Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP11_F_M03
         (914 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   7.4  
AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase pr...    24   7.4  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   9.8  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   9.8  

>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = +1

Query: 163 LSVEDLHKFLDSFDHVLSDCDGVIWTQDSLPRVGEFFKQMKKRGKTVN 306
           + + DLH   D  +   S C         + RV    KQ+K   KT N
Sbjct: 39  IHINDLHARFDETNQKSSTCTNSKECIAGIARVYHTIKQLKSEYKTKN 86


>AJ000034-1|CAA03870.1|   98|Anopheles gambiae 5'-nucleotidase
           protein.
          Length = 98

 Score = 23.8 bits (49), Expect = 7.4
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = +1

Query: 163 LSVEDLHKFLDSFDHVLSDCDGVIWTQDSLPRVGEFFKQMKKRGKTVN 306
           + + DLH   D  +   S C         + RV    KQ+K   KT N
Sbjct: 39  IHINDLHARFDETNQKSSTCTNSKECIAGIARVYHTIKQLKSEYKTKN 86


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 478 KRVLEAHGFKCKEGPDLGPEYYGEYIQYLEDDEEIGAVV 594
           ++VLE+   + +E  D+   YYG  I+    D+ I   V
Sbjct: 513 RKVLESFLQRGREYADIANAYYGPVIENFNCDKSIYTAV 551


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 15/76 (19%), Positives = 32/76 (42%)
 Frame = -1

Query: 251 KES*VHITPSQSERTWSKESRNLCKSSTLKSNKCLDSIPIMLNTLRLFFCIL*Y*NACAL 72
           KE  +    S+   ++++  R  C ++T+   K + ++ + L     FF       AC++
Sbjct: 17  KEQRIKAAISRERVSFTENLREYCLNTTIHGLKYIGTVSLTLCERAYFFLTFLVVTACSI 76

Query: 71  NLTV*VTXNLKEFPIV 24
                V    +  PI+
Sbjct: 77  YFISNVYIKWQSSPII 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 866,013
Number of Sequences: 2352
Number of extensions: 16921
Number of successful extensions: 29
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99228240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)