Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP11_F_M10
(934 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 114 7e-26
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 111 9e-25
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 99 4e-21
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 95 6e-20
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 94 1e-19
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 85 7e-17
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 54 1e-07
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 54 1e-07
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 54 1e-07
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 50 2e-06
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 49 5e-06
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 49 5e-06
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 49 5e-06
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 49 5e-06
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 49 5e-06
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 49 5e-06
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 49 5e-06
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 49 5e-06
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 49 5e-06
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 47 2e-05
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 46 3e-05
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 45 7e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 42 5e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 42 6e-04
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 41 0.001
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 41 0.001
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 41 0.001
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 41 0.001
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 41 0.001
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 40 0.002
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 40 0.002
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 40 0.002
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 40 0.003
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 40 0.003
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 40 0.003
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 40 0.003
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 39 0.004
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 39 0.004
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 39 0.006
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 38 0.008
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 38 0.008
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 38 0.014
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 38 0.014
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 38 0.014
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 38 0.014
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 37 0.018
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 36 0.031
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 36 0.031
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 36 0.055
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 34 0.13
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 34 0.17
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z73971-6|CAD21702.1| 74|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z73971-7|CAE17751.1| 74|Caenorhabditis elegans Hypothetical pr... 28 8.3
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 114 bits (275), Expect = 7e-26
Identities = 53/114 (46%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Frame = +2
Query: 371 LEFTCHXXXXXXXXXMNKRVVLDKEMKVSWATSPAXQP-KTDTSNHHHIFXGDLSPEIET 547
+EF+ H MNKR++LD+EMKV+WA P Q K DT+ H H+F GDLS E++
Sbjct: 89 VEFSDHGQASQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDN 148
Query: 548 XILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAMNGXVAG 709
LRE F P G++S+ +++RD T KS GY FVS+ K+ +A AI MNG G
Sbjct: 149 QKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLG 202
Score = 53.6 bits (123), Expect = 2e-07
Identities = 30/64 (46%), Positives = 36/64 (56%)
Frame = +1
Query: 217 NMGDESHPKTLYVGNLDPSVTEVXXCTWFGQXGDVQGCXIIREPANDPYAFSRVYVSHGG 396
N DE P+TLYVGNLD +VTE T F Q G V +I + +NDPYAF + HG
Sbjct: 40 NGSDE--PRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVE-FSDHGQ 96
Query: 397 GHSA 408
A
Sbjct: 97 ASQA 100
Score = 32.7 bits (71), Expect = 0.39
