Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_M17
(944 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit Alp... 151 1e-37
SPAC637.12c |mst1||histone acetyltransferase Mst1|Schizosaccharo... 37 0.004
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 34 0.034
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 33 0.059
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.14
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 31 0.31
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 29 0.72
SPCC576.13 |swc5||chromatin remodeling complex subunit Swc5|Schi... 29 0.72
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 29 0.95
SPBC3H7.12 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 0.95
SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyce... 29 0.95
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 29 1.3
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 29 1.3
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 29 1.3
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 28 1.7
SPAC18G6.07c |mra1||ribosome biogenesis protein Mra1|Schizosacch... 28 1.7
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb... 28 2.2
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 2.9
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 27 2.9
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 27 2.9
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 27 3.8
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 27 3.8
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 27 3.8
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 27 5.1
SPBC14C8.03 |fma2||methionine aminopeptidase Fma2 |Schizosacchar... 27 5.1
SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M... 26 6.7
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 26 6.7
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 26 6.7
SPBC16A3.08c |||nuclear telomere cap complex subunit |Schizosacc... 26 6.7
SPCC553.10 |||conserved fungal protein|Schizosaccharomyces pombe... 26 6.7
SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein At... 26 8.9
SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyce... 26 8.9
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 26 8.9
SPBC1539.05 |cog3||Golgi transport complex subunit Cog3 |Schizos... 26 8.9
SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1 |Schizosaccharo... 26 8.9
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 26 8.9
SPAC607.04 |||inositol polyphosphate kinase |Schizosaccharomyces... 26 8.9
SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomy... 26 8.9
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 8.9
>SPAC23H4.12 |alp13||Clr6 histone deacetylase complex subunit
Alp13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 151 bits (367), Expect = 1e-37
Identities = 94/267 (35%), Positives = 140/267 (52%), Gaps = 10/267 (3%)
Frame = +1
Query: 85 LKFAEGEKVLCFHGPLIYEAKCLKSSVTKDKHVRYLIHYAGWNKNWDEWVPESRVLKYNE 264
+ + E+VLCFHGPL+YEAK + + + D YLIHY GW +WDEWV + R+L++ E
Sbjct: 3 VSYKVNERVLCFHGPLLYEAKIVDTEMKGDV-TTYLIHYKGWKNSWDEWVEQDRILQWTE 61
Query: 265 ANVQRQKEVQRAHSAQPXXXXXXPAKGRKSDAAVAATTPAREESRASTPASSTQVK-ESD 441
N++ QKE++ A + +K S + +T + + S +S+ V +S
