Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_M12
(987 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 41 3e-04
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 38 0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.007
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 0.040
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.14
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.19
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.25
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.58
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 30 0.58
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.0
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 9.4
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 9.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/43 (44%), Positives = 20/43 (46%)
Frame = +3
Query: 525 APPPPPXPXXPPPXXXXXXGGXPPPPXXGGXPPPPPRXXXPPG 653
+PPPPP P PP P GG PPPPP PPG
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP----PPG 769
Score = 39.1 bits (87), Expect = 0.001
Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = +3
Query: 528 PPPPPXPXXPPPXXXXXXGGXPPPPXXG----GXPPPPP 632
P P P P PP G PPPP G G PPPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 37.9 bits (84), Expect = 0.002
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +3
Query: 528 PPPPPXPXXPPPXXXXXXGGXPPPPXXGGXPPPPPRXXXP 647
P P P P PP PPPP G PPPP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 35.5 bits (78), Expect = 0.012
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 725 PPPPPPPXXTXXPXPXPPXGXRXAXPPP 808
P PPP P P P PP G A PPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 34.3 bits (75), Expect = 0.027
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 874 PPPXXNPXPXPPPPXGXGGXXPNPPRXXXPA 966
P P P PPPP G G P PP PA
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 31.5 bits (68), Expect = 0.19
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Frame = +2
Query: 725 PPPPPP----PXXTXXPXPXPPXGXRXAXPPP 808
PPPPPP P P P PP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP 763
Score = 29.9 bits (64), Expect = 0.58
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 874 PPPXXNPXPXPPPPXGXGGXXPNPP 948
P P P P PPP GG P PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 29.5 bits (63), Expect = 0.76
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 713 GXXXPPPPPPPXXTXXPXPXPP 778
G PPPPPP P P PP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPP 780
Score = 28.3 bits (60), Expect = 1.8
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = +3
Query: 336 LXKRRPPPXXGLXXPPXTXXKXPPPPPXXPLXSPP 440
L K PPP + P P PPP + PP
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP 762
Score = 28.3 bits (60), Expect = 1.8
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 659 PPXPXXXXXXXXXXXGGAGXXXPPPPPPPXXTXXPXPXPPXGXRXAXPPP 808
PP P G PPPPPPP P G R P P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPP-----PPAVSAGGSRYYAPAP 797
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 330 SPLXKRRPPPXXGLXXPPXTXXKXPPPPPXXP 425
+P+ PPP PP PPPPP P
Sbjct: 755 APIMGGPPPPPP----PPGVAGAGPPPPPPPP 782
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 37.5 bits (83), Expect = 0.003
Identities = 25/100 (25%), Positives = 28/100 (28%)
Frame = +3
Query: 351 PPPXXGLXXPPXTXXKXPPPPPXXPLXSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP 530
P P + PP PP P + +PP AP
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSG---AP 1159
Query: 531 PPPPXPXXPPPXXXXXXGGXPPPPXXGGXPPPPPRXXXPP 650
P P PP G P P G PP PP PP
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 35.9 bits (79), Expect = 0.009
Identities = 26/104 (25%), Positives = 28/104 (26%), Gaps = 1/104 (0%)
Frame = +3
Query: 351 PPPXXGLXXPPXTXXKXPPPPPXXPLXSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP 530
P P + PP PP P +PP A
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSV---AA 1149