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
++ G+++ E I R+ FA G I+ RI K GYAFV F K A AI M
Sbjct: 243 VYVGNIASLTEDEI-RQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 295
Query: 692 NGXVAG 709
N G
Sbjct: 296 NNQDVG 301
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 111 bits (266), Expect = 9e-25
Identities = 50/99 (50%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Frame = +2
Query: 416 MNKRVVLDKEMKVSWATSPAXQP-KTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISN 592
MNKR++LD+EMKV+WA P Q K DT+ H H+F GDLS E++ LRE F P G++S+
Sbjct: 1 MNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSD 60
Query: 593 CRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAMNGXVAG 709
+++RD T KS GY FVS+ K+ +A AI MNG G
Sbjct: 61 AKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLG 99
Score = 32.7 bits (71), Expect = 0.39
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
++ G+++ E I R+ FA G I+ RI K GYAFV F K A AI M
Sbjct: 140 VYVGNIASLTEDEI-RQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 192
Query: 692 NGXVAG 709
N G
Sbjct: 193 NNQDVG 198
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 99.1 bits (236), Expect = 4e-21
Identities = 46/99 (46%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Frame = +2
Query: 416 MNKRVVLDKEMKVSWATSPAXQP-KTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISN 592
+ K V+ EMKV+WA P Q K DT+ H H+F GDLS E++ LRE F P G++S+
Sbjct: 72 VTKTKVIFDEMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSD 131
Query: 593 CRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAMNGXVAG 709
+++RD T KS GY FVS+ K+ +A AI MNG G
Sbjct: 132 AKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLG 170
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = +1
Query: 217 NMGDESHPKTLYVGNLDPSVTEVXXCTWFGQXGDVQGCXII 339
N DE P+TLYVGNLD +VTE T F Q G V +I
Sbjct: 40 NGSDE--PRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVI 78
Score = 32.7 bits (71), Expect = 0.39
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
++ G+++ E I R+ FA G I+ RI K GYAFV F K A AI M
Sbjct: 211 VYVGNIASLTEDEI-RQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 263
Query: 692 NGXVAG 709
N G
Sbjct: 264 NNQDVG 269
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 95.1 bits (226), Expect = 6e-20
Identities = 43/89 (48%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Frame = +2
Query: 446 MKVSWATSPAXQP-KTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTL 622
MKV+WA P Q K DT+ H H+F GDLS E++ LRE F P G++S+ +++RD T
Sbjct: 1 MKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTT 60
Query: 623 KSTGYAFVSFVKKADAXAAIHAMNGXVAG 709
KS GY FVS+ K+ +A AI MNG G
Sbjct: 61 KSKGYGFVSYPKREEAERAIEQMNGQWLG 89
Score = 32.7 bits (71), Expect = 0.39
Identities = 24/66 (36%), Positives = 31/66 (46%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
++ G+++ E I R+ FA G I+ RI K GYAFV F K A AI M
Sbjct: 130 VYVGNIASLTEDEI-RQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 182
Query: 692 NGXVAG 709
N G
Sbjct: 183 NNQDVG 188
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 93.9 bits (223), Expect = 1e-19
Identities = 49/117 (41%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
Frame = +2
Query: 371 LEFTCHXXXXXXXXXMNKRVVLDKEMKVSWATSPAX----QPKTDTSNHHHIFXGDLSPE 538
+EF+ H N R +L+KEM V+WA P + K +TS H H+F GDL E
Sbjct: 83 VEFSDHNQATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSE 142
Query: 539 IETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAMNGXVAG 709
I++ LRE F GE+S +I+RD T K GY FVS+ ++ DA AI MNG G
Sbjct: 143 IDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLG 199
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +1
Query: 238 PKTLYVGNLDPSVTEVXXCTWFGQXGDVQGCXIIREPANDPYAF 369
P+TL+V NLDP++T+ T F Q G V II E NDPYAF
Sbjct: 39 PRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAF 82
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 602 VRDPQTLKSTGYAFVSFVKKADAXAAIHAMNGXVAGIKI 718
+ + +T K GYAFV F K A AI MN G +I
Sbjct: 281 INEVRTFKIQGYAFVKFETKESAARAIVQMNNADIGGQI 319
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 85.0 bits (201), Expect = 7e-17
Identities = 39/94 (41%), Positives = 55/94 (58%)
Frame = +2
Query: 428 VVLDKEMKVSWATSPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVR 607
+VL + + A+ P + + DTS H H+F GDLS ++ +L+ F GE+S +++R
Sbjct: 109 IVLQESAVLHSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIR 168
Query: 608 DPQTLKSTGYAFVSFVKKADAXAAIHAMNGXVAG 709
D QT KS GY FVSF K +A AI MNG G