Sbjct: 62 ENLKTQKELKNAAIS---TRQKPTSKKSASSTSKHDSTGVKTSGKRSRESSTVTVDGDSH 118
Query: 442 STPAPAKTTKTQS-------KDTPADSGSDQPKKKRGRLDLSIESEEQYLAKVEVKIKIP 600
P+ KT K++S +D D+ +++ K E EE L K KI +P
Sbjct: 119 ELPSRIKTQKSESPIPQQVKRDGTTDAKNEETTKPENNEKDDFE-EEPPLPK--HKISVP 175
Query: 601 EELKVWLVDDWDVITRQQKLAILPAKLTVSQIVDNYLAFKKSSKSH--NQAKESVLVDIT 774
+ LK+WLVDDW+ IT+ Q+L +P TV + AF++S SH N+ V
Sbjct: 176 DVLKLWLVDDWENITKNQQLIAIPRNPTVRAAI---AAFRESKISHLNNEIDVDVFEQAM 232
Query: 775 EGIKEYFNATLGSQLLYXFEXPQYSEI 855
G+ YFN LG+ LLY FE QY EI
Sbjct: 233 AGLVIYFNKCLGNMLLYRFERQQYLEI 259
>SPAC637.12c |mst1||histone acetyltransferase
Mst1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 463
Score = 37.1 bits (82), Expect = 0.004
Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 4/154 (2%)
Frame = +1
Query: 169 KDKHVRYLIHYAGWNKNWDEWVPESRVLKYNEANVQRQKEVQRAHSAQPXXXXXXPAKGR 348
+ + V Y +HY +NK DEW+ + ++ ++AH R
Sbjct: 46 RTRGVVYYVHYNDYNKRLDEWITIDNIDLSKGIEYPPPEKPKKAHGKGKSSKRPKAVDRR 105
Query: 349 KSDAAVAATTPAREESRASTPASSTQVKESD-STPAPAKTTKTQSKDTPADSGSDQPKKK 525
+S A + T P+ + P ST ESD + A ++ +D +S S + + +
Sbjct: 106 RSITAPSKTEPSTPST--EKPEPSTPSGESDHGSNAGNESLPLLEEDHKPESLSKEQEVE 163
Query: 526 RGRLDLSIESEEQYLAKVEVKIKI---PEELKVW 618
R R S+ +A++ KI E++ W
Sbjct: 164 RLRFSGSMVQNPHEIARIRNINKICIGDHEIEPW 197
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 33.9 bits (74), Expect = 0.034
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Frame = +1
Query: 373 TTPAREESRASTPASSTQVKESDSTPAPAKTTKTQS-KDTPADSGSDQPKKKRGRLDLSI 549
T+ A++E+ ST A + DST T K S +DT A++ + P KK+ ++
Sbjct: 565 TSKAQQEAN-STTAEGKEKLSGDSTETGNSTNKEASTEDTKANATASAPNKKK----KTV 619
Query: 550 ESEEQYLAKVEVKIKIPEELKVWLVDDWDVITRQQKLAIL 669
E+ +Q + K + +IP K+ + ++ T +K + L
Sbjct: 620 ETLQQQVIKEIARKEIPRVYKIIQQNQYNRSTNARKTSQL 659
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 33.1 bits (72), Expect = 0.059
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +1
Query: 370 ATTPAR--EESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDL 543
+TTP + +++ A+ P + V+ S T PA+ T++ +K ++ R R
Sbjct: 927 STTPQKFDDDAWANKPVTEPPVRASSVTVEPARVTESMNKMNISEEAKKPEAPSRPRTAP 986
Query: 544 SIESEEQYLAKVEVK 588
E EEQ A VE K
Sbjct: 987 IPEPEEQKKAPVEKK 1001
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.14
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +1
Query: 379 PAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESE 558
P+ E STP SS S+++P+P T+ + + PA + + K K R + S S
Sbjct: 1242 PSSEAPSVSTPRSSVPSPHSNASPSP--TSSSMASAAPARTSVSRSKSKAERHETSTSSR 1299
Query: 559 E 561
+
Sbjct: 1300 K 1300
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 30.7 bits (66), Expect = 0.31
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 430 KESDSTPAPAKTTKTQSKDTPADSGSDQPKKKR 528
+E D+TP P T+K S+ P + G+ + K R
Sbjct: 88 EEEDATPEPVVTSKKNSRSKPKNGGASKRKASR 120
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 29.5 bits (63), Expect = 0.72
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +1
Query: 376 TPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDL 543
TP ++ S TP+SST S P P+ + + SKD ++K+ R+ L
Sbjct: 607 TPEKDRSLNVTPSSSTPTPASVLAP-PSSASLSSSKDANRSVPESPRREKKNRVTL 661
>SPCC576.13 |swc5||chromatin remodeling complex subunit
Swc5|Schizosaccharomyces pombe|chr 3|||Manual