Query: 531 PPPPXPXXPPPXXXXXXGGXPPPPXXGGXPP-PPPRXXXPPGXP 659
PP P P PP P P G PP P P PP P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 35.1 bits (77), Expect = 0.015
Identities = 27/107 (25%), Positives = 30/107 (28%)
Frame = +3
Query: 330 SPLXKRRPPPXXGLXXPPXTXXKXPPPPPXXPLXSPPXXXXXXXXXXXXXXXXXXXXXXX 509
+PL + P P PP PP P +PP
Sbjct: 1006 APLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPP---------VPIPTSTPPVPKSS 1056
Query: 510 XXXXXAPPPPPXPXXPPPXXXXXXGGXPPPPXXGGXPPPPPRXXXPP 650
APPP P P P G P P G P P P PP
Sbjct: 1057 SGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Score = 33.9 bits (74), Expect = 0.035
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +3
Query: 531 PPPPXPXXPPPXXXXXXGGXPPPPXXGGXPPPPPRXXXPP 650
PP P P PP G P PP P P P PP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 31.9 bits (69), Expect = 0.14
Identities = 23/100 (23%), Positives = 26/100 (26%)
Frame = +3
Query: 351 PPPXXGLXXPPXTXXKXPPPPPXXPLXSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP 530
P P + PP PP P + +PP
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGI--- 1178
Query: 531 PPPPXPXXPPPXXXXXXGGXPPPPXXGGXPPPPPRXXXPP 650
PP P P P P P G PP PP PP
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Score = 30.7 bits (66), Expect = 0.33
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +3
Query: 531 PPPPXPXXPPPXXXXXXGGXPPPPXXGGXPP-PPPRXXXPP 650
PP P P P PP P G PP P P PP
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPP 1132
Score = 29.9 bits (64), Expect = 0.58
Identities = 22/103 (21%), Positives = 22/103 (21%)
Frame = +3
Query: 342 KRRPPPXXGLXXPPXTXXKXPPPPPXXPLXSPPXXXXXXXXXXXXXXXXXXXXXXXXXXX 521
K P P PP PP P P
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Query: 522 XAPPPPPXPXXPPPXXXXXXGGXPPPPXXGGXPPPPPRXXXPP 650
PP P P PP P P PP P PP
Sbjct: 1080 SGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Score = 29.1 bits (62), Expect = 1.0
Identities = 20/76 (26%), Positives = 20/76 (26%)
Frame = +2
Query: 728 PPPPPPXXTXXPXPXPPXGXRXAXPPPXIXXXXXXXXXXXXXXXXXXXXPPXXXTPXPXP 907
PP P P P P P G P P P P P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGI-PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Query: 908 PXPXGXGGXPPTXPXP 955
P P G PP P P
Sbjct: 1218 PVPTPSAGLPPV-PVP 1232
Score = 27.9 bits (59), Expect = 2.3
Identities = 20/85 (23%), Positives = 21/85 (24%)
Frame = +2
Query: 728 PPPPPPXXTXXPXPXPPXGXRXAXPPPXIXXXXXXXXXXXXXXXXXXXXPPXXXTPXPXP 907
PP P P P P P G PPP PP P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGV-PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Query: 908 PXPXGXGGXPPTXPXPXXXPXRAXP 982
P P PP P + P
Sbjct: 1228 PVPVPTAKAPPVPAPSSEAPSVSTP 1252
Score = 27.5 bits (58), Expect = 3.1
Identities = 25/108 (23%), Positives = 26/108 (24%)
Frame = +2
Query: 659 PPXPXXXXXXXXXXXGGAGXXXPPPPPPPXXTXXPXPXPPXGXRXAXPPPXIXXXXXXXX 838
PP P PPP P P + P P G P I
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAP-SSEIPSIPAPSGAPPVPAPSGIPPVPKPSV 1099
Query: 839 XXXXXXXXXXXXPPXXXTPXPXPPXPXGXGGXPPTXPXPXXXPXRAXP 982
PP P PP P PP P P P P
Sbjct: 1100 AAPPVPKPSVAVPP-VPAPSGAPPVPKPSVAAPPV-PVPSGAPPVPKP 1145
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/43 (30%), Positives = 13/43 (30%)
Frame = +3
Query: 531 PPPPXPXXPPPXXXXXXGGXPPPPXXGGXPPPPPRXXXPPGXP 659
PP P P PP G PP P P G P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAP 1083
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 531 PPPPXPXXPPPXXXXXXGGXPPPPXXGGXPPPPP 632
PP P P PP G PP P PP P
Sbjct: 1208 PPVPPPSTAPP-VPTPSAGLPPVPVPTAKAPPVP 1240
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.007
Identities = 28/115 (24%), Positives = 29/115 (25%), Gaps = 7/115 (6%)
Frame = +2
Query: 659 PPXPXXXXXXXXXXXGGAGXXXPPPPPPP-XXTXXPXPXPPXGXRXAXPPPXIXXXXXXX 835
PP G + PPPPPPP P PP G PPP
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGR 374
Query: 836 XXXXXXXXXXXXXPPXXXTPXP------XPPXPXGXGGXPPTXPXPXXXPXRAXP 982
PP P PP P P P P A P