Sbjct: 169 DVQTQKSKGYGFVSFPNKQNAENAIAGMNGKWIG 202
Score = 36.7 bits (81), Expect = 0.024
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
++ G++S + LR+ F+ G+I+ RI K+ YAFV + KK A AI M
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRI------FKTQRYAFVRYEKKECATKAIMEM 292
Query: 692 NG 697
NG
Sbjct: 293 NG 294
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
++ GDL P++ IL E F+ G + + R+ RD T S GYA+V+F + ADA A+ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 692 N 694
N
Sbjct: 94 N 94
Score = 42.3 bits (95), Expect = 5e-04
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 416 MNKRVVLDKEMKVSWATSPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNC 595
MN + K M++ W+ ++ N IF +L I+ + + F+ G I +C
Sbjct: 93 MNFEALHGKPMRIMWSQRDPAMRRSGAGN---IFIKNLDKVIDNKSIYDTFSLFGNILSC 149
Query: 596 RIVRDPQTLKSTGYAFVSFVKKADAXAAIHAMNG-XVAGIKI 718
++ D S GY FV F + A AI +NG +AG K+
Sbjct: 150 KVAIDEDGF-SKGYGFVHFETEEAAQNAIQKVNGMLLAGKKV 190
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
++ GDL P++ IL E F+ G + + R+ RD T S GYA+V+F + ADA A+ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 692 N 694
N
Sbjct: 94 N 94
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 54.0 bits (124), Expect = 1e-07
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
++ GDL P++ IL E F+ G + + R+ RD T S GYA+V+F + ADA A+ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 692 N 694
N
Sbjct: 94 N 94
Score = 42.3 bits (95), Expect = 5e-04
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 416 MNKRVVLDKEMKVSWATSPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNC 595
MN + K M++ W+ ++ N IF +L I+ + + F+ G I +C
Sbjct: 93 MNFEALHGKPMRIMWSQRDPAMRRSGAGN---IFIKNLDKVIDNKSIYDTFSLFGNILSC 149
Query: 596 RIVRDPQTLKSTGYAFVSFVKKADAXAAIHAMNG-XVAGIKI 718
++ D S GY FV F + A AI +NG +AG K+
Sbjct: 150 KVAIDEDGF-SKGYGFVHFETEEAAQNAIQKVNGMLLAGKKV 190
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +2
Query: 482 PKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKK 661
P T + ++ GDL P++ +L E F+ G + + R+ RD + S GYA+V+F +
Sbjct: 49 PPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQP 108
Query: 662 ADAXAAIHAMN 694
ADA A+ MN
Sbjct: 109 ADAERALDTMN 119
Score = 44.8 bits (101), Expect = 9e-05
Identities = 27/100 (27%), Positives = 47/100 (47%)
Frame = +2
Query: 416 MNKRVVLDKEMKVSWATSPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNC 595
MN V+ + M++ W+ P + + +IF +L I+ + + F+ G I +C
Sbjct: 118 MNFEVIHGRPMRIMWSQR---DPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSC 174
Query: 596 RIVRDPQTLKSTGYAFVSFVKKADAXAAIHAMNGXVAGIK 715
++ D + S GY FV F + A AI +NG + K
Sbjct: 175 KVATDDEG-NSKGYGFVHFETEHSAQTAIEKVNGMLLSDK 213
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/71 (35%), Positives = 40/71 (56%)
Frame = +2
Query: 482 PKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKK 661
P T + ++ GDL P++ +L E F+ G + + R+ RD + S GYA+V+F +
Sbjct: 49 PPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQP 108
Query: 662 ADAXAAIHAMN 694
ADA A+ MN
Sbjct: 109 ADAERALDTMN 119
Score = 44.8 bits (101), Expect = 9e-05
Identities = 27/100 (27%), Positives = 47/100 (47%)
Frame = +2
Query: 416 MNKRVVLDKEMKVSWATSPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNC 595
MN V+ + M++ W+ P + + +IF +L I+ + + F+ G I +C
Sbjct: 118 MNFEVIHGRPMRIMWSQR---DPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSC 174
Query: 596 RIVRDPQTLKSTGYAFVSFVKKADAXAAIHAMNGXVAGIK 715
++ D + S GY FV F + A AI +NG + K
Sbjct: 175 KVATDDEG-NSKGYGFVHFETEHSAQTAIEKVNGMLLSDK 213
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +2
Query: 554 LREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAMNG 697
+R F GEI +C++VRD T +S GY FV++V++ DA A+ + NG
Sbjct: 58 VRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNG 105
Score = 45.2 bits (102), Expect = 7e-05
Identities = 28/89 (31%), Positives = 42/89 (47%)
Frame = +2
Query: 437 DKEMKVSWATSPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQ 616
+K +KVS+A +P D +++ + + L F P G+I RI+ D
Sbjct: 110 NKTIKVSYA-----RPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNV 164
Query: 617 TLKSTGYAFVSFVKKADAXAAIHAMNGXV 703
T S G FV F KK +A AI +NG +
Sbjct: 165 TGLSKGVGFVRFDKKDEADVAIKTLNGSI 193
Score = 43.6 bits (98), Expect = 2e-04
Identities = 27/79 (34%), Positives = 45/79 (56%)
Frame = +2
Query: 461 ATSPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYA 640
A+ A P +DT+ + +F +LS + + +L + F+ G I N +I+RD T + GYA
Sbjct: 360 ASVAATLPPSDTAGYC-LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYA 417