Length = 215
Score = 29.5 bits (63), Expect = 0.72
Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Frame = +1
Query: 334 PAKGRKSDAA---VAATTPAREESRASTPASSTQVKESDS-----TPAPAKTTKTQSKDT 489
P + +S+A V +TT ++ ++S+ E D TP + + + +
Sbjct: 84 PQQSNESEAIEKPVQSTTEVELKTNELAESNSSVAVEGDENSYAETPKKKHSLIRKRRKS 143
Query: 490 PADSGSDQPKKKRGRLDLSIESEEQYLAKVEVKIKIPEELKVWLVDDWDVITRQQKLA 663
P DS S Q K+ +L+ ++E +Q +K + I +EL++ D + + RQ+ LA
Sbjct: 144 PLDSSSAQKVLKKNKLN-TLEQAQQNWSKYIKEQDIQDELRIANKDGY--VERQEFLA 198
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 29.1 bits (62), Expect = 0.95
Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 6/179 (3%)
Frame = +1
Query: 91 FAEGEKVLCFHGPLIYE-AKCLKSSVTKDKHVRYLIHYAGWNKNWDEWVPESRVLKYNE- 264
FA +++ FH + K +K +K+ + ++ W +E S ++ NE
Sbjct: 26 FAYSAEIIYFHAETTFLFEKIMKEGNELEKYSKIELNSEIWEDEEEE--DNSGIVSQNER 83
Query: 265 ----ANVQRQKEVQRAHSAQPXXXXXXPAKGRKSDAAVAATTPAREESRASTPASSTQVK 432
N QR+ + + + R S + P+ + SRA++P S +
Sbjct: 84 LMKLVNKQREIIYELHKDLEKVKKDNTSLRMRLSKYESTDSFPSSQPSRANSPQSDSYSS 143
Query: 433 ESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEEQYLAKVEVKIKIPEEL 609
+ K + SKD P S +S+ + Y ++K + + L
Sbjct: 144 PYEKGKLFPKISLKSSKDVPTASAHISSSDHEKSSSVSLSALNNYNKTTDIKARSLDRL 202
>SPBC3H7.12 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 287
Score = 29.1 bits (62), Expect = 0.95
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 139 HKLAVRGNIALFHLQQILTLVPLLHNVIICLPK 41
H L ++ + A+ HL QIL L +H + CLP+
Sbjct: 83 HVLKLKDS-AIIHLDQILNLSNYMHYALYCLPR 114
>SPCPB1C11.01 |amt1||ammonium transporter Amt1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 497
Score = 29.1 bits (62), Expect = 0.95
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 415 SSTQVKESDSTPAPAKTTKTQ-SKDTPADSGSDQPKKKRGRLDLSIESEEQYLAKVEVK 588
S+ K+S P P T+ Q + T +DS S++ K++ R + EE+Y A+ E +
Sbjct: 436 SAYYYKDSTDEPPPITTSGVQYTSPTVSDSASNE-KEQEHRAQNEAQKEEEYRAESEAQ 493
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/46 (23%), Positives = 21/46 (45%)
Frame = +1
Query: 100 GEKVLCFHGPLIYEAKCLKSSVTKDKHVRYLIHYAGWNKNWDEWVP 237
G ++ CFH + ++CLK + +H + + N W +P
Sbjct: 720 GSELRCFHCSISCHSRCLKRLFAESEHEKTMSETVSENSKWMPEMP 765
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 28.7 bits (61), Expect = 1.3
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Frame = +1
Query: 304 SAQPXXXXXXPAKGRKSDAAVAATTPAREESRAST-PASS--TQVKESD-STPAPA-KTT 468
S P AK S A P S +T PA+ T +D +T PA +TT
Sbjct: 208 SNPPHTEEPVAAKPEASSTATKGPRPTTSASNTNTSPANGAPTNKPSTDINTTDPATQTT 267
Query: 469 KTQSKDTPADSGSDQPKKKRGR 534
+ + ++PA SGS P R
Sbjct: 268 QVSASNSPALSGSSTPSNTSSR 289
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 28.7 bits (61), Expect = 1.3
Identities = 30/126 (23%), Positives = 54/126 (42%)
Frame = +1
Query: 370 ATTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSI 549
AT P R++ R +V++++ P K + A S + K+KR
Sbjct: 481 ATIPYRDQVREQARRRRLEVEKTE----PKKLARPAKIKNEAWSKQKEVKEKRNTRREKR 536
Query: 550 ESEEQYLAKVEVKIKIPEELKVWLVDDWDVITRQQKLAILPAKLTVSQIVDNYLAFKKSS 729
+S++++L K + K + LK +V + I +S++ ++Y KKS
Sbjct: 537 KSKKEFL-KAQ-KNEASNNLKQEIVSKAGAQETENDDLIDEESDALSELEEDYRQLKKSK 594
Query: 730 KSHNQA 747
K NQA
Sbjct: 595 KRKNQA 600