Sbjct: 375 QPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPP 429
Score = 34.3 bits (75), Expect = 0.027
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 546 PXXPPPXXXXXXGGXPPPPXXGGXPPPPPRXXXP 647
P PPP G P PP PPPPP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +3
Query: 525 APPPPPXPXXPPPXXXXXXGGXPPPPXXGGXPPPPPRXXXPPGXPL 662
AP PP P P G PP P PPP P P+
Sbjct: 443 APAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAPV 488
Score = 30.7 bits (66), Expect = 0.33
Identities = 27/113 (23%), Positives = 28/113 (24%), Gaps = 6/113 (5%)
Frame = +3
Query: 351 PPPXXGLXXPPXTXXKXPPPPPXXPLXSPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP 530
PPP + K PPPP P P
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352
Query: 531 PPP---PXPXXPPPXXXXXXGGXPPPPXXG---GXPPPPPRXXXPPGXPLLXP 671
PP P PPP G PPP PP PP P L P
Sbjct: 353 LPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPP 405
Score = 30.3 bits (65), Expect = 0.44
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 531 PPPPXPXXPPPXXXXXXGGXPPPPXXGGXPPPPPRXXXPPGXPLLXP 671
PP P P PP PP G P PP PP P+ P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP---LPPSAPIAPP 458
Score = 28.7 bits (61), Expect = 1.3
Identities = 30/118 (25%), Positives = 33/118 (27%), Gaps = 10/118 (8%)
Frame = +3
Query: 348 RPPPXXGLXXPPXTXXKX----PPPPPXXPLXSPPXXXXXXXXXXXXXXXXXXXXXXXXX 515
R P G PP + + P PPP P S P
Sbjct: 367 RSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPS 426
Query: 516 XXXA-PP--PPPXPXXPPPXXXXXXGGXPPPPXXGGXP--PP-PPRXXXPPGXPLLXP 671
+ PP PP P P PP G P PP PP PP P P
Sbjct: 427 APPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = +3
Query: 525 APP-PPPXPXXPPPXXXXXXGGXPPPPXXGGXPPPPPRXXXPPGXP 659
APP PP P PP PPP PP PP P
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPI---PPPSNGTVSSPPNSP 271
Score = 27.1 bits (57), Expect = 4.1
Identities = 13/50 (26%), Positives = 14/50 (28%)
Frame = +2
Query: 659 PPXPXXXXXXXXXXXGGAGXXXPPPPPPPXXTXXPXPXPPXGXRXAXPPP 808
PP P PPPPPP P + PPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPP 339
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = +1
Query: 892 PXPXPPPPXGXGGXXPN-PPRXXXP 963
P P PPP G PN PPR P
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAP 277
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 27.9 bits (59), Expect(2) = 0.040
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Frame = +3
Query: 537 PPXPXX-PPPXXXXXXGGXPP--PPXXGGXPPPPPRXXXPP 650
PP P PPP PP P PP PP+ PP
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/48 (31%), Positives = 15/48 (31%), Gaps = 5/48 (10%)
Frame = +3
Query: 531 PPPPXPXXPPPXXXXXXGGXPPPPXXGGXP-----PPPPRXXXPPGXP 659
PP P PP PPP P PP P PP P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 27.1 bits (57), Expect = 4.1
Identities = 15/50 (30%), Positives = 16/50 (32%), Gaps = 2/50 (4%)
Frame = +3
Query: 528 PPPPPXPXXPPPXXXXXXGGXPPPPXXGGXP--PPPPRXXXPPGXPLLXP 671
PPP P P P PPP P PP P P + P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Frame = +3
Query: 333 PLXKRRPPPXXGLXXP--PXTXXKXPPPPPXXPLXSPP 440
P+ + PP L P P K PP P P PP
Sbjct: 159 PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Score = 26.2 bits (55), Expect = 7.1
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Frame = +3
Query: 528 PPP--PPXPXXPPPXXXXXXGGXPPPPXXGGXPPPP 629
PPP P P PP PP P PPPP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPK--VPPPP 205
Score = 25.8 bits (54), Expect = 9.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 725 PPPPPPPXXTXXPXPXPP 778
PPPPPP P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
Score = 24.6 bits (51), Expect(2) = 0.040
Identities = 10/30 (33%), Positives = 12/30 (40%)
Frame = +3
Query: 351 PPPXXGLXXPPXTXXKXPPPPPXXPLXSPP 440
PP PP + P PP P +PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPP 159
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.9 bits (69), Expect = 0.14
Identities = 19/44 (43%), Positives = 19/44 (43%)
Frame = -3
Query: 658 GXPGGXXXRGGGGGXPPXXGGGGXPPXXXXXXGGGXXGXGGGGG 527