Query: 641 FVSFVKKADAXAAIHAMNG 697
FVS +A A+ ++NG
Sbjct: 418 FVSMSNYTEAYNAMLSLNG 436
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 50.4 bits (115), Expect = 2e-06
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Frame = +2
Query: 422 KRVVLDKEMKVSWATSPAXQPKTDTS------NHHHIFXGDLSPEIETXILREXFAPXGE 583
K+ + +++ K + S Q D S N +F GDL E+ +L + F
Sbjct: 169 KKKIKEQQAKKKFVRSGGGQVWEDPSLAEWDENDFRVFCGDLGNEVSDELLAKAFRKYPS 228
Query: 584 ISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAMNGXVAG 709
++VR+ +T KS GY FVSF D A+ M+G G
Sbjct: 229 FQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREMDGKYVG 270
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/69 (39%), Positives = 37/69 (53%)
Frame = +2
Query: 488 TDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKAD 667
T+ N +F G LS + LRE FA G I +C ++RD Q KS G AFV+F ++
Sbjct: 136 TENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSC 194
Query: 668 AXAAIHAMN 694
A A M+
Sbjct: 195 AVVATKEMH 203
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +2
Query: 467 SPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFV 646
SP+ +P TD +F G + + R F G + +C I+RD T S G FV
Sbjct: 46 SPS-EPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFV 101
Query: 647 SFVKKADAXAAIHAMN 694
+F + DA A A++
Sbjct: 102 TFYHRKDAIEAQGALH 117
Score = 35.5 bits (78), Expect = 0.055
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = +2
Query: 509 HIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHA 688
++F L + L FAP G I + ++ D T S + FVS+ A AI A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 689 MNGXVAGIK 715
MNG G K
Sbjct: 560 MNGFQIGSK 568
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/69 (39%), Positives = 37/69 (53%)
Frame = +2
Query: 488 TDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKAD 667
T+ N +F G LS + LRE FA G I +C ++RD Q KS G AFV+F ++
Sbjct: 136 TENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSC 194
Query: 668 AXAAIHAMN 694
A A M+
Sbjct: 195 AVVATKEMH 203
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +2
Query: 467 SPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFV 646
SP+ +P TD +F G + + R F G + +C I+RD T S G FV
Sbjct: 46 SPS-EPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFV 101
Query: 647 SFVKKADAXAAIHAMN 694
+F + DA A A++
Sbjct: 102 TFYHRKDAIEAQGALH 117
Score = 35.5 bits (78), Expect = 0.055
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = +2
Query: 509 HIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHA 688
++F L + L FAP G I + ++ D T S + FVS+ A AI A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 689 MNGXVAGIK 715
MNG G K
Sbjct: 560 MNGFQIGSK 568
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/69 (39%), Positives = 37/69 (53%)
Frame = +2
Query: 488 TDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKAD 667
T+ N +F G LS + LRE FA G I +C ++RD Q KS G AFV+F ++
Sbjct: 136 TENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSC 194
Query: 668 AXAAIHAMN 694
A A M+
Sbjct: 195 AVVATKEMH 203
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +2
Query: 467 SPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFV 646
SP+ +P TD +F G + + R F G + +C I+RD T S G FV
Sbjct: 46 SPS-EPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFV 101
Query: 647 SFVKKADAXAAIHAMN 694
+F + DA A A++
Sbjct: 102 TFYHRKDAIEAQGALH 117
Score = 35.5 bits (78), Expect = 0.055
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = +2
Query: 509 HIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHA 688
++F L + L FAP G I + ++ D T S + FVS+ A AI A
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 488
Query: 689 MNGXVAGIK 715
MNG G K
Sbjct: 489 MNGFQIGSK 497
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/69 (39%), Positives = 37/69 (53%)
Frame = +2
Query: 488 TDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKAD 667
T+ N +F G LS + LRE FA G I +C ++RD Q KS G AFV+F ++
Sbjct: 136 TENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSC 194
Query: 668 AXAAIHAMN 694
A A M+
Sbjct: 195 AVVATKEMH 203
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +2
Query: 467 SPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFV 646
SP+ +P TD +F G + + R F G + +C I+RD T S G FV
Sbjct: 46 SPS-EPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFV 101
Query: 647 SFVKKADAXAAIHAMN 694
+F + DA A A++
Sbjct: 102 TFYHRKDAIEAQGALH 117
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/69 (39%), Positives = 37/69 (53%)
Frame = +2
Query: 488 TDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKAD 667
