 162 HLGWVRCVDVEPGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLA 212
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +1
Query: 469 AVQAHSSWILSGSYDNSLHIWS-TKGQHKLAIPGHTSPVKAVS 594
AVQ +++GS D+++ +W G+ + H V+A+S
Sbjct: 296 AVQEFDPQVVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALS 338
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 699 MITYRGHDKGIECLSVSADGNRFASGSWDN 788
+ T H K + LS+ D FASGS DN
Sbjct: 324 LTTLTHHKKTVRALSLHPDEFTFASGSSDN 353
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 493 ILSGSYDNSLHIWSTKGQ-HKLAIPGHTSPVKAVSWVSFQ 609
+ SG DN + IW + K H + VKAV+W +Q
Sbjct: 319 LASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQ 358
>SPAC25H1.08c |||ribosome biogenesis protein
Sqt1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 399
Score = 30.7 bits (66), Expect = 0.30
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 708 YRGHDKGIECLSVSADGNRFASGSWDNNVV 797
Y GH + I C++++ DG R +GS D ++
Sbjct: 364 YTGHQEPILCMAITPDGKRVVTGSDDTELL 393
Score = 29.1 bits (62), Expect = 0.93
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 663 WVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSWDNNV 794
++W++ C +T GH I + S DG A+G D+ V
Sbjct: 87 YIWDITTGEQICQLT--GHKDSIVAIDWSFDGTYIATGGMDSQV 128
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 30.3 bits (65), Expect = 0.40
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 717 HDKGIECLSVSADGNRFASGSWDNN 791
H KG+ C+S N F SGSWD +
Sbjct: 94 HGKGVSCISKLRLENCFISGSWDKS 118
>SPCC16A11.02 |utp13|SPCC63.16|U3 snoRNP-associated protein Utp13
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 777
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +1
Query: 487 SWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVSFQ 609
S++LSGS D ++ +W+ K + + IP S V+A+ WV+ Q
Sbjct: 202 SFLLSGSRDKTVQVWNIKKRSAVRTIPVFHS-VEAIGWVNGQ 242
Score = 29.1 bits (62), Expect = 0.93
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 460 WVSAVQAHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPVKAVSWVS 603
W + S + SGS D ++ IW+ Q + + GHT + + ++S
Sbjct: 511 WACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIYIS 559
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 705 TYRGHDKGIECLSVSADGNRFASGSWDNNV 794
T + HD+ + + VS DG AS S D +
Sbjct: 460 TIKAHDRDVNAIQVSKDGRIIASASQDKTI 489
Score = 25.8 bits (54), Expect = 8.6
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Frame = +1
Query: 490 WILSGSYDNSLHIWSTKGQHKL-----AIPGHTSPVKAVS 594
W+ +G+ DN++ +W+ + + GHT+ V AV+
Sbjct: 378 WLATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVA 417
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 29.9 bits (64), Expect = 0.53
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 451 HDDWVSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAI-PGHTSPVKAVSW 597
H D+V H WILS S D ++ IW+ + ++ +AI GH+ V ++
Sbjct: 94 HMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSHYVMCAAF 145
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 29.9 bits (64), Expect = 0.53
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 451 HDDWVSAVQAHSSWILSGSYDNSLHIW--STKGQH 549
H+D + V+ + I+SG YD ++ IW +T QH
Sbjct: 428 HEDLIRTVRFNDEKIVSGGYDGTVRIWNFNTGEQH 462
Score = 27.1 bits (57), Expect = 3.7
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 415 RFPAPTPQDCLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHKL-AIPGHTSPV 582
RFPA QD D V VQ ++SGS D ++ +W + L + GH+ V
Sbjct: 210 RFPAD--QDFRATLDSVYCVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSV 264
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 29.5 bits (63), Expect = 0.70
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 693 DCMITYRGHDKGIECLSVSADGNRFASGSWDNNVV 797
+ +IT GH + + G R ASGS D +++
Sbjct: 95 ELLITLNGHKSAVTTMDFDKMGTRLASGSMDTDII 129