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 352 SDAAVAATTPAREESRASTPASSTQVKESDST-PAPAKTTKTQSKDT 489
S AA +ATTPA TP+++ V+ + ST P A T + T
Sbjct: 532 SKAARSATTPAYVGGATKTPSTTKAVESTPSTLPTSASTNAAATTTT 578
>SPAC18G6.07c |mra1||ribosome biogenesis protein
Mra1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 359
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 508 DQPKKKRGRLDLSIESEEQYLAKVEVKIKIPEELK 612
D P K GRL + I + ++ L +V ++IP K
Sbjct: 208 DSPLNKAGRLQVYIHTAKKVLIEVNPSVRIPRTFK 242
>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 741
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 352 SDAAVAATTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADS 501
++ V T P +S STP + ++ + A+ ++ + TP+DS
Sbjct: 240 TNTPVENTHPENPDSNTSTPTTRSEPLAGEGASIDAENASSRQETTPSDS 289
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.5 bits (58), Expect = 2.9
Identities = 22/88 (25%), Positives = 33/88 (37%)
Frame = +1
Query: 337 AKGRKSDAAVAATTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQP 516
A G K + +TP + + A AS T + PAPA +TKT + Q
Sbjct: 135 ASGSKYSVHTSNSTP-QSKHNAFYDASQTFGSTAKVAPAPAPSTKTPLANISKPVVQAQK 193
Query: 517 KKKRGRLDLSIESEEQYLAKVEVKIKIP 600
K D S + A +++P
Sbjct: 194 DSKDNSWDDSSKQSNTQTANTTSNLRVP 221
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 27.5 bits (58), Expect = 2.9
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +1
Query: 352 SDAAVAATTPAREESRAST--PASSTQVKESDSTPAPAKTTK-TQSKDTPADSGSDQP 516
S V T P S ST P +ST + S+P P+ +T T S P S P
Sbjct: 297 STTPVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTP 354
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 27.5 bits (58), Expect = 2.9
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +1
Query: 349 KSDAAVAATTPA-----REESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGS 507
KS A+ A PA + E+ +ST A ST ++ + AP+ T + + P D+ +
Sbjct: 83 KSAASPAPNPPASVPEKKVEAPSSTVAESTSTTQTVAAAAPSNPDTTATSEAPIDANT 140
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 27.1 bits (57), Expect = 3.8
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 388 EESRASTPASSTQVKESDSTPAP-AKTTKTQSKDTPADSGSDQPKK 522
EE S S+++ E DS PA A+ K ++KD + PKK
Sbjct: 157 EEESESEDNSASEEDELDSAPAKKAQVKKKRTKDESEQEEAASPKK 202
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 27.1 bits (57), Expect = 3.8
Identities = 24/97 (24%), Positives = 36/97 (37%)
Frame = +1
Query: 208 WNKNWDEWVPESRVLKYNEANVQRQKEVQRAHSAQPXXXXXXPAKGRKSDAAVAATTPAR 387
W N +W+ + + L Y E + ++ Q+ S K RKS A TPA
Sbjct: 22 WINNGAKWLEDIQ-LYYKERSSIEKEYAQKLASLS---NKYGEKKSRKSSALSVGDTPAM 77
Query: 388 EESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPAD 498
+ +T K D +KT + S D D
Sbjct: 78 SAGSLECASLTTWSKILDELTRSSKTHQKLSDDYSLD 114
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 400 ASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGS 507
+S+ SST S S+P+ + TT T S + + S S
Sbjct: 128 SSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSS 163
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 26.6 bits (56), Expect = 5.1
Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 3/149 (2%)
Frame = +1
Query: 133 IYEAK-CLKSSVTKDKHVRYLIHYAGWNKNWDEWVPESRVLKYNEA--NVQRQKEVQRAH 303
+YE + L V K+ Y I +AG++ + W PE + + +++K++
Sbjct: 21 VYEVEDILADRVNKNGINEYYIKWAGYDWYDNTWEPEQNLFGAEKVLKKWKKRKKLIAKG 80