T+ N +F G LS + LRE FA G I +C ++RD Q KS G AFV+F ++
Sbjct: 136 TENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSC 194
Query: 668 AXAAIHAMN 694
A A M+
Sbjct: 195 AVVATKEMH 203
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +2
Query: 467 SPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFV 646
SP+ +P TD +F G + + R F G + +C I+RD T S G FV
Sbjct: 46 SPS-EPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFV 101
Query: 647 SFVKKADAXAAIHAMN 694
+F + DA A A++
Sbjct: 102 TFYHRKDAIEAQGALH 117
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 48.8 bits (111), Expect = 5e-06
Identities = 27/69 (39%), Positives = 37/69 (53%)
Frame = +2
Query: 488 TDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKAD 667
T+ N +F G LS + LRE FA G I +C ++RD Q KS G AFV+F ++
Sbjct: 136 TENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFVTFTNRSC 194
Query: 668 AXAAIHAMN 694
A A M+
Sbjct: 195 AVVATKEMH 203
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +2
Query: 467 SPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFV 646
SP+ +P TD +F G + + R F G + +C I+RD T S G FV
Sbjct: 46 SPS-EPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFV 101
Query: 647 SFVKKADAXAAIHAMN 694
+F + DA A A++
Sbjct: 102 TFYHRKDAIEAQGALH 117
Score = 35.5 bits (78), Expect = 0.055
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = +2
Query: 509 HIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHA 688
++F L + L FAP G I + ++ D T S + FVS+ A AI A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 689 MNGXVAGIK 715
MNG G K
Sbjct: 560 MNGFQIGSK 568
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +2
Query: 491 DTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADA 670
+ N IF G L+ ++RE ++ GEI++ ++RDP T +S G+ FV+F K +
Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query: 671 XAAI 682
AA+
Sbjct: 78 DAAM 81
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +2
Query: 491 DTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADA 670
+ N IF G L+ ++RE ++ GEI++ ++RDP T +S G+ FV+F K +
Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query: 671 XAAI 682
AA+
Sbjct: 78 DAAM 81
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +2
Query: 491 DTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADA 670
+ N IF G L+ ++RE ++ GEI++ ++RDP T +S G+ FV+F K +
Sbjct: 18 EPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEV 77
Query: 671 XAAI 682
AA+
Sbjct: 78 DAAM 81
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
+F G LS + LR+ F GE++ C ++RDP T ++ G+ F++FV + ++
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 692 NGXVAGIKI 718
+ G KI
Sbjct: 107 EHELDGKKI 115
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 196 STDYD*ANMGDESHPKTLYVGNLDPSVTEVXXCTWFGQXGDVQGCXIIREPA 351
+ D D + G + P +++G L T +FG+ G+V C ++R+PA
Sbjct: 31 NADSDDGSHGSQD-PGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPA 81
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 47.2 bits (107), Expect = 2e-05
Identities = 21/69 (30%), Positives = 37/69 (53%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
+F G LS + LR+ F GE++ C ++RDP T ++ G+ F++FV + ++
Sbjct: 47 MFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNNR 106
Query: 692 NGXVAGIKI 718
+ G KI
Sbjct: 107 EHELDGKKI 115
Score = 32.7 bits (71), Expect = 0.39
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 196 STDYD*ANMGDESHPKTLYVGNLDPSVTEVXXCTWFGQXGDVQGCXIIREPA 351
+ D D + G + P +++G L T +FG+ G+V C ++R+PA
Sbjct: 31 NADSDDGSHGSQD-PGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPA 81
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 509 HIFXGDLSPEIETXILREXFAPXGEISNC-RIVRDPQTLKSTGYAFVSFVKKADAXAAIH 685
+IF G+L PE++ +L + F+ G I +I+RD + S G+AF++F + A+
Sbjct: 101 NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 160
Query: 686 AMNG 697
AMNG
Sbjct: 161 AMNG 164
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 46.4 bits (105), Expect = 3e-05
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +2
Query: 509 HIFXGDLSPEIETXILREXFAPXGEISNC-RIVRDPQTLKSTGYAFVSFVKKADAXAAIH 685
+IF G+L PE++ +L + F+ G I +I+RD + S G+AF++F + A+
Sbjct: 111 NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 170
Query: 686 AMNG 697
AMNG
Sbjct: 171 AMNG 174
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 45.2 bits (102), Expect = 7e-05
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 506 HHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIH 685
H I+ G + ++ L F G+I + R++ DP + S GYAFV++ K DA AA