G PGG GG G P GGG GGG G GGG G
Sbjct: 228 GGPGGFEGGPGGFGGGPGGFGGGL-----GGFGGGPGGFGGGPG 266
Score = 30.3 bits (65), Expect = 0.44
Identities = 28/91 (30%), Positives = 28/91 (30%)
Frame = -3
Query: 802 GGGXXTXXXGXXXRXXGPXGXXXXGWXAXPRPPXXXXXXXXXXXGXRRGXPGGXXXRGGG 623
GGG G GP G G G G PGG GG
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFG--GGP 244
Query: 622 GGXPPXXGGGGXPPXXXXXXGGGXXGXGGGG 530
GG GG G P GGG G GG G
Sbjct: 245 GGFGGGLGGFGGGP---GGFGGGPGGHGGPG 272
Score = 30.3 bits (65), Expect = 0.44
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -3
Query: 652 PGGXXXRGGGGGXPPXXGGGGXPPXXXXXXGGGXXGXGGGGG 527
PGG GG GG GG G GG G GGG G
Sbjct: 204 PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG 245
Score = 30.3 bits (65), Expect = 0.44
Identities = 20/48 (41%), Positives = 20/48 (41%)
Frame = -3
Query: 670 GXRRGXPGGXXXRGGGGGXPPXXGGGGXPPXXXXXXGGGXXGXGGGGG 527
G G GG GG GG GG G P GGG G GGG G
Sbjct: 217 GHHHGGHGGFG--GGPGGFEGGPGGFGGGPGGF---GGGLGGFGGGPG 259
Score = 29.5 bits (63), Expect = 0.76
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Frame = -3
Query: 649 GGXXXRGGGGGXPPXXGGGGXPPXXXXXXG---GGXXGXGGGGG 527
GG GGG G PP GG G GG G GGG G
Sbjct: 188 GGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPG 231
Score = 29.5 bits (63), Expect = 0.76
Identities = 21/75 (28%), Positives = 21/75 (28%)
Frame = -1
Query: 948 GXVGGXPPXPXGXGGXGXGVXXXXXXXXXXXXXXXXXXXXXXXXXIXGGGXAXRXPXGGX 769
G GG PP P G GG G GG GG
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGF 254
Query: 768 GXGXMVXXGGGGGGG 724
G G GG GG G
Sbjct: 255 GGGPGGFGGGPGGHG 269
Score = 29.1 bits (62), Expect = 1.0
Identities = 25/87 (28%), Positives = 25/87 (28%)
Frame = -3
Query: 625 GGGXPPXXGGGGXPPXXXXXXGGGXXGXGGGGGAXXXXXXXXXXXXXXXXXXXXXXXXXX 446
GGG GG G PP GG G GG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGG-FGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG 245
Query: 445 XXGGEXRGXXGGGGGXFXXVXGGXXKP 365
GG G GGG G F GG P
Sbjct: 246 GFGG-GLGGFGGGPGGFGGGPGGHGGP 271
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.19
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = +3
Query: 528 PPPPPXPXXPPPXXXXXXGGXPPPPXXGGXPPPPPRXXXPPGXP 659
PPPPP PPP G P PPPP P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPP------SAPPPPLPASSAPSVP 1744
Score = 31.1 bits (67), Expect = 0.25
Identities = 14/30 (46%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Frame = +2
Query: 725 PPPPPPPXXTXXPXPXPPX--GXRXAXPPP 808
P PPPPP P PP G A PPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 30.7 bits (66), Expect = 0.33
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +3
Query: 525 APPPPPXPXXPPPXXXXXXGGXPPPPXXGGXPPPPPRXXXPP 650
APP P PPP PPPP P PP PP
Sbjct: 1698 APPQMSAPTPPPPPM-----SVPPPPSAPPMPAGPPSAPPPP 1734
Score = 30.3 bits (65), Expect = 0.44
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +3
Query: 525 APPPPPXPXXPPPXXXXXXGGXPPPPXXGGXPPPPPRXXXPPGXPLLXP 671
A P P P PPP PPPP P G P P
Sbjct: 1684 AHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 27.1 bits (57), Expect = 4.1
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = +3
Query: 354 PPXXGLXXPPXTXXKXPPPPPXXPLXSPP 440
PP PP PPPP P+ + P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.1 bits (67), Expect = 0.25
Identities = 21/48 (43%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = -3
Query: 661 RGXPGGXXXRGGGGGXPPXXGG--GGXPPXXXXXXGGGXXGXGGGGGA 524
RG GG RGG GG GG GG GG G GG GGA
Sbjct: 8 RGGRGGS--RGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGA 53
Score = 29.9 bits (64), Expect = 0.58
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Frame = -3
Query: 670 GXRRGXPGGXXXRGG-GGGXPPXXGGG-GXPPXXXXXXGGGXXGXGGGGG 527
G R G G RGG GGG GGG G GG G GG G
Sbjct: 13 GSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Score = 28.3 bits (60), Expect = 1.8
Identities = 22/52 (42%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Frame = -3