Query: 304 SAQPXXXXXXPAKGRKSDAAVAATTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSK 483
+P AK K + + + +S + + + K PA+ T +
Sbjct: 81 LLEPFDAEDNEAKKMKREKEILRQQRQKRKSELTQLSQKVKEKFKKMRKKPARRIVTIAN 140
Query: 484 DTPADSGSDQPKKKRGRLDLSIESEEQYL 570
D + + R + E +E+ L
Sbjct: 141 DEEEEDDQTMDEDAFERKSMQGELKERNL 169
>SPBC14C8.03 |fma2||methionine aminopeptidase Fma2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 26.6 bits (56), Expect = 5.1
Identities = 30/134 (22%), Positives = 56/134 (41%), Gaps = 7/134 (5%)
Frame = +1
Query: 373 TTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIE 552
T+ E+ A +KE+D K + + + A +G + KKK+
Sbjct: 2 TSATTTEATAKDLQEKLSLKENDVVEDDGKVEENDAAEEGASNGEKKKKKKKKSSKKKKT 61
Query: 553 SEEQY------LAKVEVKIKIP-EELKVWLVDDWDVITRQQKLAILPAKLTVSQIVDNYL 711
+EQ L+K+ V K P E+ + D+ T ++K A+ Q D Y
Sbjct: 62 PQEQTNPPTVGLSKIFVNKKYPVGEVCDYAEDNLWRTTDEEKRAL------DRQNFDQYN 115
Query: 712 AFKKSSKSHNQAKE 753
+++++ H QA++
Sbjct: 116 DLRRAAEVHRQARQ 129
>SPBC27.04 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1052
Score = 26.2 bits (55), Expect = 6.7
Identities = 25/108 (23%), Positives = 48/108 (44%)
Frame = +1
Query: 436 SDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEEQYLAKVEVKIKIPEELKV 615
+++ P +T + AD SD + + + YL++ K + + L +
Sbjct: 392 AENNDKPKETMPCTYDSSLADDHSDTSNLSKDKANTLCAQCSVYLSE---KYQQQQSL-L 447
Query: 616 WLVDDWDVITRQQKLAILPAKLTVSQIVDNYLAFKKSSKSHNQAKESV 759
L + + ++K A L K +SQI L F++ K+H+ AK+ V
Sbjct: 448 QLESNIQQLENEKKAAKLIEKDLLSQISHVKLQFEQQIKAHHYAKDQV 495
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 433 ESDSTPAPAKTTKTQSK--DTPADSGSDQPKKKRGRLDLSIESEEQYLAK 576
ES++ P + + + +TPA + + +PKKKRG ++ SE + L +
Sbjct: 1018 ESEARPTRGRPKRNIASVDETPALTLNGKPKKKRGPAPDTLTSEHRSLLR 1067
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 376 TPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPKK 522
T A ++ + PA+ ++ + TPAP T+++ K+T A + P K
Sbjct: 141 TKAPTTTKPAAPAAQSKTE----TPAPKVTSESTKKETAAPPPQETPTK 185
>SPBC16A3.08c |||nuclear telomere cap complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 284
Score = 26.2 bits (55), Expect = 6.7
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 12/63 (19%)
Frame = +1
Query: 376 TPAREESRASTPASSTQVKESDSTPAP----AKTTKTQSKD----TP----ADSGSDQPK 519
TPA + T AS + K SDS P P A++T ++ +D TP + +DQP+
Sbjct: 16 TPAATTTEKKTAASRDK-KRSDSPPVPRELVAQSTTSRKRDPNQPTPRERTVNKKADQPR 74
Query: 520 KKR 528
++R
Sbjct: 75 RRR 77
>SPCC553.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 349
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/54 (22%), Positives = 25/54 (46%)
Frame = +1
Query: 367 AATTPAREESRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKR 528
AA++ + S +S+ SST S +TP+ ++ + S + + S +
Sbjct: 114 AASSSSSSSSSSSSLVSSTTSSSSSATPSTTSSSSSSSSSSSSSSSKSSSSSSK 167
>SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein Atg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 25.8 bits (54), Expect = 8.9
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 346 RKSDAAVAATTPAREE-SRASTPASSTQVKESDSTPAPAKTTKTQSKDTPADSGSDQPKK 522
RKS + + A + R S ++ E STPA + TKT S + G Q K
Sbjct: 638 RKSQSPICARSATSAGLPRFEYHTSLSKSLEHSSTPASLQATKTPSPSFVLEPGIPQEYK 697
Query: 523 K 525
K