Sbjct: 200 HEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAK 259
Query: 686 AMNG 697
+G
Sbjct: 260 TYDG 263
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
+F G++S ++ +R F+ G + + ++V D +T K GY F+ F A AI +
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 692 NG 697
NG
Sbjct: 80 NG 81
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 43.2 bits (97), Expect = 3e-04
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
++ G+ + L F+ G+I+N RIV D +T + G+AF+ F ++ A A+ M
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 692 NG 697
NG
Sbjct: 67 NG 68
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 566 FAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAMNG 697
FA G ++N RIV D +T + G+AFV F ++A A A+ +NG
Sbjct: 26 FAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQLNG 69
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 42.3 bits (95), Expect = 5e-04
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +2
Query: 416 MNKRVVLDKEMKVSWATSPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNC 595
MN + K M++ W+ ++ N IF +L I+ + + F+ G I +C
Sbjct: 30 MNFEALHGKPMRIMWSQRDPAMRRSGAGN---IFIKNLDKVIDNKSIYDTFSLFGNILSC 86
Query: 596 RIVRDPQTLKSTGYAFVSFVKKADAXAAIHAMNG-XVAGIKI 718
++ D S GY FV F + A AI +NG +AG K+
Sbjct: 87 KVAIDEDGF-SKGYGFVHFETEEAAQNAIQKVNGMLLAGKKV 127
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
++ G+ + L F+ G +SN RIV D +T + G+AFV F ++A A A+
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQF 65
Query: 692 NG 697
NG
Sbjct: 66 NG 67
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 554 LREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAI 682
+RE ++ GEI++ ++RDP T +S G+ FV+F K + AA+
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAM 43
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 41.1 bits (92), Expect = 0.001
Identities = 17/43 (39%), Positives = 29/43 (67%)
Frame = +2
Query: 554 LREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAI 682
+RE ++ GEI++ ++RDP T +S G+ FV+F K + AA+
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAM 43
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
I+ G +S EI +LR F P G I + + DP T +AFV + A A +M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 692 NGXVAG 709
NG + G
Sbjct: 164 NGQMLG 169
Score = 36.3 bits (80), Expect = 0.031
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = +2
Query: 491 DTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADA 670
D + ++ + P++ L+ F GEI C++ R P G+ ++ F
Sbjct: 202 DAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQ 261
Query: 671 XAAIHAMN 694
AI MN
Sbjct: 262 SEAIAGMN 269
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
I+ G +S EI +LR F P G I + + DP T +AFV + A A +M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 692 NGXVAG 709
NG + G
Sbjct: 164 NGQMLG 169
Score = 36.3 bits (80), Expect = 0.031
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = +2
Query: 491 DTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADA 670
D + ++ + P++ L+ F GEI C++ R P G+ ++ F
Sbjct: 202 DAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQ 261
Query: 671 XAAIHAMN 694
AI MN
Sbjct: 262 SEAIAGMN 269
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 40.7 bits (91), Expect = 0.001
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
I+ G +S EI +LR F P G I + + DP T +AFV + A A +M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 692 NGXVAG 709
NG + G
Sbjct: 164 NGQMLG 169
Score = 36.3 bits (80), Expect = 0.031
Identities = 16/68 (23%), Positives = 28/68 (41%)
Frame = +2
Query: 491 DTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADA 670
D + ++ + P++ L+ F GEI C++ R P G+ ++ F
Sbjct: 202 DAKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQ 261
Query: 671 XAAIHAMN 694
AI MN
Sbjct: 262 SEAIAGMN 269
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/77 (28%), Positives = 35/77 (45%)
Frame = +2
Query: 467 SPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFV 646
+PA P+ + +F G ++ E LR F G+I +V D + K GYAF+
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 647 SFVKKADAXAAIHAMNG 697
+ KA+ A +G
Sbjct: 150 EYSDKAEMHTAYKKADG 166
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
IF G +SPE+ L F GE++ ++ D +S G+AFV F A+ A
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 692 NGXVAG 709
+ G
Sbjct: 91 EQTIKG 96
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
IF G +SPE+ L F GE++ ++ D +S G+AFV F A+ A
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAAR 90
Query: 692 NGXVAG 709
+ G
Sbjct: 91 EQTIKG 96