Query: 670 GXRRGXPGGXXXRGG--GGGXPPXXGGGGXPPXXXXXXGGGXXGXGGG-GGA 524
G R G GG RGG GGG GG G GG G GG GGA
Sbjct: 23 GGRGGFGGG---RGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGA 71
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.58
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 5/50 (10%)
Frame = +3
Query: 525 APPPPPXPXXPPPXXXXXXGGXPPPPXXG-----GXPPPPPRXXXPPGXP 659
APPPPP P PP P PPPP PP P
Sbjct: 237 APPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
Score = 28.3 bits (60), Expect = 1.8
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = +2
Query: 380 PXNXGKXPPXPPPXPPXFPPXXGGXGGGFXXXXXXXXXXXXGXGVXXXXPPPPPXXPXPP 559
P P PPP PP PP G V PP P P P
Sbjct: 229 PKQADPLPAPPPPPPPTLPPQSTNTS---QLPMPSRNVNNLGSQVNIPPPPATPSQPPRP 285
Query: 560 P 562
P
Sbjct: 286 P 286
Score = 24.2 bits (50), Expect(2) = 2.3
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 877 PPXXNPXPXPPPP 915
P NP P PPPP
Sbjct: 184 PSDYNPPPPPPPP 196
Score = 21.8 bits (44), Expect(2) = 2.3
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = +1
Query: 892 PXPXPPPPXGXGGXXPNPPRXXXPAR 969
P P PPPP N + P+R
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMPSR 261
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 29.9 bits (64), Expect = 0.58
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = -3
Query: 661 RGXPGGXXXRGGGGGXPPXXGG--GGXPPXXXXXXGGGXXGXGGGG 530
+G G RGG GG GG GG GGG G GGG
Sbjct: 128 KGARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
Score = 27.1 bits (57), Expect = 4.1
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = -3
Query: 670 GXRRGXPGGXXXRGGGGGXPPXXGGGGXPPXXXXXXGGGXXGXGG 536
G RG GG G GGG GGG GG G G
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
Score = 26.2 bits (55), Expect = 7.1
Identities = 19/47 (40%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Frame = -3
Query: 661 RGXPGGXXXRGGGGGXPPXXGG---GGXPPXXXXXXGGGXXGXGGGG 530
RG GG RGG GG GG GG GGG G GG
Sbjct: 137 RGGRGGF--RGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGG 181
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 1.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 725 PPPPPPPXXTXXPXPXPP 778
PPPPPPP P PP
Sbjct: 10 PPPPPPPGFEPPSQPPPP 27
Score = 29.1 bits (62), Expect = 1.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 591 PPPPXXGGXPPPPPRXXXPPG 653
PPPP G PP P PPG
Sbjct: 11 PPPPPPGFEPPSQPPPPPPPG 31
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 725 PPPPPPPXXTXXPXPXPP 778
PPPPPPP P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPP 26
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 528 PPPPPXPXXPPPXXXXXXGGXPPPP 602
PP P P PPP PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 880 PXXNPXPXPPPPXGXGGXXPNPP 948
P NP P PPPP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPP 27
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 531 PPPPXPXXPPPXXXXXXGGXPPPPXXG 611
PP P PPP PPPP G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +3
Query: 534 PPPXPXXPPPXXXXXXGGXPPPPXXGG 614
PP P PPP PPPP G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 27.5 bits (58), Expect = 3.1
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Frame = +2
Query: 713 GXXXPPPPPPP-XXTXXPXPXPPXG 784
G PPPPPP P P PP G
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPG 31
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Frame = +2
Query: 344 TTAP-PGXGLXXAPXNXGKXPPXPPPXP 424
TT P G + P G PP PPP P
Sbjct: 336 TTTPFAGNQVMPTPQVQGSRPPPPPPMP 363
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 392 GKXPPXPPPXPPXFPPXXGGXGGGF 466
G P PPP PP PP GG F
Sbjct: 939 GVMPAFPPPPPP-PPPLVSAAGGKF 962
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,873,613
Number of Sequences: 5004
Number of extensions: 36005
Number of successful extensions: 732
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 386
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 509282430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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