Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_M21
         (951 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0299 - 17051570-17052474,17053542-17053755                       31   1.0  
06_01_0486 - 3455030-3455770                                           30   2.4  
04_03_1022 - 21778315-21779007                                         30   3.1  
07_01_0862 - 7172083-7172931                                           29   5.4  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   5.4  
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239...    29   7.2  
03_01_0515 - 3864796-3865425                                           29   7.2  
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18...    28   9.5  

>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 15/46 (32%), Positives = 18/46 (39%)
 Frame = +3

Query: 690 PPPP*TSIXKIRXPXQXWXKPPRDYKKXPXVPPLXTPPXXPPXSXP 827
           PP P         P   W  PP      P +PP+ +PP  PP   P
Sbjct: 252 PPSPPPPAFPFPLPPWPWAPPPAF--PFPHLPPIFSPPSPPPPPPP 295


>06_01_0486 - 3455030-3455770
          Length = 246

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 18/52 (34%), Positives = 19/52 (36%)
 Frame = +3

Query: 690 PPPP*TSIXKIRXPXQXWXKPPRDYKKXPXVPPLXTPPXXPPXSXPXXXXGT 845
           PP P      I  P   +  PP      P VPP  TPP  PP   P     T
Sbjct: 106 PPTPPYVPPYIPPPTPPYVPPPTPPSPPPYVPP-PTPPSPPPYVPPPSPPAT 156


>04_03_1022 - 21778315-21779007
          Length = 230

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 16/48 (33%), Positives = 16/48 (33%)
 Frame = +3

Query: 672 WRFXXRPPPP*TSIXKIRXPXQXWXKPPRDYKKXPXVPPLXTPPXXPP 815
           WR    PPPP T              PP      P VPP   PP   P
Sbjct: 12  WRVEPPPPPPATRARPPCSSAHLLPPPPPPPPPPPYVPPHLLPPSPAP 59


>07_01_0862 - 7172083-7172931
          Length = 282

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = +3

Query: 693 PPP*TSIXKIRXPXQXWXKPPRDYKKXPXVPPLXTPPXXPPXSXP 827
           PPP     K   P     +PP   K+   +PPL  PP   P   P
Sbjct: 173 PPPLPPKKKPLPPPSPPPQPPLPEKENTPLPPLLLPPKKKPLPPP 217


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 15/46 (32%), Positives = 16/46 (34%)
 Frame = +3

Query: 690 PPPP*TSIXKIRXPXQXWXKPPRDYKKXPXVPPLXTPPXXPPXSXP 827
           PPP   +      P      PP   K  P  PP   PP  PP   P
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGP 362


>06_02_0298 +
           13921310-13921834,13921923-13922063,13923601-13923951,
           13924071-13924130,13924261-13924380,13924569-13924718
          Length = 448

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 13/41 (31%), Positives = 14/41 (34%)
 Frame = +3

Query: 690 PPPP*TSIXKIRXPXQXWXKPPRDYKKXPXVPPLXTPPXXP 812
           PPP    I     P   W  P  D  + P  PP    P  P
Sbjct: 277 PPPSPAPIQHFARPLHVWGHPTMDPSRVPVWPPRHLVPRGP 317


>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 15/46 (32%), Positives = 16/46 (34%)
 Frame = +3

Query: 690 PPPP*TSIXKIRXPXQXWXKPPRDYKKXPXVPPLXTPPXXPPXSXP 827
           PPPP  S+     P      PP      P  PP   PP     S P
Sbjct: 72  PPPPPPSVTSSPPPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPP 117


>05_01_0028 +
           182528-183852,183967-184127,184872-185116,185330-186073
          Length = 824

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
 Frame = +3

Query: 690 PPPP*---TSIXKIRXPXQXWXKPPRDYKKXPXVPP--LXTPPXXPPXSXP 827
           PPPP    T       P     +PPR + + P  PP  L TPP  P    P
Sbjct: 58  PPPPLPTPTVTTPTPPPPPPAPRPPRRHHRIPPPPPPLLPTPPPPPASISP 108


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,844,383
Number of Sequences: 37544
Number of extensions: 208174
Number of successful extensions: 793
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2741249160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)