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/67 (25%), Positives = 25/67 (37%)
Frame = +1
Query: 253 VGNLDPSVTEVXXCTWFGQXGDVQGCXIIREPANDPYAFSRVYVSHGGGHSAGRHEQASG 432
+G + T W+G Q + + Y S G +S ++QA G
Sbjct: 224 IGAMPYGATGAAWGDWYGNGYYGQQGAAHHNNSGSSQGYGSGYQSFAGNNSGFDYQQAQG 283
Query: 433 PRQGNEG 453
RQGN G
Sbjct: 284 ARQGNNG 290
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 39.9 bits (89), Expect = 0.003
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +2
Query: 509 HIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHA 688
++F L E L + FAP G I + ++ D T +S + FVS+ + AAI A
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 689 MNGXVAGIK 715
MNG G+K
Sbjct: 490 MNGFQIGMK 498
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 39.9 bits (89), Expect = 0.003
Identities = 24/69 (34%), Positives = 35/69 (50%)
Frame = +2
Query: 509 HIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHA 688
++F L E L + FAP G I + ++ D T +S + FVS+ + AAI A
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 689 MNGXVAGIK 715
MNG G+K
Sbjct: 490 MNGFQIGMK 498
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 39.9 bits (89), Expect = 0.003
Identities = 23/68 (33%), Positives = 29/68 (42%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
IF G L L E F G+I ++ D T KS GY FV+ +A A A
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 692 NGXVAGIK 715
N + G K
Sbjct: 97 NPIIDGRK 104
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
I+ G LS + + F+ GE+ N ++RD T KS G+AF+ + + A+
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 692 NG 697
NG
Sbjct: 100 NG 101
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +2
Query: 482 PKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKK 661
PK + +F G+L E++ L+E F+P G+I+ C L G+AF+ +
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-------YLSGKGFAFLRLDTR 160
Query: 662 ADAXAAIHAMNGXV 703
A A +A A++G +
Sbjct: 161 AHAESAKEAIDGRI 174
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 39.1 bits (87), Expect = 0.004
Identities = 22/74 (29%), Positives = 38/74 (51%)
Frame = +2
Query: 482 PKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKK 661
PK + +F G+L E++ L+E F+P G+I+ C L G+AF+ +
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-------YLSGKGFAFLRLDTR 160
Query: 662 ADAXAAIHAMNGXV 703
A A +A A++G +
Sbjct: 161 AHAESAKEAIDGRI 174
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/41 (51%), Positives = 24/41 (58%)
Frame = +1
Query: 217 NMGDESHPKTLYVGNLDPSVTEVXXCTWFGQXGDVQGCXII 339
N DE P+TLYVGNLD +VTE T F Q G V +I
Sbjct: 40 NGSDE--PRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVI 78
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 38.3 bits (85), Expect = 0.008
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +2
Query: 494 TSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAX 673
T + +++ L P +LRE + G I++ + + D T GY FV F A
Sbjct: 103 TPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAA 162
Query: 674 AAIHAMN 694
AA+ +N
Sbjct: 163 AAVDGLN 169
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 38.3 bits (85), Expect = 0.008
Identities = 24/76 (31%), Positives = 36/76 (47%)
Frame = +2
Query: 467 SPAXQPKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFV 646
SP+ +P TD +F G + + R F G + +C I+RD T S G FV
Sbjct: 46 SPS-EPDTDAIK---MFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFV 101
Query: 647 SFVKKADAXAAIHAMN 694
+F + DA A A++
Sbjct: 102 TFYHRKDAIEAQGALH 117
Score = 37.1 bits (82), Expect = 0.018
Identities = 20/49 (40%), Positives = 26/49 (53%)
Frame = +2
Query: 488 TDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTG 634
T+ N +F G LS + LRE FA G I +C ++RD Q KS G
Sbjct: 136 TENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRG 183
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +2
Query: 509 HIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHA 688
+++ L P +LRE + G I++ + + D T GY FV F A AA+
Sbjct: 82 NLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVDG 141
Query: 689 MN 694
+N
Sbjct: 142 LN 143
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIH 685
+F G LS + L F+ G + + ++RDP T S G+ FV+F A +A++
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIH 685
+F G LS + L F+ G + + ++RDP T S G+ FV+F A +A++
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 37.5 bits (83), Expect = 0.014
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIH 685
+F G LS + L F+ G + + ++RDP T S G+ FV+F A +A++
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 37.1 bits (82), Expect = 0.018