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +1
Query: 451 HDDWVSAVQAHSSWILSGSYDNSLHIW 531
H V A+ ++++SGS+D+S+ +W
Sbjct: 659 HHSEVWALAVGPTFVVSGSHDHSIRLW 685
>SPAC26H5.11 |||spore wall assembly protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 965
Score = 29.5 bits (63), Expect = 0.70
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Frame = +1
Query: 484 SSWILSGSYDNSLHIWSTKGQHK--LAIPGHTSPVKAVSWVS 603
+SW + S+DNS+ +W G++K + + S + + W+S
Sbjct: 354 ASWNIYNSFDNSMVLWCPYGKNKTLICLLNFQSSLLSFEWIS 395
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 29.1 bits (62), Expect = 0.93
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 696 CMITYRGHDKGIECLSVSADGNRFASGSWD 785
C + GH + CLSV GN ASG D
Sbjct: 371 CTNVFIGHKGRVRCLSVHVSGNWLASGGDD 400
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 451 HDDWVSAVQAHSSWILSGSYDNSLHIW-STKGQHKLAIPGHTSPVKAVS 594
H D V V I+S SYD +L +W ++ G + GH V +V+
Sbjct: 576 HTDSVREVACLGDLIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVT 624
>SPAC13G6.08 |||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 535
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +3
Query: 657 ILWVWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSWDNNV 794
I+W + + + IT HD+ + L+ + DG++FASG DN V
Sbjct: 302 IIWSESTSKAVLVATIT-NAHDEQVCGLTWNHDGSQFASGGNDNRV 346
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 684 NSVDCMI--TYRGHDKGIECLSVSADGNRFASGSWDNNVV 797
N DC + T GH + I ++S D F + S+D V+
Sbjct: 301 NPSDCKVIDTIYGHQRSITAATLSPDATHFYTASYDGTVL 340
>SPAC227.12 |||U4/U6 x U5 tri-snRNP complex subunit Prp4
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 462
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 714 GHDKGIECLSVSADGNRFASGSWDNNV 794
G ++ I + S +GN FASGSW V
Sbjct: 170 GGERPIAIVRFSNNGNHFASGSWGGQV 196
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 487 SWILSGSYDNSLHIWSTKGQHKLA-IPGHTSPVKAVSWVSF 606
+++LSGS D+ + IW + LA + GH VK V++V++
Sbjct: 441 TFVLSGSEDDKIRIWHRESGKLLATLSGH---VKCVNYVAY 478
>SPAC343.17c |||WD repeat protein, human WDR70
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 576
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 702 ITYRGHDKGIECLSVSADGNRFASGSWDNNV 794
I + GH K + + +G+RF +GS DN +
Sbjct: 83 IMFPGHSKIVTTTTFDKNGSRFYTGSLDNTI 113
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 723 KGIECLSVSADGNRFASGSWDN 788
+GI CLS S DGN S DN
Sbjct: 299 QGISCLSFSQDGNYLLSRGEDN 320
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/31 (32%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +1
Query: 451 HDDWV-SAVQAHSSWILSGSYDNSLHIWSTK 540
H+D+V +A ++ ++SG YD ++ +W T+
Sbjct: 165 HEDYVRTASWMSATRLVSGGYDGTIRLWDTR 195
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 717 HDKGIECLSVSADGNRFASGSWDNNV 794
H K I CL+++++ R SG D +V
Sbjct: 249 HQKSITCLAMNSENTRLLSGGLDGHV 274
>SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 350
Score = 27.5 bits (58), Expect = 2.8
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 740 QAFNSLVVATVSDHTVNRISRYIPY 666
Q+ +++V T + T N +S+Y+PY
Sbjct: 79 QSIENMIVTTKAGQTENALSKYLPY 103
>SPAC458.06 |||phosphoinositide binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 364
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 717 HDKGIECLSVSADGNRFASGSWDNNVV 797
HD I CL +S G++ AS S + ++
Sbjct: 174 HDSEISCLGISKTGSKIASSSTNGTLI 200
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 496 LSGSYDNSLHIWSTKGQHKLAIPGHTSPVKAVSWVSFQG*SSYI 627
+SGSYD ++ I++ + H + HT ++ V+ V F + YI
Sbjct: 289 VSGSYDKTIRIYNVREGHSRDV-YHTKRMQRVTAVKFSMDAQYI 331
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 717 HDKGIECLSVSADGNRFASGSWDNNVV 797
H K I CL++S DG +G D+ +V
Sbjct: 207 HVKEITCLAISNDGRWIVTGGLDHRIV 233
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 702 ITYRGHDKGIECLSVSADGNRFASGSWDNNV 794