Sbjct: 698 K 698
>SPAC56F8.16 |esc1||transcription factor Esc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 413
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/65 (23%), Positives = 26/65 (40%)
Frame = +1
Query: 301 HSAQPXXXXXXPAKGRKSDAAVAATTPAREESRASTPASSTQVKESDSTPAPAKTTKTQS 480
HSA P + +++T ST ASS+ + S +PA ++ T
Sbjct: 138 HSAVPHRSSQFQSTTLTPSTTDSSSTDVSSSDSVSTSASSSNASNTVSVTSPASSSATPL 197
Query: 481 KDTPA 495
+ P+
Sbjct: 198 PNQPS 202
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 394 SRASTPASSTQVKES-DSTPAPAKTTKTQSKDTPADSGS 507
S+ ST S++Q+K S +S + +T T+ + P SGS
Sbjct: 21 SKTSTTPSTSQLKHSHESNVKMSTSTVTEHRKKPTGSGS 59
>SPBC1539.05 |cog3||Golgi transport complex subunit Cog3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/51 (29%), Positives = 19/51 (37%)
Frame = -3
Query: 342 LCGSFLSFSWLCGMSSLDFFLPLYICFIVLQNTAFRHPFIPIFVPSRVMNK 190
LC + LC SLD FLP + T P + + S M K
Sbjct: 282 LCPTITELCKLCSKESLDAFLPAFYDVYFQCRTRLLKPVLDYHLKSFFMEK 332
>SPAPB1A10.06c |||ATP-dependent RNA helicase Dhr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1183
Score = 25.8 bits (54), Expect = 8.9
Identities = 27/118 (22%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Frame = +1
Query: 427 VKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEEQYLAKVEVKIKIPEE 606
V+E +S+ + ++D+ A+ D PK++R + E ++Q L + E I ++
Sbjct: 32 VREQESSSEVHANPEPDNQDSNAEILIDVPKEERQKRKQ--ELKDQLLKENEGSISSKKK 89
Query: 607 LKVWLVDDW-DVITRQQKLAILPAKLTVSQIVDNYLAFKKSSKSHNQAKESVLVDITE 777
++ D + + +++++A L AKL +I + L+ K+ AKE + + E
Sbjct: 90 KRL---DKYIENKLKKEEVASLIAKLAEERIDTSLLSSSKNLGKQATAKEKLKKSLLE 144
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 418 STQVKESDSTPAPAKTTKTQSKDTPADSGSDQPKKKRGRLDLSIESEEQY 567
STQV + + + S +P S S + K+ GRL +S +S++++
Sbjct: 652 STQVPVTPKQKSSTANKGSTSSPSPPSSESKKTKRSWGRLFVSGDSDKEH 701
>SPAC607.04 |||inositol polyphosphate kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 268
Score = 25.8 bits (54), Expect = 8.9
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +1
Query: 148 CLKSSVTKDKHVRYLIHYAGW-NKNWDEWVPESR 246
C+KS V K I W KN+ EW+P SR
Sbjct: 29 CIKSEVDFYKTCNDNITLYNWIPKNFGEWMPSSR 62
>SPAC139.01c ||SPAC955.02c|nuclease, XP-G family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 802
Score = 25.8 bits (54), Expect = 8.9
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +1
Query: 538 DLSIESEEQYLAKVEVKIKI---PEELKVWLVDD 630
DLSI S ++LAKV + I PE K+ +VD+
Sbjct: 623 DLSITSATEFLAKVATFLPIKQRPEVSKISIVDE 656
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 25.8 bits (54), Expect = 8.9
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
Frame = +1
Query: 379 PAREESRASTPASSTQVKESDSTPAPAK---TTKTQSKDTPADSG-SDQP 516
P R S S +S + S STP+ + TT + S D P+ G SD P
Sbjct: 106 PTRLTSTPSNSSSLPSIPSSSSTPSISSIPHTTSSVSNDIPSVLGSSDHP 155
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.130 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,344,464
Number of Sequences: 5004
Number of extensions: 62437
Number of successful extensions: 285
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 278
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 481321826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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