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXF-APXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAI 682
IF G+L EI L F A G + RIVRD T K G+AFV+F + + A+
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLAL 305
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.3 bits (80), Expect = 0.031
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
+F L+P L F+ G+I+NC IVRD ++ S YAF+ F A M
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 692 -NGXVAGIKIH 721
N + +IH
Sbjct: 303 DNVLIDDRRIH 313
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.3 bits (80), Expect = 0.031
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
+F L+P L F+ G+I+NC IVRD ++ S YAF+ F A M
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 692 -NGXVAGIKIH 721
N + +IH
Sbjct: 303 DNVLIDDRRIH 313
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 36.3 bits (80), Expect = 0.031
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
+F L+P L F+ G+I+NC IVRD ++ S YAF+ F A M
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 692 -NGXVAGIKIH 721
N + +IH
Sbjct: 234 DNVLIDDRRIH 244
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 35.5 bits (78), Expect = 0.055
Identities = 23/69 (33%), Positives = 31/69 (44%)
Frame = +2
Query: 509 HIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHA 688
++F L + L FAP G I + ++ D T S + FVS+ A AI A
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 395
Query: 689 MNGXVAGIK 715
MNG G K
Sbjct: 396 MNGFQIGSK 404
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 34.3 bits (75), Expect = 0.13
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +2
Query: 554 LREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAMNGXV 703
L+ F GE+S ++V D +T G+A V FV A AA A++G V
Sbjct: 295 LQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSALDGYV 344
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 33.9 bits (74), Expect = 0.17
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 482 PKTDTSNHHHIFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKK 661
PK + +F G+L E++ L+E F+P G+I+ C L G+AF+ +
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAEC-------YLSGKGFAFLRLISN 160
Query: 662 A 664
A
Sbjct: 161 A 161
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 33.1 bits (72), Expect = 0.29
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 566 FAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAMNG 697
F G + R+ R+ +T G+A+V F KA A A +MNG
Sbjct: 52 FRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESMNG 95
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
I+ G L+ + + F G+I RD L G+ FV F K DA A+H +
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI------RD--VLLKNGFGFVEFDDKRDAEDAVHDL 56
Query: 692 NGXVAG 709
NG G
Sbjct: 57 NGKELG 62
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
I+ G L+ + + F G+I RD L G+ FV F K DA A+H +
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI------RD--VLLKNGFGFVEFDDKRDAEDAVHDL 56
Query: 692 NGXVAG 709
NG G
Sbjct: 57 NGKELG 62
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/66 (31%), Positives = 29/66 (43%)
Frame = +2
Query: 512 IFXGDLSPEIETXILREXFAPXGEISNCRIVRDPQTLKSTGYAFVSFVKKADAXAAIHAM 691
I+ G L+ + + F G+I RD L G+ FV F K DA A+H +
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQI------RD--VLLKNGFGFVEFDDKRDAEDAVHDL 56
Query: 692 NGXVAG 709
NG G
Sbjct: 57 NGKELG 62
>Z73971-6|CAD21702.1| 74|Caenorhabditis elegans Hypothetical
protein C50H2.10 protein.
Length = 74
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 328 CXIIREPANDPYAFSRVYVSHGGGHSAGRHEQASGPRQGNEG 453
C I++E + Y +S Y S+ GG+ G + +G G G
Sbjct: 15 CSIVQETSAQYYGYSSYYPSYYGGYGPGAYNGYNGGAYGYGG 56
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = +1
Query: 244 TLYVGNLDPS----VTEVXXCTWFGQXGDVQGCXIIRE 345
TLY+GNL PS VTE +F Q GD++ ++ E
Sbjct: 236 TLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTE 273
>Z73971-7|CAE17751.1| 74|Caenorhabditis elegans Hypothetical
protein C50H2.12 protein.
Length = 74
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 328 CXIIREPANDPYAFSRVYVSHGGGHSAGRHEQASGPRQGNEG 453
C I++E + Y +S Y S+ GG+ G + G G G
Sbjct: 15 CSIVQETSAQYYGYSSYYPSYYGGYGLGAYNGYYGGAYGYGG 56
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,986,025
Number of Sequences: 27780
Number of extensions: 236923
Number of successful extensions: 546
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 541
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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