+T + I L+ N FASGSWD N+
Sbjct: 405 VTIPPQPRWITSLAAIPYSNLFASGSWDGNI 435
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Frame = +1
Query: 463 VSAVQAHSS--WILSGSYDNSLHIWSTKGQHKLAIPG---HTSPVKAVS 594
V ++ AHS W+LSG + + ++ST+ Q + HT+PV ++
Sbjct: 191 VYSLAAHSRGLWVLSGVNNGDIILYSTRHQEGYPVTSLKKHTAPVSCLA 239
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +3
Query: 717 HDKGIECLSVSADGNRFASGSWDNNVVF 800
H + CL++ + SGSWD V +
Sbjct: 231 HTAPVSCLALHGSEKKVLSGSWDKMVYY 258
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +3
Query: 669 WNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSWDNNVV 797
WNV ++ +C+ T GH ++CL + + SGS D +++
Sbjct: 117 WNV--STGECVETLIGHTDYVKCLLLLEEEGLLLSGSTDASLI 157
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 654 AILWVWNVPRNSVDCMITYRGHDKGIECLS 743
A L VW+V + GH +GIEC++
Sbjct: 154 ASLIVWDVSSQPSRLLYKLTGHSRGIECIT 183
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 26.6 bits (56), Expect = 4.9
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 460 WVSAVQAHSSWILSGSYDNSLHIWSTK 540
W + S+ ++SG+ DN++ +W K
Sbjct: 56 WTCDINKSSTLMVSGAADNTMRLWDVK 82
>SPAC17D4.02 |cdc45|sna41, goa1|DNA replication pre-initiation
complex subunit Cdc45|Schizosaccharomyces pombe|chr
1|||Manual
Length = 638
Score = 26.6 bits (56), Expect = 4.9
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Frame = +1
Query: 394 LEVEYLGRFPAPTPQD--CLMHDDWVSAVQAHSSW---ILSGSYDNS-LHIWSTKGQHKL 555
LE + +GR TP D + D++ + H S +L +Y S LHIWS +G+ +L
Sbjct: 289 LENQIVGRAHGKTPHDQSIRLEDEFRFMLVRHWSLYDSMLHSAYVGSRLHIWSEEGRKRL 348
>SPBC32F12.02 |rec14||recombination protein
Rec14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 490 WILSGSYDNSLHIWSTK-GQHKLAIPGHTSPVKAVSW 597
+I+SG L + ST+ G+ + GHTSPV++V++
Sbjct: 159 FIVSGHQTGQLFLISTETGRLFHVLSGHTSPVRSVAF 195
>SPAC637.05c |vma2||V-type ATPase V1 subunit B |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 503
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 343 ASLAEHLQEKGVSTEDTLEVEYLGRF 420
AS+ + E+ +S ED L +E+LG+F
Sbjct: 411 ASMKSVVGEEALSQEDRLALEFLGKF 436
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 25.8 bits (54), Expect = 8.6
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 442 CLMHDDWVSAVQAHSSWILSGSYDNSLHIWSTKGQHK---LAIPGHTSPVKAVSWVSF 606
C+ DW A ++LSGS D L +W ++K L GH + + +V +
Sbjct: 47 CVNTLDW----SADGEFLLSGSDDTRLIVWDVFNEYKPRHLISTGHVQNIFSAKFVPY 100
>SPAC11D3.14c |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1260
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 315 FLSMWRVTLCLPRRALTRKRGID 383
F+ + T+C P R LT RG+D
Sbjct: 450 FIQVANETMCRPIRKLTESRGLD 472
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 25.8 bits (54), Expect = 8.6
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +3
Query: 666 VWNVPRNSVDCMITYRGHDKGIECLSVSADGNRFASGSWDNNV 794
VW+V VD + GH I + + D + ASGS+D+ V
Sbjct: 82 VWDVNTGKVDRRLG--GHLAQINTIRYNEDSSILASGSFDSKV 122
>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 391
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 702 ITYRGHDKGIECLSVSADGNRFASGSWDNNV 794
+ GH+ I C++ ++ G SGS D ++
Sbjct: 95 LVLEGHEHNIPCITFNSSGTLLLSGSIDRSL 125
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 25.8 bits (54), Expect = 8.6
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
Frame = +1
Query: 391 TLEVEYLGRFPAPTPQDCL----MHDDWVSAVQ----AHSSWILSGSYDNSLHIWS 534
T + R P C+ +H ++V V SWI S +D SL+IW+
Sbjct: 251 TASYDMTSRIFDPEQHSCIRKVDLHSEFVRDVDWSDFGDGSWIASVGWDESLYIWN 306
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,633,939
Number of Sequences: 5004
Number of extensions: 76539
Number of successful extensions: 360
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 467341524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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